Seriola dumerili (greater amberjack): 111225387
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Entry
111225387 CDS
T05606
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor SYF2 isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111225387 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111225387 (syf2)
Spliceosome [BR:
sdu03041
]
Complex B
Other components
Prp19-related factors
111225387 (syf2)
Complex C
111225387 (syf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
111225387
NCBI-ProteinID:
XP_022605940
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MATVVFQVSATVTEEETTDTPASQKREARLRQFRELHFKRNEARKLNHQEVVEEDKRLKL
PSNWEAKKARLEWELTEDQKKKECADRGEDYDRVKLLEITADDAERWERKKKKKNPDTGF
AGYAEAQFRQYQRLTKQIRPDLEGYERQREECGEDFYPTSNSLIHGTHVPTKEGIDRMVE
DVEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtcgtttttcaggtatctgctacagtcactgaagaggaaacgactgatact
cctgcgtcccagaagagagaagcaagactacgacaatttcgagagttacatttcaaacgg
aatgaagcacgtaagcttaatcaccaggaggttgtggaggaggacaagagactgaaactc
ccttccaactgggaggctaagaaagctcgactggagtgggagcttactgaagatcaaaag
aaaaaggaatgtgctgacagaggggaggactatgacagagtgaaattgctggagattact
gctgatgatgcagagcggtgggagaggaagaaaaagaagaagaacccagacacaggattt
gcaggttatgctgaggcccaattccgacagtaccagaggcttacaaagcagatcagacca
gacttagagggctatgagagacagcgggaggaatgtggtgaggacttttaccctacgtcc
aacagcctgatccacgggacacacgtccccacaaaggaaggaattgaccgcatggtggaa
gatgttgagaaacagatcgagaagcgggccaagtacagccgacgcagggcctacaacgac
gacgcagacatcgactacatcaacgagaggaatgccaagttcaacaagaaggcggagcgt
ttctacggcaaatacacagcggagatcaaacaaaacttggagagaggcacggctgtctag
DBGET
integrated database retrieval system
