Seriola dumerili (greater amberjack): 111225453
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Entry
111225453 CDS
T05606
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111225453
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
111225453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
PUF_NOP9
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
111225453
NCBI-ProteinID:
XP_022606060
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MSSRVCKNCGGSDIDVDQARGDAVCMGCGSVLEDNIIVSEVEFVETGGGGSSAVGQFVCS
QDGAKHPSFGDSHLTGMGRESRAQTLQRAKPHINTLGHQLQMNKHCLDTAFNFYRMALTK
HLTRGRKSSHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPA
IDPCLYIPRFAQLLEFGEKNHDVSMTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARAH
EFRRTIKEIVSVVKVCESTLRKRLIEFEDTPTSQLTIEEFMKIDLDQECDPPCFTAGLQK
KKIEQLETELKKKMDDVEDEIHGYQDEIDAELHSSRPKLRGVYAAYAKEERTANDDALST
TSKAADDEEQEEEAELQAVAKHFGKDLGELTLEALIKLEEKRPEEEEENQQQQQQQEEEE
EEDEEGGFPKRKGPSLASILGTMPSAATLGLSESITKCIGDEKENGEYGAADSGELDLSG
IDDSEIELYLLDDKEIKIKTALWMAENSDYLKEQKEKEAKIAKEKELGIYKEKKPRGPAK
RRQPIRASTADEAIEKMLEQKRISSKINYDVLKDLNIKPGASPARKVESVKKEPSATKLT
GRTPKPARAPLSLSTPLSTLGKRLQPFITGQPNKKLAVEQVANSNPLPLPVGAPASGVLV
ESGPVVYDDAAADEDEEEEEETCVSAMELMGSQDYGCDGDYDDGF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgtaagaactgcggcggctcggacatcgatgtggaccaggcgcgc
ggcgatgccgtctgcatgggctgcggctccgtgctggaggacaacatcatcgtgtccgag
gtggagttcgtggagacgggaggcggagggtcatcggccgtcggacagtttgtctgttca
caagatggagccaaacatccctcctttggagactcgcacctcacaggaatgggcagggag
tcccgagcccagactctgcagagagccaaaccgcacatcaacactctgggtcaccagctg
cagatgaacaagcactgtttggacacggctttcaatttctacaggatggcgctcaccaaa
cacctgacccgcggccgcaagtcctcgcacgtcatcgccgcctgtctctacctggtgtgc
cgcaccgagggaacgccacacatgctgctggatctcagcgatctcctgcaggtgaacgtc
tacgtcctgggaagaactttcctcgtcctggccagagagctgtgcatcaacgccccggct
atagacccgtgcctgtatattccccggttcgctcagctgctggagtttggtgagaagaac
cacgacgtctccatgacggcgatgagactggtgcagaggatgaagagggactggatgcac
acgggacggaggccgtcgggactctgcggagcagctcttcttgttgccgctcgtgcgcac
gagtttcgccgcaccatcaaagaaattgtcagcgttgtgaaagtgtgtgagagcacgcta
agaaaaagactgatagagtttgaggacacgcccaccagtcagctgaccatcgaggagttc
atgaagatcgatctggaccaggagtgtgacccgccctgcttcacagctggactacagaag
aagaaaatcgagcagctggagacggagctgaagaaaaagatggatgacgtcgaagatgaa
attcatggctaccaggatgagatcgatgcagagcttcacagcagcagacccaaactgagg
ggagtgtacgccgcctacgccaaagaagagaggacggccaatgacgacgcgctctccacg
acgtctaaagcggcagacgatgaggagcaggaggaggaagccgagcttcaggccgtggcc
aagcactttggcaaagacctcggcgagctcacgctggaggctctgatcaaactagaggag
aagagaccagaggaggaagaggagaaccagcagcagcagcagcagcaggaggaggaggag
gaggaggatgaggagggcggctttccgaagagaaaaggcccatcgctggcgtccatcttg
ggtacgatgccctcagcggccactctgggcctctccgagtccatcaccaagtgcatcgga
gacgagaaggagaacggtgagtatggtgctgccgacagcggggagctggacctgagcggg
atagatgacagcgagatagagctgtatctgctggatgacaaagaaatcaaaatcaagacg
gcgctgtggatggcagaaaactccgactacctcaaagagcagaaagaaaaggaggcgaag
atagcgaaggagaaggagctcggcatctacaaagaaaagaagccaagaggccccgctaag
aggcgtcaaccgatccgagccagcaccgccgacgaggccatcgagaagatgctggagcag
aagaggatctcctccaagatcaactacgacgtcctgaaggacctcaacatcaaacccggc
gccagcccagctcgcaaggtcgagtccgtgaagaaggagccgtctgccaccaagctgacg
ggacgcacccccaaacccgcacgagccccactcagcctcagcacgccgctcagcaccctg
ggaaaaaggttgcagccgttcatcaccggacagcccaacaagaagctggcggtggagcag
gttgccaactccaaccccctgccgctgcccgtgggggcccccgccagcggagtgctggtg
gagagcgggccggtcgtctacgacgatgcagctgctgatgaggatgaggaagaggaggag
gagacttgtgtcagcgccatggagctgatgggcagccaagattacggttgtgacggagac
tatgacgatggattctag
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