Seriola dumerili (greater amberjack): 111225540
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Entry
111225540 CDS
T05606
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
sdu03083
Polycomb repressive complex
sdu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111225540
03083 Polycomb repressive complex
111225540
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111225540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111225540
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111225540
Histone modification proteins
HAT complexes
HATB complex
111225540
HDAC complexes
Sin3A-HDAC complex
111225540
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111225540
PRC2.2
111225540
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111225540
Heterochromatin formation proteins
Other heterochromatin formation proteins
111225540
Chromatin remodeling factors
NuRD complex
111225540
NuRF complex
111225540
NuRF complex (fruit fly)
111225540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
eIF2A
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
111225540
NCBI-ProteinID:
XP_022606198
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MDKGEMAQLHLSEMGGRDTGGDNDVTTTEQQAAFDDAVEERVINEEYKIWKKNTPFLYDL
VMTHALEWPSLTAQWLPDVTRPEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD
ASHYDSEKGENIEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLV
FDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVP
KEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDA
HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET
ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC
SVSEDNIMQVWQMAENIYNDEDPEGAADSEVQA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaggagagatggcgcagctgcatttgagtgagatgggaggaagggacacggga
ggagacaatgacgtcaccaccaccgagcaacaagctgcgtttgacgatgctgtggaggaa
agggtgatcaatgaggagtacaagatctggaagaagaacacccctttcctctatgacctg
gttatgactcacgccctggagtggcccagcctcaccgcccagtggctgccagatgtcacc
agaccagagggtaaagactacagtgtgcacaggctggtcctggggacacacacttctgat
gaacagaatcaccttgtgattgccagtgttcagctcccaaatgatgatgctcagtttgat
gcctcacactatgacagcgagaaaggagaaaatatagagtttggaggttttggttctgta
agtgggaagatagagatagagatcaagatcaaccatgagggagaagtgaacagagcgcgt
tacatgcctcagaatccttgcatcattgccaccaagacccccaccagtgatgtgctggtc
tttgattacacaaagcacccctcgaagcccgacccttcaggagagtgcaccccagatctg
cgcttgagaggccaccagaaggagggctatggcctctcctggaacccaaacctcagtggc
tgtctcctcagtgcctctgatgaccatactatttgcctgtgggacatcagcacagtgccc
aaggaggggaagattgtggatgccaagaccatcttcacaggccacacagcagtggtggag
gatgtctcctggcatttgctccatgagtcactctttggatctgtggctgatgaccagaaa
ctcatgatctgggatacgcggtccaacaacacctccaagcccagccatgcagtggatgcc
cacactgctgaggtcaactgcctgtccttcaatccctacagtgagttcatcctggccact
ggctctgcagataagaccgtggctctttgggacctaaggaatctgaaactaaagctgcac
tcgtttgagtctcacaaagacgaaatcttccaggttcagtggtctcctcataacgagacc
atcctggcctccagcggcacagacagaaggctcaacgtctgggacctcagtaagatcgga
gaggagcagtctccagaagatgctgaggatggccctcctgagctgctgttcatccatgga
ggacacacagctaagatctcagatttctcttggaaccccaacgagccgtgggtcatctgt
tctgtatcagaggacaacatcatgcaagtctggcagatggccgaaaacatctacaatgat
gaagacccagaaggtgctgcagattcagaggttcaagcatga
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integrated database retrieval system
