Seriola dumerili (greater amberjack): 111225774
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Entry
111225774 CDS
T05606
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04020
Calcium signaling pathway
sdu04080
Neuroactive ligand-receptor interaction
sdu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111225774
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111225774
04082 Neuroactive ligand signaling
111225774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111225774
Ion channels [BR:
sdu04040
]
Ligand-gated channels
Glutamate (ionotropic)
111225774
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Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
111225774
NCBI-ProteinID:
XP_022606524
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MALALSVVLKRCGYTTDNVPLGRRAGSGDKSLRPLLLLLLLTVTSSPESCFPHPQPCHIL
ARIGHTVRLGALLPTRQPVRIQNALNRALASLRHQSGGVDTTTSQTPPLLPYNLSLEMVA
RSPAGGDPESLSRSACQDLVVRGVSAVLAFPRSREELIQVEFLSSFLELPFISILEDTEP
LVTKNRFHLQMSARVPPSTLGSLLLAVLQGGEGDRVRGSQGEESWGGAAVICPGWEEGGD
GLLAHLQRHSGSTWHLWDIINLTRITGGGERRGEASEERREDQMEEEALKILSTRFLRSP
SPLSSVLLLGSDPECLSSVLRAAQRLAPSLPALQWIMGYPLSPDSLHTLGGPLGLLAYGE
VGRKPISFYIRDALQLIGRAVTAATMVRPDLALIQNMVNCYDKPNRHELPSSGQYLARFL
SNTSFTGATGLIQVDAGLSRVLSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLVLEGGIL
GLVGGFGSSQGQGLGAGVRGGDGQGDSNIGGRWRPGLSVEGHRLRVVTLVEHPFVFTREV
DEDGLCPAGQLCLDPRTNRSDIIQSLFNQLHNPNTTAADWEGNDLPEDLRKCCYGYCVDL
LEKLAEDMGFTFDLYIVGDGKYGASSGTGRWTGLVGDLLSGTADMAVTSFSINSARSRVI
DFTSPFYSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFG
MTPHGRNRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTA
NLAAVMVGEKTFEQVSGIHDDKLHHPSMGFRFGTVRESSAEDYMKKSFPEMHDYMRRFNQ
PTTPEGVHMLKTDPPALDAFIMDKALLDFEVSIDADCKLLTVGKPFAIEGYGIGLPQGSP
LTRNVSEFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGV
GGALLTLAGEHTFYHLVIPRLRRTHTLQYWLHTSQKIHRALHTTYEDVGKELTGLDQK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcattggcgctgtccgtggtgctgaaaagatgtggttacacaacggataatgttcca
cttggacggcgggcaggaagtggggataaatctctgagaccgctcctgctgcttctcctg
ttaaccgtcacctcctccccggagtcctgcttccctcacccccagccttgccacatcctc
gcccggataggacacaccgtgcgcctcggtgcgctcttgccgacccgccagccggtacgg
atacaaaacgcgctcaaccgcgccctggctagcctccggcaccagagcggaggggtagac
acgactacctcccaaacacctcccctgctgccctacaacctgagcctggagatggtggct
cgatcgcccgcgggaggggacccggagtcgttgtcccgtagcgcctgccaggacctggtg
gtcaggggggtgtccgccgtgctagccttcccccgctccagggaggagctgatccaggtg
gagttcctctcctcttttctggagctccccttcatctccatcctggaggacacagaaccc
cttgtgaccaagaaccgattccacctgcagatgtcagcccgagtgcctccatcaaccctg
ggcagcctgctgctggcagtgctgcaggggggagaaggggacagggtcagaggaagccag
ggggaagagagctggggaggagcagctgtgatctgccccgggtgggaggaaggaggcgac
gggttgctggctcacctgcagaggcacagtggttctacctggcatttgtgggatatcatc
aacctgacccgcatcacagggggtggggagagaaggggggaggccagcgaggagaggagg
gaggatcagatggaagaagaggctttgaagatcctctccactcgtttcctgcgctccccc
tctcctctctcctctgttctcctcctgggctctgatcctgagtgtctctcctctgtcctg
cgggccgctcagcgactcgctccatcactaccagcactgcagtggatcatgggatacccc
ttatctccagattcgctacacactctaggaggtcccctcgggctgctagcctacggggag
gtcggccgcaagccaatcagtttctacatccgggatgctttgcagttgattggccgagcg
gtcactgcggcgaccatggtgaggccggacttggcgctgatccagaacatggtgaactgt
tacgacaaaccaaaccgccatgagctgccctcttcaggacaatatctggccagatttctc
tccaacacttccttcactggagccacaggcctgatccaggtggatgctggcctctctcgg
gtcctctcctcccagctgttccatgtgtggagtctgaagaggggtgctctgggccagcca
gcctgggttaccgttggccagtggacccgaggcagactggtgttggagggagggatcctg
gggctggtgggagggtttgggagcagccaaggacagggtcttggggctggggtgagggga
ggggacggccagggcgacagcaacatcggaggacgctggaggccgggtctttccgtcgag
ggacaccgcctccgtgtggtaacactggtggagcacccgtttgttttcacacgggaggtg
gatgaggacggattgtgtccagctggtcagctttgtctggaccccagaaccaaccggtcc
gacatcatccagagcctcttcaaccagctgcacaacccaaacactacagctgcagattgg
gagggcaatgaccttccagaggacctcaggaagtgctgctatgggtactgcgttgacttg
ttggaaaaacttgcagaagacatgggcttcaccttcgatctctacattgtgggagacggg
aagtacggggcgtcgagcgggacaggacgctggacggggctggtcggggacctgctgagc
ggaaccgctgacatggctgtcacctcattttccatcaattctgccaggagcagagtcatc
gatttcacctcgcccttctactccaccagcctgggcattctggttcgtagccgggacact
gcagctcccatcggagccttcatgtggcctctgcactggtccatgtgggtgggcatcttc
gtcacgcttcatctcactgcgctcttcctgaccttgtacgagtggaacagccccttcggc
atgacaccccatggcaggaataggctacgtgtgttctcctactcctcagccctcaatctc
tgctacgccatactgtttggacgcactgtcgccaccaagactcctaaatgctggacaggg
cgcttcctgatgaacctttgggcaatcttctgcttactggtgctgtccagctacactgcc
aacctagctgccgtcatggttggggagaagaccttcgagcaggtctcgggaatccatgac
gacaagctgcaccacccctccatgggctttcgtttcggcactgtgagggagagcagcgct
gaagattacatgaagaagagtttcccagagatgcacgactacatgagacgcttcaaccag
cccaccaccccagaaggcgtacacatgttaaagacagatcctcctgccctggatgcgttc
atcatggacaaagccctgctggactttgaggtgtctatcgacgcagactgcaaactgctc
actgtggggaaaccattcgccattgaaggctacggtataggcctgccacagggctctcct
ctgacccgcaatgtgtcagagttcgtgagtcgctacaagtctgacggcttcatggacatg
ctacatgacaaatggtacaaggtcgtgccctgtgggaagcgagtctttgcagtcactgag
actctacagatggggatccagcatttttcaggcctgtttgtgctgctgtgcatgggggtg
ggtggagccttgctgactttggcaggggaacacaccttctatcacctggtgatccctcgc
ctccggcgcacacacacactgcagtattggctgcacaccagccagaaaattcacagagcc
ctccacaccacatatgaggacgtagggaaggagctgaccggcctcgaccaaaagtaa
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