Seriola dumerili (greater amberjack): 111225964
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Entry
111225964 CDS
T05606
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111225964
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
111225964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
hEGF
EGF_3
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
111225964
NCBI-ProteinID:
XP_022606751
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MGAGPVFCQIPCLNGGRCIGRDVCWCPSNSTGKFCHLPVLPPASPHGHKDASHQAPKSPS
HSMYTLPLSNQQVSLHPSLVNVHIQHPPEAEVQVHQVARVQPGQRPAITEGAHSVQQRSQ
PGNGHEPTIEHSSRHSHTNGNWNGHARPHNRQNGHVGRCFQETVDGQCGKPLPGLTKQDD
CCGSVGASWGLNKCQKCPTKPAYAVIANGQVECSKGFKRMNLTHCQDINECLLPGICKNA
ECLNTRGSYRCTCKPGYMLDAARSHCVSDKAVSDLRALCYRSVSAGTCSLPLAQHITKQI
CCCSRVGKGWGSGCDRCPLPGSDHFKEICPAGHGYTYSRSDVQISLRQLEEDDLQSTGVS
WEEQSPTYPQPPSSQPSLLLPSRPHFPIYPQTPQVPQYPEYPETPEAPQYPLTPQQPLHP
SHQDRETPTQPEDMEILSPPAVVTDSPLKYPETSPDSSIIDLMPDSKETTPTDSVTGVDK
CATTPTICGHGKCIPVQTGYTCQCEPGFKLSALQTNCIAYRPSKELPQCCDPLPHIEGLG
PSLCSTRLGSGPSLRNACIVEELQNVNECDEDPCEGKGRCVNSYGSYTCQCHSGYSQVIT
QNRKFCQDINECSMPNKCQNGKCVNTEGSYTCECNSGYAKSWRGLCEDVDECRDPSSCPD
GVCVNTLGSFQCQACGPGFRPVSERCLDVNECLNQTMCGHGRCVNTEGSYRCNCFQGYQL
SPDNICQDVDECVLPGVCLHGRCVNLDGTHKCTCNHGYQVTSDSKACEDVNECATGNACP
AGICINTAGSYTCQNCRPGFGPSVDGLRCEDVDECAQADLCLGGVCANTEGSYTCTRCKA
GYRVSQDRQRCEDIDECQSLSTCANGICLNSEGSYTCENCPTGYTVSYDGELCEDIDECA
LPTTCPQGTCTNTGGSFTCIVCQPGFRVSEDGQQCDDVDECSVPNACPGQLCLNTPGSYT
CRSCGAGMQLTEDGYSCEDIDECQTPGVCPTGVCTNTEGSFSCMSCDPGFTVAPNGLSCE
DVNECDDTSLCLGGQCTNSDGSYSCSCPAGLELVDGTSCRDINECLTIVGICGEGDCLNT
EGSYSCICPDGYTTIDGRTGCQDVDECSKDNVCIRGNCLNTDGSFLCLCEAGFKFNADTA
DCEDQDECKEFGGSVCGTWRCENTIGSYRCFMGCQPGLEGEDTTDCDIDECLNETICGNH
GFCENTDGSFRCQCDQGYTNPPGDMSRCVDVNECEMSLALCGEALCENVDGSFLCICPND
NEEFDPITSQCRSLDTTPEVAPEVPPSATSAEERKECYYNLNDANFCDNVLSRNTTKQEC
CCTVGAGWGDNCEIHACPVPGRDDYNQLCPHGSGLLPLPVSSTQTLGEQRPYIDANECEM
FGSDICKNGQCSNLFSTYTCYCRSGFYYDNIRLECVDYDECEFGNACEDGACVNTAGSFN
CFCSPPLVLDSTRRRCIGLNTTEETIEPDHDVHMDICWQRLEDDNMCAEPLQGRRTTYTE
CCCLYGIAWSGQCAFCPRRDSDDYAIMCNLPRRGGSDSLRERQGYEYGLEGPEDTAEPFV
PPYWDSYGSPAGPYDIPESVPLFNDNDYSVQQPPVPVPRPREHQPRPVDSYAERYEGFEG
LQAEECGVLNGCENGRCVRVREGYTCDCFDGYELDLNKMACIDINECEDISDKVPLCQNG
QCTNTEGSYKCTCLPGFVASAQPHKCIPTIPESELRETGN
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaggcccagttttctgtcagatcccctgtcttaatggaggcagatgcatcggc
agggacgtgtgctggtgtccatcaaactcaacggggaagttttgccacctgccagttttg
ccgcctgccagccctcacggccacaaggatgccagccaccaggcaccaaaatccccctcc
cactccatgtacacgctgccactgtccaatcagcaagtgtctctccacccatccttggtg
aacgtccacatacagcaccctccagaggccgaggtccaggtccaccaagtagctcgggta
cagcctgggcagagacctgccatcacagagggggctcactctgtccagcaacgctcccag
cctgggaatggacatgaacccacaattgaacacagcagcaggcattcacataccaacggg
aactggaatggccacgccagaccgcacaaccgccagaacggacatgtgggaagatgcttt
caggaaacagtcgacggacagtgtggcaagcctctgccaggcctaaccaaacaggatgat
tgctgtggaagtgtgggcgcctcctggggtctcaacaagtgccaaaagtgtccaaccaaa
ccagcatacgcagtgattgcaaatggacaagtggaatgttccaaaggttttaaaaggatg
aatctcacacactgtcaagacatcaatgagtgcctgttgcctgggatctgtaagaatgct
gaatgtctcaacaccaggggaagctacaggtgcacgtgtaaacccggctacatgttagac
gccgccaggagtcactgtgtctcggacaaagctgtgtctgacctgagggcgctgtgctac
cggtcggtgtcagcgggcacatgctctctgccgcttgctcaacacattaccaagcagatc
tgctgctgcagccgagtgggcaagggctggggctctgggtgtgaccgctgccctctgcca
ggatcagaccatttcaaggagatctgcccagctggtcacggatatacctactcgcgctca
gatgtgcagatttctcttagacagctggaagaagatgatctacagagcacaggagtatca
tgggaggagcagagtcccacttatcctcagcctccatcctcccagccttcactgctgttg
cccagcaggccacatttcccaatctacccacagacaccgcaagtgccccaataccctgag
taccctgagacaccagaagcaccccagtaccctctgactccacagcagcctctccatccc
tctcaccaagacagagagacacctacacagccggaagatatggaaattctgagcccgcca
gctgttgtgactgactcaccactgaaatatccagagacttctccagactcctccatcatc
gacctcatgccagattcgaaggaaacgaccccaacagactcagtcacaggtgttgacaaa
tgtgccaccacccccaccatatgtggtcatgggaaatgtattcctgtgcagacgggctac
acctgccagtgtgaaccaggattcaagctcagtgcgctgcagaccaactgcattgcgtac
aggccgtccaaagagctgccacagtgctgtgatcccttacctcacattgaaggccttggc
ccgagcctctgctccacccggctgggctcaggcccatcactgaggaatgcctgtatagta
gaggagctccaaaatgtgaatgagtgtgacgaggacccatgtgaagggaagggccgctgt
gtaaacagctatggctcctacacctgtcagtgtcacagcggctacagccaagtgatcacc
cagaacaggaagttctgtcaagacattaatgagtgcagcatgcccaacaagtgccagaat
ggcaaatgtgtcaacacagaaggatcttacacctgtgaatgcaacagtggctacgccaag
tcttggagaggcctgtgcgaagatgtggacgagtgcagggatcccagctcctgtcctgac
ggcgtctgcgtcaacactctcggctccttccagtgccaggcctgcggcccgggcttcagg
cctgtcagtgaaagatgtttggatgtaaacgagtgcttgaaccaaacgatgtgcggtcat
ggtaggtgtgtcaacactgagggctcctataggtgcaactgtttccaaggctaccaactc
tcaccggacaacatttgccaagatgtggatgagtgtgtgctcccgggagtctgtctccac
ggccgctgtgtcaatctggacggcacccacaaatgcacctgtaaccatggttaccaagtc
acctcagacagcaaagcttgtgaagatgtcaatgagtgcgcaactggtaatgcatgccct
gcgggaatttgcatcaacacagcaggttcctacacttgccagaactgcaggcctgggttc
ggaccatctgttgatggactgagatgtgaagatgtggatgagtgtgcccaggctgacttg
tgtctgggcggggtgtgtgccaacacggagggatcctacacctgcaccaggtgtaaggct
ggctacagagtgtctcaagaccggcagaggtgtgaagatattgatgagtgccagtccctg
tctacctgtgccaacgggatctgtctaaactcagaaggctcttacacctgtgagaactgc
cctacagggtacacagtatcttatgacggggagctctgtgaagatattgatgagtgtgcg
ctgcccactacatgcccccagggaacatgcacaaacacagggggttccttcacatgtatc
gtctgtcaacccggtttcagagtctctgaggatggacaacagtgtgatgatgtggatgag
tgctcggtgcctaacgcgtgcccaggccagctgtgcttgaacaccccgggatcctacacc
tgcaggagctgtggagccggcatgcaattgactgaggacggatacagctgtgaggacatc
gatgagtgccaaaccccaggtgtgtgccccacgggtgtttgcaccaacacagagggctcc
ttctcctgcatgtcctgcgacccaggcttcacggtggcgcccaacgggctctcatgtgaa
gatgtgaatgaatgtgatgacactagcctgtgtctcggaggccagtgcaccaacagcgac
ggctcttatagctgctcctgccctgctggtctggagctggtggatgggacgtcctgcaga
gatatcaatgagtgtttaaccattgtgggaatctgcggagaaggagactgtctgaacact
gagggctcctactcatgcatctgtcctgatggatataccaccattgatggaaggaccggc
tgccaagatgtggacgaatgcagcaaagacaacgtgtgcattcgggggaactgtctcaac
actgatggctctttcttgtgcttgtgtgaggctggtttcaagttcaacgccgacacggcc
gactgtgaagaccaggatgagtgcaaagagtttggaggctcagtgtgtggtacctggcgc
tgcgagaacaccatcggctcctaccggtgcttcatgggctgccagccaggccttgaggga
gaagacaccacagactgtgatattgatgagtgcctcaatgaaaccatctgtgggaaccac
ggcttctgcgagaacacagatggctccttccgctgccagtgtgaccaaggctacaccaac
ccgccgggagacatgagcagatgtgttgacgtgaacgagtgcgagatgagcttggcgctg
tgcggggaggccctgtgtgagaacgtcgatggcagcttcctgtgcatctgccccaacgac
aatgaggaatttgatcccatcaccagccagtgccgctccctggatactaccccggaagtc
gctcctgaagtccctccatctgctacctcagctgaagagaggaaggagtgttactacaac
ttgaatgatgccaacttctgcgacaacgttttgtctcgcaacaccaccaagcaggagtgc
tgctgcacggtgggggcgggctggggggacaactgcgagatccacgcctgtcctgtcccg
ggaagagatgattataaccagttgtgccctcatggtagtggattattacctctgcctgtt
tcttctacacaaactctgggagaacagcgtccttacatagatgcaaatgagtgtgagatg
tttggatcagacatttgtaagaatggacagtgttcaaatctcttctctacctacacctgc
tactgtcgctctggcttctactacgacaacatccggcttgagtgtgtggattacgatgag
tgtgaatttggaaatgcctgtgaggatggagcgtgtgtgaacacggccggctctttcaac
tgtttctgcagtcctccattagtcttagacagcacacggcgccgctgcattggcctcaac
accacagaggaaactatagagcctgatcacgatgtgcacatggatatttgctggcagcgt
ctggaggacgacaacatgtgtgcagaacccctccagggacgcaggacgacgtacactgag
tgttgctgcctgtacggcatcgcctggagtggacagtgtgcattctgtcccaggagagac
tctgatgactatgcaatcatgtgcaacctgccccggagaggaggttcagacagcctgcgg
gagcggcaaggatacgagtacggacttgaggggccagaggataccgcagagccttttgtt
cctccatactgggacagttacggcagccctgcaggaccctatgacattcctgaaagcgtt
cctctcttcaacgacaatgactacagcgttcaacagccacctgtcccagtcccacgacca
cgggagcaccagccacgaccagtggattcttatgcagagcgctacgagggctttgaggga
ctccaagcagaggaatgtggagtcctgaatgggtgcgaaaacggccgctgcgtgcgcgtg
agagaaggctacacctgcgactgcttcgacggttacgagcttgacctaaacaagatggcc
tgtatagacataaacgaatgtgaggacatcagcgacaaggtgcccttgtgtcagaatggg
cagtgcaccaacacagagggatcgtacaagtgcacctgtttgccgggcttcgtggcctct
gcccaaccacacaaatgcatcccaacgatccctgagtctgagcttagggagacaggaaac
tga
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integrated database retrieval system
