Seriola dumerili (greater amberjack): 111226041
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Entry
111226041 CDS
T05606
Symbol
lrfn5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111226041 (lrfn5)
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
111226041 (lrfn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
LRR_14
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
Rop
LRRCT
Sp38
Ig_5
Motif
Other DBs
NCBI-GeneID:
111226041
NCBI-ProteinID:
XP_022606844
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFADLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWEAIQKMTSLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMTSSSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQLLSGRYFWSIPEEEFICEPPLITRYSHEMRVL
EGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYNNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTVDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSMSMTNVHSQTNGQQSQGCTVTPSASKHGSIGLD
DLSGGTKKRSGAAAAGGGGGGGGGGKDTMTHSSDSSLPDCSTTTSVLSQPWTARSPTAGA
EEREKAGEERAQAGISTPTTTTGSLPKPKRMPAQSKPGSNLNTNRNNSTSLNQTPPPFAP
SPFSSQHPTPSPVPSIRFRETPILRRAPHAASSSSSATVSSSAKYQTLPVEEGGRSRARR
RYSLSEGGPKTHSSHQGGGAPRLGRIMRNKRSQSMSGMLLPKDGDGDSDKGRCDSDWILE
STV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctgtgtgtgatgctggcagttgccatggcagtgcgggcacagatc
tgcccaaagcgctgcgtatgtcagatcctgtcgcccaacctggcaaccctctgcgccaag
aaaggtctgctctttgtaccaccgaacattgacaggcatactgtggagctacggctggct
gacaactttgtcacaagtgtgaagaggaaagattttgcaaacatgacacggctggtagac
ctgacattatccagaaacaccatctcctacatcacacctcatgcctttgccgatctggaa
aacctcagagctctacacctcaacagtaaccggctgacgaggataggcaatgatacattc
agcgggatgtcgaagcttcaccacctgattctgaacaacaaccagctggtgctgatccac
cagggagcgttcaacgacctgctggcgctggaagaactggacctcagctacaacaatctg
gactctattccttgggaggccatccagaaaatgacgagcctccatacgttgagtttagac
cacaacatgttggactttattccagagggaaccttctcactgctacagaaactcaaccgg
ctggacgtcacctccaataagctccagaagctcccaccagaccctctttttcaacgagct
caggttctggccacatcaggaatcatgacctcctcttccttcgcactgtcttttggcggg
aaccctctccactgtaactgtgagttactgtggctgagaaggttgaacagggaggacgac
ctggagacatgcgcctcaccccaactcctctctggtcgatacttctggtccatccccgag
gaggagttcatatgtgaaccccccctcatcaccagatactcccatgagatgagggtgctt
gaaggacagcgagtcgcactgaggtgtaaggcgagaggtgacccagagccagccatccac
tggatctctccagagggcaaactggtgtctaactcctccagaacattggtgtacaacaac
gggaccctggacatcctcatcagtactgtgaaagacaccggctccttcacctgcatctcc
tccaaccctgccggtgaagcccaccaaacagttgacctggttattataaaactccctcac
atctccaacaacaccaacaacatccaagagcctgacccgggatcgtcggacatttccacg
tcgacccgaggcggggccaacggcagcaacgtgacgggcgacgtgaagggcggcgtggac
aagagggtggtgacggctgaagccacatcgtcgacagctctgatcaagttcaacttccag
aggaatattccaggcattaggatgttccagatccagtacaacgggagccaggacgactcg
ctggtgtacagaatgatccccccgtcaagcaagaacttcttggtcaacaacctggccgcg
gggacccagtacgacctctgcgtgctggccatctacgatgatgtcatcacctctctgaca
gcaacccgcgtggtcggctgtgtgcagttcaccaccgagtcagagtacatgaggtgtcat
ttcatgcagtcgcagtttctcggcgggactatgatcatcatcattggagggataatagtg
gcctcggtgctcgttttcatcatcatcctgatgatacgttacaaggtgtgtaaccctggg
gagggcggtaaaggcgtttcaatgtcgatgaccaacgttcactcacagaccaatgggcag
cagtcgcagggatgcactgtgactcccagcgcctctaaacatggctcaatcggattagac
gacctctcgggaggcacaaagaagaggagcggagcagcagcagcaggaggaggaggagga
ggaggaggagggggcaaggatacgatgactcattcgtccgactcttccctgcctgactgc
tccaccactacgtcagttctcagccagccttggacggctagaagcccgacagctggagcc
gaggaacgggagaaagcgggtgaagagagagctcaggccggcatctccacgcccaccacc
accactggttcactacccaagccaaagcggatgcccgcccaaagtaagccaggctcgaac
ctcaacaccaaccgcaacaactccacctctctcaaccaaaccccgcctcccttcgctccc
tcccctttctccagccaacaccccacgccgagccccgtcccctccatccgattcagagag
acgcccatcctgcgccgggctccccacgccgcctcctcctcctcctccgccactgtttcc
tcctccgccaagtaccagactctccctgtggaggagggagggaggagcagggcgaggagg
aggtactcgctcagtgagggaggcccaaagacgcactcgtcacatcagggaggaggagcg
cccagattagggcgcataatgcgaaacaaaaggagccaatcaatgagcgggatgctgctc
cctaaagatggggacggagactcggacaaaggacgctgtgattcagactggatcttagaa
agcacggtttga
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