Seriola dumerili (greater amberjack): 111226125
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Entry
111226125 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04080
Neuroactive ligand-receptor interaction
sdu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111226125
04082 Neuroactive ligand signaling
111226125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111226125
Ion channels [BR:
sdu04040
]
Ligand-gated channels
GABA-A
111226125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111226125
NCBI-ProteinID:
XP_022606945
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MAFGMCNAPATFQRSKADSNSTRNFKDITTFTKILDSLLDGYDNRLRPGLGDRVTEVKTD
IYVTSFGPVSDTDMEYTVDVFFRQSWKDERLKFHGPQXTLPLNNLMASKIWTPDTFFHNG
KKSVAHXHAMPNKLLRIMEEEPCLYTMRLTVQAECPMHLEDFPMDSHSCPLKFGSYAYTK
TEVTYIWTRNASQSVDVAADGSRLNQYDLVGQSVGKETIKSSTGEYTVMTAHFHLKRKIG
YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT
AMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEASIMKKNNAYAVAVA
NYAPNITKDSTLPTISKCALSDPNKTTAETKPEQNKKTFNSVSKIDRISRIMFPVLFGSF
NLVYWATYLNREPVIKDLDPSK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgggatgtgcaacgcccctgctaccttccaacggtcaaaggcggattccaat
tcaacacgtaacttcaaagacatcacaaccttcactaagatcctggacagtctgctggac
ggatatgacaacagactgagacctggtctgggagaccgagtgacagaagtgaagactgac
atctatgtgaccagctttggcccagtgtctgacacagatatggagtacactgtggatgtc
ttcttccgtcagagttggaaggacgagcgactgaagttccacggaccgcagntgacactg
cctctcaacaacctgatggccagtaagatctggactcctgacaccttcttccacaatggc
aagaaatcagtagcccattaacatgccatgcccaacaagctgctgaggatcatggaggag
gaaccctgcctgtacaccatgaggctcacggttcaagctgagtgtcccatgcacctagag
gacttccccatggactctcactcgtgtcctctgaagtttggcagttacgcctacactaag
accgaggtcacgtacatctggactcgtaacgcctcccagtctgtggacgttgcagctgat
gggtccagactcaaccagtacgacctggtgggccagagtgtggggaaggagaccatcaaa
tccagtactggtgagtacacagtcatgacggctcacttccatctgaagaggaagatcggc
tactttgtgatccagacctatctgccctgcatcatgacggtcatcctctcccaggtctcc
ttctggctcaaccgggagtctgtgccggccagaactgtctttggtgtgactacagtcctc
actatgaccacgctgagtatcagtgcccgtaactcactgcctaaggtggcctatgctaca
gctatggactggttcatcgctgtctgttacgccttcgtcttctctgcgctcattgaattt
gctacagtcaactacttcaccaagagaggctgggcctgggacgggaagagtgtcgtcaat
gacaagaaaaaggaagcatccatcatgaagaagaacaacgcctacgctgtggcggtggct
aactacgctcccaacatcacaaaggactccacgctgcccaccatctcaaagtgcgctctg
agcgaccccaacaagaccacggcagagaccaagcccgagcagaacaagaagaccttcaac
agcgtcagcaagatcgaccgcatctcccgcatcatgttccccgtgctgttcgggagcttt
aacctggtctactgggccacctacctgaacagagagccggtcatcaaagatctggatcct
tccaagtga
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