Seriola dumerili (greater amberjack): 111226200
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Entry
111226200 CDS
T05606
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03022
Basal transcription factors
sdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111226200 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
111226200 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111226200 (mnat1)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111226200 (mnat1)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111226200 (mnat1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111226200 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
Xol-1_N
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
111226200
NCBI-ProteinID:
XP_022607033
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKRDFDFPSLREYNDYLEQVEDIVYNLTNNIDVENTKL
RMEQYQRENRDLIQKNKATLTREQEELEELLLQEQQGNEQRRLEVLQEEQRQLQAKRKSK
QALLDELEQSQLPATILLAQHKVRAAQLETQIEQQKQAVKPTNLFSTGIHMRQTVSLLPV
AKIEEVLYHYKPLQVETYGPPVPELEQLGRLGYLNHVRAAMPQDTAGGYTSALACHRAVQ
DAFSGLFPSKG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaggggtgtccgagatgcaaaacaaccaaatacaggaatccctcgctgaag
ctgatggtgaacgtctgcggccacacgctatgcgagaactgtgtggagatgctgtttgtg
cgcggctcgggcaattgcgtgcagtgcgacacgcccctgcggaagagcaacttccgcgtg
cagctctttgaagacccgacggtagataaggaggtggagatccgcaagaaggtgctgaag
atatacaacaagagagattttgacttccccagcctgagagagtataacgactacctggag
caagtggaggacatagtgtacaacctgacaaacaacattgacgtggagaacaccaagctg
aggatggagcagtaccagagggagaacagagatctcatccagaagaataaggctactctt
actcgagaacaggaggagcttgaggagctgctgttgcaggagcagcagggcaatgagcag
cggagacttgaggtgctgcaggaggagcagaggcagctgcaggccaagaggaagagcaag
caggctctgctagacgaactggagcagtctcaacttcctgccaccatcttgcttgcccaa
cacaaggtccgtgctgcccagctggagacccagatagaacagcagaaacaggcagtcaaa
cccactaatctgttttcaactggaatccatatgcgtcagacggtgtctctcctgcctgtg
gccaagatagaggaagtcctgtaccactacaagcctcttcaagttgaaacctacggacca
ccagtgcctgaattggagcagctcggcagactcgggtatctgaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcggctttggcgtgtcatcgagccgttcag
gatgctttcagtgggctgttcccttcaaaaggataa
DBGET
integrated database retrieval system
