Seriola dumerili (greater amberjack): 111226216
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Entry
111226216 CDS
T05606
Symbol
dcaf10
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111226216 (dcaf10)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111226216 (dcaf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_DCAF4
WD40_like
RMC1_N
Beta-prop_TEP1_C
Omptin
Motif
Other DBs
NCBI-GeneID:
111226216
NCBI-ProteinID:
XP_022607054
UniProt:
A0A3B4TGB5
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSSEQQSASEDADESQDRPNGGSVSDKEEDPDIDESEEEDDIARGVTPSMPGSSGDRPER
SSRSPASEDREPRGEPTAAPQTGSGGVSGTDTDSGSGRGNSLFSWLQSRTIRRGVFVDPA
RDNFRTMTSLYCSMNPAVESVNLSTQTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPISS
RHIKTLTEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNSKVCSLHGHASWVKNIE
YDTNTRLLVTSGFDGNVITWDTNRFTEDGCPHKKFFHTRYLMRMRLTPDCSKMLISTSSG
YLLILHDLDLTQSLEVGSYRMLRARRTPLSSDGGTSASRSAGTPRQGNDSSKIHPHREGL
SPRNSLEVLTPEIPGERDRGNCITSLQLHPKGWATLIRCSSNMDDQEWTCVYEFQEGAPT
RPLVSPRCSLRLTHYIEEANVGRGYIKELCFSPDGRLICSPYGYGVRLLAFDESCGELAD
CLPVQTSCLREIRSIYSHSDVVLTTKFSPTHCQLASGCLSGRVALYQPKF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagcagcagagcgcgagcgaggacgccgacgagtcgcaggacaggcccaac
ggtggtagcgtctccgacaaagaggaagaccctgacatcgacgagtcggaggaggaagat
gacatcgctcggggggttacaccctcgatgcccgggagcagcggagaccggccggagcgc
agctcaaggtccccggcgtcggaggaccgggagccccgtggcgaaccgaccgccgcgccg
cagacagggagcggcggggtctccggcaccgacacagacagcggcagcggcagggggaat
agtctgttttcctggctgcagagcaggactattagacgaggggtgtttgtagacccagct
agggataacttcaggacaatgaccagtttgtactgctccatgaatccggctgtggagtct
gtcaacctgagcacacagacccacggtgcggtgttcaacctggagtactccccggacggg
tctgtgctgactgtggcctgcgagcagactgaagtcctgctgtttgatcccatctcatcc
agacacatcaaaaccctgacggaggcccacgaggactgcgtcaacaacataaggtttctg
gacaatcgtttgtttgccacctgctctgacgacaccacaattgcattatgggatctccgt
aagctgaactcaaaggtttgctccttgcatggccacgctagctgggtgaaaaacatcgag
tacgacaccaacactcgtctcctcgtcacgtctggcttcgacggcaacgtcatcacatgg
gacactaacaggtttacggaggatggctgcccgcacaaaaagttcttccacactcgctac
ctgatgaggatgcgtctgacgcccgactgttccaagatgctcatctccacttcctcaggg
tacctgctcatcctgcacgacctggacctcacgcagtccctcgaggtggggagctaccgc
atgctgcgagcgcgacggactcccctcagctcagatggaggcacatcagcgtccaggtca
gctggaactcctcgccagggaaacgactccagtaagatccaccctcacagagaaggtctt
tctccccggaacagtctggaggttttgactccagagatccccggagagagggaccgaggg
aactgcatcacctccctgcagctccatccgaaaggctgggccacgctcatccgctgctcc
agcaacatggacgaccaggagtggacgtgcgtgtatgagttccaggagggagcgcccact
cgcccgctcgtctccccccgctgctccctccgcctcacccactacatcgaggaggccaac
gtggggcggggctacatcaaggagctgtgtttcagcccggacggacggctcatctgctca
ccgtacggctacggcgtccgcctgctggccttcgacgagagctgcggcgagctggccgac
tgcctgcccgtccagaccagctgcctcagggagatccgctccatctactcgcacagcgac
gtggtgctcaccaccaagttctccccaacacactgccagctggcctccggctgcctcagc
ggacgcgtggccctttaccagcccaagttttag
DBGET
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