Seriola dumerili (greater amberjack): 111226398
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Entry
111226398 CDS
T05606
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111226398 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111226398 (ttc37)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
111226398 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_11
TPR_14
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
ChAPs
HemY_N
Fis1_TPR_C
TPR_15
TPR_Slam
Loricrin
Motif
Other DBs
NCBI-GeneID:
111226398
NCBI-ProteinID:
XP_022607239
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSGKEVKAALKSAREAIKNKEFKEALKSCKAVLKLEKNNYNAWVFIGLAASELDQPDQSQ
SAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNVYQKLVELYASSDKKKCYEVIT
KLSDIYQSDKEYLKLAKVWLQLIQLREEDAADKKELLQLWQKMTQLISECLHEEEQDNET
QQHLITAFENTLVLMAPGEKHEKISADYVKCLSKLPQEEAKMKAACESMLSHYPKQSYPL
EVLCSHYLKTGILNEDTISSFSRLLDLAPNCGLGHLGLGTKALQEGRYKDAIKDLSHGLK
KMGCSTGWYSLAEAQFKVHRYSDSATSCSQGLMMCVSGDKELRVKLLRLTLETLVRIGGE
KAADQALETFSQIPDAEKDPVLVALKGRAYLNKGQIDQALKVSSELVASNPNLAQGLALR
GLVHLAEGQQQLAEQSLLNAATQSPNCAEYYFLLGQLYWDMGEETRKDRSKAHTHLLKAA
KLDPHLGCVFRYLGHYYREVANDRGRARGCYKKAFELDNEDAESGTASVDLSMEQGDMDT
ALATLESVIEKATPGSAKWAWMRRGLYYLKAGENQLAIADLQAALRADPEDWVCWECLGE
AYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDYVP
ALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACTAV
STVSPNRAQVLVPALLAGLDPNSQSHMLNQVQMLKVGEGCYAHALKLMSEAPSLWYDLGL
NYYHQSSLPCPTEADQNSQSLVLEKAQQCLKKAIMMDSGNHSYWNALGVISMNKGLENYA
LAQHCFIKSIQVEPSNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQALI
AERVGSYDTMDLFRHTTELNTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAISA
AQVALSKYTERIQSDADAFIMLGYLNEHLQLKRQALQAYQRAVELLQSMSSTEELTFALG
SYGRALCTAGQWEEAVHVYNSTPLQELSDLAGLALAYCRAGLIPESICAYERALAVASTE
KEKAYILTALALLQHRQGSLDSAKSLLFKCSMLKEPIPESLLCLCALGLVHSDATLAAAA
LTELLKQGSASGSVVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALLSRVV
PQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLASGRHSGEDSHRNALKTMQRAV
LLCPDDPAAWAGLMGACHTENTSCYLSGSAPCRQGLEKILMAVVSEKVRNVEEIERPLAQ
TLEGWVLQQAVTGLVLAGHLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLLAKGGTV
LPDSVLEQLNKTVMMNPTNLGAWLWLAEVYRSQGLLVQAVMAYRQSLQLASQLGLHSSQV
SSLLRLALLALVPCMAGVPGNDWKDLVLEATTEVLKLGSSPMAQLFQALLQYVTKMAARE
TRRLLERLVYVSSQDFPVTVVQVASWYLLRHLHAKNDQELITVLLQHAKMKRDKRLLEFD
SLLASSSS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaaagaagtgaaagcagcactgaaaagtgccagagaggccattaaaaacaaa
gaattcaaagaggctctgaaaagctgcaaggctgttttaaaacttgaaaagaacaactat
aatgcatgggtattcatcggcttggcagccagtgaactcgaccaaccagatcagtcacag
tcagcctacaaaaaggcagtggagctggagcctgagcagctactggcatggcagggctta
gccaatctttatgaaaagaccgatcagtgggatttcaaagttgagctacctaatgtttat
cagaagcttgttgagctgtatgccagctcagacaaaaagaaatgttatgaggtgatcaca
aagctgtcagatatctatcagtctgacaaagagtacttaaagttggcaaaggtgtggctg
cagctcattcagctgagggaggaagacgctgcggacaagaaagagttactacagctatgg
caaaagatgacccagctcatctcagagtgccttcatgaggaagagcaggacaatgaaact
caacagcatttaatcacagcatttgagaacaccttggttctcatggcaccaggagagaaa
cacgagaagatctcagctgactatgttaaatgtctttctaaactgccccaagaagaagcc
aaaatgaaagcggcatgtgagtccatgctgtcccactaccccaaacaaagttatcctctt
gaggtcctttgttctcattacctcaaaacaggtatcctgaatgaggatacaatcagcagt
ttctcccggctcctggatctggcccctaactgtgggttaggtcacttaggtctgggcacc
aaagcacttcaggagggaagatataaagatgccattaaggacctttcacatgggctgaag
aaaatgggctgcagtacaggatggtacagtctggctgaggctcagtttaaagtgcacaga
tactcagacagtgctacatcatgctcacaaggtctgatgatgtgtgtttctggagacaag
gagctgagggtcaaactgctcaggctgaccctagagactttagtcagaattggaggagag
aaggctgcagaccaggctttggagaccttttcacagattccagatgcagaaaaagaccct
gttctagtagcccttaaaggacgtgcataccttaacaaaggacagattgatcaagcactt
aaggtgtcatcagagctagtggcttccaacccaaacctggctcagggtttagcactgaga
ggactggtacacctggctgaaggccagcagcagctggcagagcagagtctcctaaacgca
gctacccagagcccaaactgtgcagagtattactttttgctgggacaactctactgggac
atgggagaggagacccgtaaagaccgcagcaaagcccatacacacttgctgaaggctgca
aaattagatccacaccttggctgtgtattccgctaccttgggcattattaccgggaggtt
gcaaatgatcgtggccgtgcacgaggctgctataaaaaggcctttgagttggacaatgag
gatgctgagtccggaactgcctcagtggatcttagtatggagcagggggatatggacacc
gccttagcaacacttgagtctgtgatagagaaagccactccaggctcagctaaatgggct
tggatgagacgaggcctctactacctgaaggctggagagaatcaactggccatagctgat
ctacaggcagctctgagagcagacccggaggactgggtgtgttgggagtgtttaggtgag
gcctacctaaaccgccgaagcttcacagctgctctgaaggcctttggtaaggcccatcaa
cttcagccctcctccatctacagtgtttaccaggctgctgcaatcaaacagaccctgggc
aagttcaaagaggcagttgcagagtacttgcagatcactgcacagcaggactatgttcct
gctctcaaaggtcttggagagtgccagctgtctctggcaaaaagtttaatggaggactgc
agagatggaggagccattgatctcattcagcaagccatacagaacctcttcagagctgtg
gagctgcgtcctgacctgtcctgcttgtggaagctgctgggagatgcatgcaccgcagtc
agcactgtgtcaccaaacagagcacaggttctagtgcctgcactgctggctggtttagac
ccaaactcacagagccacatgctgaaccaggtccagatgctcaaagtcggcgaggggtgc
tatgctcatgctttaaagctgatgtctgaggcccccagcctttggtatgacctaggactc
aactattaccaccagtccagcctaccctgccctacagaagcagaccagaactcccaatct
cttgtccttgagaaggctcagcagtgtttgaaaaaggccatcatgatggacagtgggaac
cacagctactggaatgcccttggagtgatttccatgaacaaaggtcttgagaactatgct
ctggctcaacattgcttcatcaagtccatacaagttgagccaagtaatgttgttgcctgg
acaaaccttggtaccctgtatttgaagaaggacaatatagagcttgcacacgaggccttc
aagattgcccagtccttggagccactgtatgtgaactgctggatcggacaggctctgata
gcagagagagtgggaagctatgacaccatggatcttttcagacacaccactgaactcaat
actcacatggagggagtgaaaggttatgcctactgggtatgttccaccctgctggataag
agcaacagagactctgaactgtatcgctacaacatagtccaaatgaatgccatctctgct
gctcaggtggcactcagcaagtacaccgagaggatccagtcggacgctgatgccttcatt
atgctgggctacctgaatgagcatctgcagctgaagaggcaggccttacaggcttaccaa
agagctgttgaactgttgcaatccatgtcctcaacagaagaactgacttttgctctgggc
agctatggccgtgctttgtgcaccgcgggccagtgggaggaggcagtgcatgtctataat
tctactccactgcaggagctcagtgatctggctgggctggctctggcctactgcagggca
ggactcatcccagagagcatttgtgcctatgaacgtgccttggctgtggcttccactgag
aaggaaaaagcttacatcttgacagctctggccctgctgcagcatcggcagggcagccta
gactcagccaagagtctgctgtttaagtgctcaatgttaaaggagccaatccctgagtct
ctgctatgtttatgtgccctggggttggtccacagtgatgctacactagctgctgctgcc
ctgactgagctgctgaagcaaggttcagcctctgggagtgttgtagagcagcgatgttta
cttacctgcaccttgttggccctgcagggtaactacagtgcggtgcaaagagaggcttcc
agagctgtgcacagcaatcctggaaacccgtctctgtgggccctgctgtccagagtggta
ccacagtactaccccaggaaggcaaatggtggagcaatggccggccatgtagcctgtctc
tccagtatgacgcaaggaaagagggcgttgttgtacagtggagtgaaccagctggctagt
ggaagacactctggagaggacagtcacaggaatgcactgaagaccatgcagagagctgtg
ctgctctgtcctgatgatccagcagcatgggcgggattaatgggtgcctgccacacagaa
aacacatcctgttatctttctggttctgccccttgcagacaaggactggagaaaatcctc
atggcagtggtttctgagaaagtgcgtaatgtggaggaaatagagcgccctctagcccag
actttagaaggctgggtactgcaacaggcagtgactggtctcgtgctggctggacatctg
gagcaggcggaagccctctgctcacaggtgctgaatgtttctccagaacacccagcagtg
atgctgtcactgagacaagtgcagtgtcagcgcctccttctggccaaaggtggtactgtc
ctcccagactcagtgctggagcagctcaacaaaacagtgatgatgaaccccacaaaccta
ggggcatggctttggctggctgaggtgtatcgtagccagggtctgctggtccaggcagtc
atggcttacaggcagagtctgcagcttgcctcacagctcggcctgcacagcagccaggtt
tccagcctgctgcgactagccctgcttgctctagtaccctgtatggcaggtgtcccagga
aatgactggaaggacctggtactagaggccacaactgaggttttgaagctgggctcctcc
cctatggcccaactcttccaggccctgctccagtatgtgaccaagatggcagctagggaa
acaaggcgtttgttggagaggctggtgtatgtttcctctcaagacttcccagtgacagtg
gtgcaggtggccagctggtacctcctcagacacttgcatgccaaaaatgaccaggagctg
atcactgtccttttgcaacatgccaaaatgaagcgagataaaagactgctggagtttgat
tcactgcttgcctcttcttcatcctga
DBGET
integrated database retrieval system
