Seriola dumerili (greater amberjack): 111226416
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Entry
111226416 CDS
T05606
Name
(RefSeq) FERM and PDZ domain-containing protein 1-like
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111226416
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
Other domain-containing proteins
FERM domain-containing proteins
111226416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ_6
PDZ
FERM_C_FAK1
FERM_f0
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
111226416
NCBI-ProteinID:
XP_022607270
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MEENERCRSRSPARRASRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSNQNFQAKL
TLQITRDPVLDSSTGHGFTLTTNPPLLVRDVATGSPADGILFPGDQVLQINDTVLEDLST
EQVENILRDLQDCITVTILRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNTTTVKDIVLTLKDKLSIRAIEYFALVLEQQYSITK
LLLLHEDEFIQKVVQKKDSHDYRCLFRVCFIPRDPVDLLQDDPSTFEYLFLQSVGDVLQE
RFAVEMKCNTALRLAALHMHERLDSCGQTRTSIKSITKEFGLDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRQKVISASQARLAYLTQLGELISYGGRSYTATMMLQDREVLVSL
LVGAKYGMSQIINHKLNVISTLVEFSSISRVELLSESDKVSLLRISLHDMKPFALLMDSL
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGRFAVIEGVCYESLSSY
VSRCCSDSDDSTDEDDPMDSQNYKRPDPASQDWEERRREEEEKRREEERKEREEHKGKQE
VKIIVTTEGKENEGEEERGATGCGLHKFSIIDEEMNLETTWYHTDPRVTSSFSSLSSGSL
SAALEESSAAAKAPSRMDALRGPRTAEDLQSLDVHHPYLLEPKRRQGPLRPTNLNYRGND
NSCLCFAELSKADFLPSPPGATTDDDDDDDEEEEDEHGVEELRRISKIPSSRDLRMIDSI
PFQRSPIKRKKKVPPKVPMRTSSIPGHKAEQAEQRLSKDEEGLFLTPSPNPKPALLVKET
VSESEDEFFDAQERFTPPVPDLSDAELADRRNANRLSGTWNGVPAAPGKEPSPQSSKIKK
QVETLKGTTNQLTNQQPSPTKPSQKPEVKVKPPLAPKPQLPPKPQIIPPKSPQHGRSYAH
CNGDASGRLSSELLEMEPDTMEFKSVTSGAGGLPLSSPLITAVRCSKQPLQITTPQPEEK
TKRQENSSKQKKDVMHESGAHVVSKDKANIPDEKETPQVEGKSNGTILPAKRPPNLPPIP
HSNSGEKLAVPPPVPPKPTSPTNLHPLSIPASSPVSPTDPSKGVFKDSVSPPNGIHPWSS
RNGSIQSGPRRVSLSHESLSPKNTDAPLTLTTSLTSTNSKGVGGLESREPGRSGSGSDLR
TSSSSLGGRLPASALRGRIQALPWYMTRSQEILGTLDYPSTSSINGDTSGFGSGLSVASG
LSDLNKTPVKEKETVVSKSGGKGNILEDGAEVVIATIKEAQDVTSHMKKANGTNGSHPNL
TFKENSSNSGSVSSEQPQSRPHSAVGLGGVSSMQIGGDSPTSSLADSTPPQQHREACGCR
TVYANCFSGDTEDGVSFDEELTVYEFSRRTRPKPARQAPVPSPTTPPPNPNILSLLRDNP
RPLSTFSTASSELSPLVSRPVSPTTSFGGPLRSLTNKNYGGLKGGFASLRQDIDQLLLVL
ERGALGQPQHTFCPDSKQDITGIKVGPDLNHNGTEDGTTPEPGSNCTGTSPTAMTEAERS
LLQAEARRLASGCQRATRVGWAPDEALRSLSNSFSALVQLSAACLRTNPCSGCDMCHNAS
LVHGDEDDDSQEAMDKLKEIVGLYREFVGAVETAGTGAGVGGKSVGLNGSGQGQGESDGV
RLLAKRCTVLISSVFALTQLFRTRTLDTSNTPGHVPLNF
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaatgagcgatgtaggagcagatctccggctcgaagggccagtcgggtgcag
caggtggtgggaacaataatacgacgcacccgagagtcgcttagcagagagcggttgcta
ggcgatgggaggtcgcagcgctccaacagtctgtccaatcagaatttccaggccaagctg
acgctgcagattacccgggacccggtcctagacagcagcactggacatggcttcaccctc
accacaaacccacccctgctggtcagggacgtcgccacagggagtcctgcagatgggata
ctgttcccaggggaccaggtgctgcagattaatgatacagtgctggaggatttgagcacc
gagcaggtggaaaacatcttaagggacttgcaggattgtatcactgtgactatcctacgg
cacatgacaaatcccaagtcatccatcatgtcggcagagaagagagctcgtctgaggagt
aatccagttaaagtgcgctttgcagaggaggtggtggtcaacgggcacactcagggaaac
tctcttctcttcctgcccaatgtcctaaaagtctatttagagaatggacagaccaaggcc
ttcaagtttgataacaccaccactgtcaaggacattgttctgactctgaaggataaactg
tccatccgggccatcgagtactttgccctggtgctagagcaacagtacagcatcaccaaa
ctcctgctgctgcacgaagacgagttcatacagaaggtggtgcagaaaaaagactcccat
gattaccgatgtttgttcagggtgtgtttcatccccagagaccccgtggacctgctgcag
gatgacccttctacctttgaatacctatttttgcagagtgttggggacgtgctgcaggag
cgttttgcagtggagatgaagtgtaacactgcacttcgcctggcagcactgcacatgcac
gagagactagacagttgtggacagaccaggacctcgatcaagagtataacgaaggagttt
ggccttgacagcttcatctctcccacgctgctgagcaacatgagggagaaggacctgagg
aaagccatcagctaccacctcaaaaagatccagtccctgctggagccacgccagaaggtc
atatctgcttcacaagctcggttggcctacctcactcagctgggagagctcatttcatat
ggcggacggtcatacacagctacaatgatgcttcaagacagggaggtgctggtcagcctg
ctggtcggggccaaatatggaatgagtcagatcatcaaccacaagctcaatgtgatctcc
acactggtcgagttcagcagcatcagccgagtggagttgctctcagagtcggacaaagtc
agcctactgcgcatctcactgcacgacatgaagccatttgccttactgatggactctctg
gcagccaaagacttagggtgtctgctgggaggctactgcaaactcctggtggatcccagt
gtcaatgtcttccgtctggggcgcccaaaagtgagggtgcaccggattcctgctgaagaa
ggtgtgtgtgggaggttcgccgtaatagagggcgtgtgctatgaatccctatcaagttat
gtgtctcgctgctgtagtgactcagatgactcaacagatgaggacgacccgatggattct
cagaattacaaacgtccagaccctgcaagtcaggactgggaagaaaggaggagggaggag
gaagagaagaggagagaggaagaaagaaaagagagagaggaacacaaaggcaaacaggaa
gtgaagataattgtgacaacagaaggtaaggaaaatgagggcgaagaggaacgaggagca
acaggatgtggtctgcataaatttagtattatagatgaagaaatgaacctggagaccacc
tggtaccacactgacccacgggtcaccagcagcttctccagcttgtccagcggctctttg
agtgctgcactggaggagagcagtgccgctgctaaagccccatctcgcatggacgcactc
cgtggaccacgcacagctgaggacctacaaagcttggacgttcaccacccctacctccta
gagccaaaacgccgccagggccctctgcgacccaccaacctcaattaccgtggaaatgac
aactcttgcctttgctttgctgagctctccaaggctgatttcctccctagcccgcctggg
gctactactgacgacgacgacgacgatgacgaggaggaggaggatgagcacggagtggag
gaactcagacgcatttccaagatccctagctcaagagatttgagaatgattgacagcata
ccctttcaaagatcaccaattaaaagaaagaaaaaggtacctcccaaagtcccaatgagg
acgagttcaattcccgggcacaaagcagaacaggctgagcagcgcctctccaaggacgaa
gagggtctattcctgaccccgtcacccaaccctaaaccagctcttttagtcaaagagact
gtctcagagtctgaggatgagttttttgatgcacaggagagatttactcccccagttcct
gatctatcagatgctgaactggccgaccggcgaaatgctaatcggttgagtggaacctgg
aatggtgttccagctgcgccagggaaagagccatccccacaatcctctaaaataaagaag
caagtggagacacttaaagggaccacaaatcaacttaccaaccaacagcccagtccaaca
aagccatcacagaaacctgaagttaaagttaaaccaccactggcacctaagccccagctg
cctcccaaacctcagatcattcctcccaagtccccccagcatggacgatcatatgcccac
tgcaatggggatgcctctggacgtctgtcctctgaactcctggaaatggagccggacacc
atggagttcaagtctgtcacatccggggcaggtggactgcctctgtcatcacctttgatc
acagcagtgaggtgcagcaagcaacccctacaaatcacaacaccacaacctgaggaaaag
accaagaggcaagaaaacagctcgaaacagaagaaagatgtgatgcatgagagtggggca
catgtggtttccaaagacaaagcaaacattcctgatgaaaaagaaactcctcaagttgaa
gggaaaagcaatgggactatcctacctgcaaagaggccgccgaacctaccccctatccct
cactctaattcaggtgaaaagctagctgttccccctccagtgccccccaaacccacttct
cccaccaatctccaccctttgtcaatacctgctagctctcctgtctcccccactgatcca
agcaaaggggtcttcaaggatagcgttagtccgccaaatggaatccacccctggagcagc
cgcaatggcagcatccagtcaggaccacggagggtctctctgagtcacgagagcctctca
cccaaaaatacagatgcacctcttacccttaccacctccctcacttcaaccaactctaaa
ggtgttgggggcctagaaagtagagaacctggaagatctggatcaggatcagacctgagg
accagctcgtccagcctgggaggcaggctaccagcctctgccctgagagggaggatccag
gctctgccttggtacatgacccgttcccaggagattttgggaactctggactatccctcc
acaagctccatcaatggagacacatctggctttggctctggtttgtctgtagccagtggt
ttatcggatttaaacaaaactccggtcaaggaaaaagagacagtggtttcaaaatcagga
gggaaagggaacattttagaggatggagctgaggttgtcatagccaccatcaaagaggcc
caggatgtgacttcacacatgaaaaaggccaacgggacaaacggctcacaccctaatctg
acttttaaagagaatagttcgaacagtggcagtgtttcatcggagcagcctcagtcacgc
ccccactcagcagtggggttgggaggtgtgtccagtatgcaaattggaggtgactcacca
acctcctcactcgcagacagtactccaccacagcagcaccgagaggcttgtggctgccgc
accgtttacgccaactgtttcagcggcgacaccgaggatggtgtcagttttgatgaagag
cttactgtttacgagttctcccgccgcacacggcccaaacctgcccggcaggcacctgtc
ccttctcctacaacaccccctccaaaccccaacattttgtctctgctgagagacaacccc
cgcccgctctctactttctccactgcctcctctgaactcagtcccctagtttcacgtccg
gtttcccccacaacgtctttcggtggtcctcttcgttctcttaccaacaagaattacggt
gggctgaaggggggttttgcctcccttcgccaagatatagatcagcttctgctagtctta
gagagaggtgcacttgggcaaccacaacatacattttgtccagattcaaagcaggatatc
acaggcataaaagtggggcctgacctaaatcacaatggaactgaagacggtactacccca
gaaccaggctcaaactgtactgggacaagccctactgccatgacagaggctgagaggagt
cttctccaggcagaggctcgacgattggcatccgggtgtcagcgggccacacgtgtaggc
tgggctcccgatgaagctctacgttctttatccaacagcttcagcgctttggttcagttg
tctgccgcttgcctgcgaacaaacccctgctctggctgtgacatgtgccataatgcgagc
ctggtccacggggatgaggatgatgacagtcaggaggccatggacaagctaaaggagatc
gtgggtctgtaccgggagtttgttggggctgttgagacagctggaactggtgctggggtt
gggggtaagagtgtgggcctcaatgggtctggacagggtcagggggagagtgacggggtg
aggctactggccaaacgctgcaccgtgctcatctcctctgtattcgcactcacacagctc
ttccggacacgcacactagacacctcgaacacgcccggccacgtacctctcaacttttga
DBGET
integrated database retrieval system
