Seriola dumerili (greater amberjack): 111226439
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Entry
111226439 CDS
T05606
Symbol
spock1
Name
(RefSeq) testican-1 isoform X1
KO
K08136
testican
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sdu00535
]
111226439 (spock1)
Proteoglycans [BR:
sdu00535
]
Extracellular matrix (ECM) proteoglycans
Others
111226439 (spock1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
EF-hand_7
T7_gp14
Motif
Other DBs
NCBI-GeneID:
111226439
NCBI-ProteinID:
XP_022607304
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MFFFLLPVVALLLSRETGVSGNSNDKWLSTVAQYKDRSWNRFRDEAEDDYFKSWAPAMSL
DQEREAEPDRYGDPGTKAHPGLAKKTVQEGPDATKDPCLKVRCPPHKVCVSHDYQTAVCT
NHKQPAHSVKPRKGSVGHKQRLEAGPHGKCRLCSALHSTPVCGSDGHTYSSKCKLEFHSC
LSGKTISVKCDGLCPCLPGLELGSPPHKTEKAACTDTELHSLAARLKDWFGVLHLDANRD
LKSSDSFDSATGHFDTSILPICKDSLGWMFNKLDMNFDLLLDQSELSAIYLDKYELCMKP
LFNSCDSFKDGKLSNNEWCYCFQKPEGLPCQTEKSRIQNQSRRKSLIGSYIPRCTEEGYF
KPTQCHGSTGQCWCVDKYGNEIAGSRKQGNPNCDEDQETSGDFGSGGAVILLDDQEEEPS
QSVRSRQKKRRGRIHPRGAIEDDEDEEDDKDDEIGYVW
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctttctgctacctgtcgtggctctcttgctgagcagagaaacgggggtctcc
ggtaacagtaacgacaaatggctgagcaccgtggctcagtacaaggacagatcctggaac
agattcagagatgaagccgaggatgactacttcaaaagctgggctcctgccatgtctcta
gaccaagagcgagaggccgaacctgatagatatggagacccgggaactaaagcccacccc
ggcttagccaagaagacagtacaggagggcccagatgctaccaaggatccatgtctgaag
gtgcgctgtcctcctcacaaggtgtgtgtcagccatgactaccagacagccgtctgcacc
aatcacaagcagccagctcacagtgtgaaacccaggaaaggtagtgtgggccacaagcaa
agacttgaagccggtcctcatgggaaatgtaggctctgctcagccctccactcaactcct
gtgtgtggatctgatgggcacacctactcctctaagtgtaagctggagttccacagctgc
ctctctggaaagacaatctcagtaaaatgtgatgggctgtgtccctgtctgcctggtctg
gagctcggcagtccaccacacaagactgagaaggctgcctgcactgacacagagcttcac
agtctggctgccagactgaaggactggtttggagttctccacctcgacgccaacagagat
ctgaaatcctctgacagctttgactctgccactggacactttgacaccagcattttgccc
atctgtaaggactcgctgggctggatgttcaacaagctagacatgaactttgacctcctg
ctggaccaatcggagctgagcgccatctaccttgacaagtatgagctgtgcatgaagccc
ctcttcaactcctgtgactccttcaaggacggcaagctgtcgaacaacgagtggtgttac
tgcttccagaaacctgagggactgccttgccaaaccgagaagagcaggatccagaatcag
agtcgaaggaagagcctcataggctcttatatccctcgttgcactgaggagggctacttc
aaaccaacccagtgtcatggcagcactggccagtgttggtgtgtggacaaatatggcaac
gagatcgccggctctagaaaacaaggcaaccctaactgcgacgaggaccaggagacatca
ggggattttggcagcggcggtgcagtcattctcctcgacgaccaggaggaggagccatca
cagagcgtccggagccggcagaagaagagacggggccggatccacccaagaggagccatc
gaggacgacgaggatgaggaagacgacaaggatgacgagatcggctacgtttggtag
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