Seriola dumerili (greater amberjack): 111226510
Help
Entry
111226510 CDS
T05606
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111226510 (rlim)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111226510 (rlim)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111226510 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
111226510
NCBI-ProteinID:
XP_022607420
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MEGSDSLDQSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFNRLQQIKDGPEQQNNTPSAETGEDPVVQPESSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPEESPEGQEVGA
NVEPQVPMETEVVEEPVVEELAVIVEPEPELEEVVSQEILGEPPSSPAAPPVQPPLSPSP
RRGQRRARSRSPEPRRTRARTARSRSPLSLDQLDGLANLRQAHSSQGPNTATSAPPVPQV
EGSSRTRQHVLSRQSTADSDVQPPRAVAELVPEAQNVESQEGEAAGGEGGGEGGAAGRRP
PTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVR
TYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTP
SDLGEALNNPDATPAAAPAADVDEPPVAAGVRARTVETDTVEGLATVPPASGGRARPRPP
ISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEY
AEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtctagaccagagtggcagtgaccagccagagtcacaacgcagg
aggcagctggaccggctggatagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaagactatcgtctcatgagagacaacaatctcttaggcaccccaggggaggtaaca
gaggacgaactgtttaatagacttcagcaaatcaaagatggtccagaacagcagaataac
acacctagtgctgaaactggagaagatccagttgtacaaccagaaagctctgaggatcct
gccagtggggatagtctcctggattggctgaacacagtgaggcgcacaggcaacacaacc
agaactggtcatcgtggaaaccagtcatggcgggcagtcagccagaccaacccaaacagt
ggcgattttcgcttcagccttgaaatcagtgtgaaccgtaaccttgctgagcagcaggcg
gctgctgaaggggagcaggagtctccagaggagtctccagagggtcaagaagtgggggca
aatgttgaaccgcaggtccccatggagacagaagtggttgaagaaccagttgtagaggag
ctggctgtcatagtggaaccagagccagaactagaagaggttgtttcacaagagatttta
ggagaacctcccagctcgcctgctgcccccccagtacaacccccactttctccctctcca
cgcagaggacaaaggagagcccggagccgcagtccagaaccacgcaggaccagggcccgt
acagcaaggagccgctctcctctcagcttggatcagctggatggtcttgctaatctacgt
caggctcacagttctcaaggccctaacactgccaccagtgcgccccctgtgcctcaagtg
gagggcagttcacggactcgacaacatgttctttccaggcaaagcactgctgacagtgat
gttcagccacctagggctgttgcagaattggtcccagaggcccaaaatgttgaatctcag
gaaggagaagctgctgggggagaagggggtggagaagggggggcagcagggcgccgtccc
cctactattatgctcgatctccaggtgcgacgtgtgcgtccaggtgaatatcggcaaaga
gacagcattgccagccgcacccgctcgcgctcccagaactcaaacaacacatttctttat
gagagtgagcgtggtggatttcgtaggactttttcacgctctgagcgtgctggtgtgagg
acctacgtcagcactattcgcatccctattcgaagaatctctgatgcaggtttaggagag
gcaacctcaatggctctccaatctatgattaggcagattatgactggttttggtgaactt
ggctacctcatggattcagactctgattcttcagattcaaaccgtggagccaacacacct
tcagatctgggtgaagccctcaacaacccggatgctactcctgctgctgctcctgctgct
gatgttgatgaaccacctgtggctgctggagtcagagcaaggacagttgagactgatacg
gttgagggccttgccactgttccacctgcttctggtggcagagctcgaccgagaccgcct
atcagcctagaggagcccagctcattgcccttcctacggctcgcccacttcttcctccta
aatgatgacgatgaagaccagccccaaggactgacaaaagagcagattgacaacctctcc
atgcgcaactttggtgagagtgatgccttgaagacttgcagtgtctgcataacagagtat
gcagaaggtaacaagctgcgtaagctgccctgttctcatgagtaccatgtgcactgcatc
gatcgctggctgtctgaaaactccacttgccccatctgccgcagggctgtcctggtatcg
gccaatcgagaaagtgtggtgtag
DBGET
integrated database retrieval system
