Seriola dumerili (greater amberjack): 111226760
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Entry
111226760 CDS
T05606
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111226760
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111226760
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111226760
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111226760
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111226760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Ig-like_KY
Motif
Other DBs
NCBI-GeneID:
111226760
NCBI-ProteinID:
XP_022607792
UniProt:
A0A3B4TWN8
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MGHGTPDNMNWAGLLQNLLLLVHLRQIICGSVWFSVPEEQEPGTLAGSLSRHFPPPYQLL
TQEYLWMDTNTGNFYTTEQKMDREALCPEETKAEECIIIHNAIVRPSGDLIQFPVIIEDI
NDNAPHFENSEIHLRVSEDVTVGTSYLLDDQAQDRDAGLNGELLYHLEDSDGVFSLKVEA
DGPFIMLVVQTALDRETQDQYRMALVATDCGADPLSATATLIVTVTDVNDNCPSFSSDSP
RSVTIPGDSPKNMLVAQVRATDPDSGPNAAIVYSLSPKVSERAKKLFSLDSLTGYIRLTQ
DLHSDNSEELVLKVLASGHHCPPADTQVTVSVIPMVNQDLTIKIGFIAEHQNQTMVLPEN
QPPTVLAVLELEGDSNIKGSSLAIEGEVPFTLSPQNGKYLLSTSKPLDYEMKREHHISVV
VHRRSGEASVIIPSKHVIRVLVADVNDNAPHFLQSQYQLEVEENNEPGMPLLQVSASDAD
SGHNGRVTYKLDNHTSTIFNIDPVTGQLCVSATLDREQQGVHKLTVFARDSGSPPLESVT
TVTVRVLDQNDNAPVFLTPHFIFFIPENVPPFAQVGRVGVTDPDEGENGNTELHVVNSSG
PFVVDNTQGTLHTTTSLDRETEDRYELYLLASDHGHLLTLTSSARVTIFVEDINDNQPKV
ILPSSNSSCLTVSPSAMAGTMVTKIYAIDEDSGLNSEITYSVVAPEPVQNSSPFQVDSRS
GNITLAQQLLKKDLGMHHLFIVVRDGGKPIPFYSTVWINLLVNDSMEPCHLDRPPTWAGT
PDLVQTPSRAPICELESPKAAQLTLLAGLGLMLASTCLFVVTVILYLKQRRRSRLRQNKR
GPIEENKIPFRHKDKYYCDD
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcctgataatatgaactgggctggactattgcagaatctgctgctt
ttggtccatcttaggcagatcatatgtgggtccgtctggttttctgtcccagaggaacag
gagcctggtactctggccgggtcacttagtagacactttccacctccgtaccagctgctg
acccaggagtacctgtggatggatacaaacacagggaatttctacaccactgagcaaaag
atggatcgtgaggccctctgccccgaggagacaaaagctgaggaatgcattattatacac
aatgccatcgtgaggccctcgggagaccttatacagtttcctgtgatcatagaggacatc
aatgacaatgcacctcattttgaaaacagtgaaatacacctgagggtgtctgaggacgtg
actgtaggcaccagttacttgttggatgaccaggctcaggacagggatgccggccttaat
ggagagctgctgtaccacctagaagattctgatggagttttcagtttaaaagttgaagca
gacgggcctttcatcatgctggttgtgcaaacagccctggatagggagactcaggaccag
tatcggatggcgctggtggccaccgactgcggcgcagatcctttaagtgctacagcaact
ttaatagtcacagtgacagatgttaatgacaactgtccaagctttagctctgacagccca
cgcagtgtcaccatccccggagactccccaaagaacatgttggttgctcaggtcagagcc
acagacccagattcaggcccgaacgctgccatcgtttattccctcagtcccaaagtctct
gagcgggccaagaagctctttagtctcgacagcctcactgggtacatcagactaacgcag
gacctccatagtgacaactcggaggagctggtgttgaaagtgttagcgagtggtcatcac
tgccccccagcagacactcaggtaaccgtatctgtgatccccatggtgaaccaagacctg
acgatcaagatcgggttcatagcggagcatcaaaaccagactatggtgttaccagagaac
caaccccccactgttttagctgtcttggagcttgagggtgacagcaacattaaaggctca
tctcttgccattgagggcgaagtgcctttcactttgagcccacagaatggcaaatatcta
ctttccacatcaaagcccctagactatgagatgaaaagggaacatcatatttctgtggta
gtgcataggagatcaggtgaggcgtctgtgatcattccttctaagcatgtgatcagggta
ttggtggcagatgtcaatgataatgctccacatttcctccagtctcagtaccagctggag
gttgaggaaaacaatgagccaggaatgccactgttgcaggtctcagcttcagatgcagac
agcgggcacaacggtagggtgacctacaagctggacaatcacacatctaccatctttaac
attgacccagtgacaggtcaactgtgtgtgtcagccactctggatagggaacagcagggg
gtacacaaactcactgtgtttgcacgagatagcggctctcctcccttggagtccgtgacc
acggtaaccgttcgtgttctggaccagaatgacaatgcacccgtttttctaactcctcac
ttcatctttttcatccctgagaatgtaccaccgttcgcccaggtggggagggtcggggtg
acagacccagatgaaggggagaatgggaacacagagttgcatgttgtaaacagcagtgga
ccatttgttgtggataacacccaggggacacttcacaccaccaccagcttggaccgcgag
acagaggaccgctatgaactgtacctgctggccagcgatcatgggcacctgctcactttg
acatccagtgccagggtaactatctttgtggaggacatcaatgacaaccagccaaaagtg
atccttccaagcagcaactcctcatgcctgactgtctctccttctgcaatggcaggaacc
atggtgacaaagatctatgccatcgatgaggactcagggctgaattcagagattacatac
agcgttgtggcgccagagccagtgcaaaacagcagccccttccaggtggactcaaggtca
gggaacatcaccttagcccagcaacttctaaagaaggacctgggaatgcatcacctgttc
attgtggtcagagatggggggaaaccaattccattttatagcactgtctggattaatctg
ttggtcaatgacagtatggagccctgccacttggacagaccacccacctgggcaggaaca
cctgacttggttcaaactccctcaagggcccccatttgcgagctagagagtccaaaagct
gctcaactgaccttgttagcaggcctgggtttaatgctggcatccacatgtttgttcgtg
gtgacagtcattttatacctgaagcagaggagaagaagtcgtctaagacagaacaagagg
gggcccattgaagagaataagattccattcaggcacaaagacaaatattactgtgatgac
taa
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