Seriola dumerili (greater amberjack): 111226995
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Entry
111226995 CDS
T05606
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111226995
04020 Calcium signaling pathway
111226995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111226995
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111226995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
111226995
NCBI-ProteinID:
XP_022608053
LinkDB
All DBs
Position
Unknown
AA seq
2251 aa
AA seq
DB search
MVSSPWFERISIMVILLNCVTLGMYQPCENIDCTSDRCQILQAFDAFIYIFFALEMVVKM
VALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPS
MRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENFTLSSGMTLP
APYYQPEEDDERPFICSLASDNGIMSCTDVPARREGGRTCCLDKEDALHRQALGLSPEPL
ANGSGAGEAMGLCINWNQYYTRCHTGNSNPHKGAINFDNIVYAWIVIFQVITLEGWVEIM
YYVMDAHSFYNFIYFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSS
TLASMAEPGDCYEEIFQLVCHVLRKAKRRSAALYYTLRGKPPPPGGGRGNRRAGGNVNGE
RHHSRHPRSSHCPHQNKQDHGSQPLANSISLSVPQNPEDCPICKLSLKEGARAVGDSANE
EEDEEDAVKETGKEENHLEERGDGERKRKRSCFGQCRDIWNDMRRKLWGIVESKYFSRGI
MIAILINTISMGIEHHNQPEELTNVLEICNIVFTSMFTLEMILKLTAFGFFEYLRNPYNI
FDGIIVIISVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFC
MLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMV
LYNGMASTSPCAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDRSSCNFE
ENDKQKDSLHLSDPKICTLTPNGHLDLSSLPAGLFPGERLTFALGSRKNSVISLGRANLE
QRAVYPGRGYHNWGRPVSPQPQALWARRSSWNSLGGGRPCSSSSPSASPAFNPTSARPFY
GYGLGSLGGVVGGSLRIRGPRASSSPHRHLHHVHPDEEESLLSPPAVAPPVTQLHLPHPM
LPGHFVPRRDRRALSLELPHLLQVPGPPHPPPPPHHPLPPMTLHAHHRKKSFSGGVVISG
GGGGGGLDSLGVLGGVHQDCNGKTPLSQLLQPPPRQHNEQAGGANPQSQLMADVFPQVNA
RSKDREDLDDDIEYSLCFRIQKMLEAYRPDWCETREDWSVFLFSPQNKFRQMCQSIIAHK
LFDYVVLAFIFSNCITVALERPKILQGSLERVFLTISNYIFTAIFVGEMTLKVVSMGLYV
GEQAYLRSSWNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGL
KLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCLGPDVKNITNKSDCLQA
NYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVAVDQQPVINNNPWMLLYFI
SFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAQKLPYYSS
YGHMRLMIHTLCTNHYLDLIITFIICINVITMSLEHYNQPHSLDLALKYCNYFFTSTFVL
ESVLKLIAFGVRRFFKDRWNQLDLAIVLLSVMGITLEEIEISAALPINPTIIRIMRVLRI
ARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPC
EGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHGTDVDYACNPSLQFISP
MYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAAEEAEMDAEIELELAQGTLCCMGAPTC
GGGGVEKGLVAAAGSGPGGTAGGRDRGERGEGVRKMRHAAAAALQGPYNSRNSSRTLYSP
AQESQWLDSVSLLIKDTLEGEMLMIDNLSGSVFHHYSSPPPICKDCKGHPQEIKMAEIEQ
ASLKSEQLSDKSSSPALPDDLSLDEHTAYQLLAREGKGRCSSDSRSSEEAGGVGGHQTHT
VVQSQPCRALCTGVEMETTLQEMEMQTHQTNMCSTHCSPEFFHPAAAVIPAPPRSRSLRL
TRGLRLTSPASWASLRSPGAHSKMLCTQFPSHSDSSLATGSSEGSLQTTLEEGLSFSISP
PQNLELPLPTAPLPVVCPLPMPEDRTILSSPVQTLRPRPSPSSALTLQATRGHQRSQSSG
RGSTSPGYTRDDSIDPSDEDLGIGIGSSIGGCGSSQAGNSEHLSETLSSLSLTSLLSPSS
LVYPGGAVKKCNSTGSLDQGGMLLSSRGKEGRREILGLELMDPQGFLANPWTGVLVDTRR
GDGRGEIGDGEQGFKGKSSSQTTVGPCRKNR
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atggtctccagcccgtggttcgagaggattagcatcatggtgatcctgctcaactgtgtg
acactgggcatgtaccagccctgtgagaacatcgactgtacctcggaccgctgccagata
ctgcaggcctttgatgcattcatctacatcttctttgcattggagatggtggtaaagatg
gtggctcttgggatctttggccgacgctgttacctgggagacacctggaacaggctggac
ttcttcatcgtcatggctgggatggtagagtactcactggacctgcagaatattaacctg
tcggccattcggacggttcgggtcctccggcctctcaaagccatcaacagagtgccaagt
atgcgaattctggtgaacctgctactagacactctacccatgctgggcaatgtgctgctg
ctctgcttcttcgtcttcttcatcttcggcatcatcggcgtgcagctgtgggcggggcta
ctgaggaaccgctgctatcctgaggagaacttcaccctatcttcaggtatgacactgcca
gctccgtactatcagccggaggaagacgatgagcgccccttcatctgctccctggcgtct
gataatggcatcatgtcatgtactgatgtgcctgcgaggcgcgaaggagggcgcacatgc
tgcctggacaaggaggacgcgctccacagacaggctctgggcctgagtccggagccactg
gctaatgggagtggtgctggtgaagcaatgggtctgtgcatcaactggaaccagtattac
acccgctgccacacagggaatagtaacccccacaaaggtgccatcaactttgacaacatt
gtctacgcctggattgtaatttttcaggtgatcacgctggaaggctgggtagagatcatg
tattatgttatggatgcccattccttctacaacttcatctacttcatcttactcatcatt
attggttcattcttcatgatcaacctgtgcctggtggttatcgccacccagttctccgag
accaaacagcgggaacaccagctgatgcaggagcaaagggcgcagtgcctgtcctcctca
accctggccagcatggctgagccgggagattgctatgaggagatcttccagctggtctgc
catgtcctccgcaaagctaagaggagatcggcagctctctactacacgctgaggggcaag
cccccgccacctggtggaggcaggggtaacaggcgcgctggagggaatgtgaacggagag
cggcatcattcgagacacccaagatcatcccattgtccgcatcaaaacaagcaagaccac
ggctctcagccactagccaactcaatcagtctgtctgtccctcaaaatcccgaggactgc
cctatatgtaaactgtcgctgaaagagggggcaagagctgtgggagattctgccaacgag
gaggaagatgaggaggatgctgtgaaagagacgggcaaggaggagaaccacttagaggag
agaggagatggggagaggaagaggaagaggtcatgcttcggacaatgtagggacatttgg
aatgacatgaggaggaaactctggggcattgtggagagcaagtacttcagcaggggcatt
atgatcgctattctcatcaacaccatcagtatgggcatcgagcatcacaaccagcctgaa
gagctgaccaacgtcctggagatctgcaacattgtcttcaccagcatgttcacactggag
atgattctcaagctgactgcttttggcttcttcgagtacctgaggaacccctataacatc
tttgatggcatcatcgtcatcattagtgtgtgtgagataatcggccaggcagacggcggt
ctgtcggtgctgaggaccttcaggctgctgagggtcattaaactggtgaggttcatgcct
gcgctgaggcggcagctggtggtgctgatgaagacgatggacaacgtggccactttctgc
atgctgctcatgctcttcatcttcatattcagtatcttggggatgcatatatttggttgt
aagttcagtctgaagacagaggcaggagacacagtgcccgacaggaagaactttgactcc
ctgctctgggcaatcgttactgtctttcagattctgactcaggaggactggaacatggtg
ctgtacaatggcatggcctccacatcgccctgtgctgctctctattttgtggctcttatg
acatttggaaactatgtgctcttcaatttactggttgccatcttggtcgagggtttccaa
gctgagggtgatgcaaaccgctcttactcagatgatgacaggtcttcctgtaatttcgag
gagaatgataaacagaaagactctctgcatctctcagatccaaagatctgtacactgacc
ccaaatgggcacttggacttgtcctcgctgcctgctggtctgtttccaggagagaggtta
acctttgctcttggctccaggaagaacagtgttatttctcttggcagggccaatctggag
cagagggctgtgtatccaggtcggggttaccacaactggggacgcccagtgtctccccag
cctcaggccttgtgggcccgtcgttccagctggaacagcctgggaggcggccgcccctgt
tcttcctcatctccctccgctagtccagccttcaaccccacctctgcaaggcccttctat
ggctacggcctgggtagtttgggaggagtggttggaggaagccttcgtatccgtggtccc
cgagcctcctcatccccgcaccggcacctccaccatgtccacccagacgaggaggagtct
cttctctcccctcctgctgttgctcctcctgtcacccagctccaccttccccatccgatg
ctcccaggtcactttgttcccaggagagaccgcagagctctatcactagagctgccccac
ctgctgcaggtcccaggacctccacaccctccaccaccgccacatcacccacttcccccc
atgacgctccatgctcaccacaggaagaagagcttctctgggggggtggtaatcagtggt
ggaggtggtggcggtggactcgacagtctgggtgtcttaggaggggtccaccaagactgt
aatggaaagactccactgtctcagcttctccagccccctcctagacaacataatgaacag
gctggaggggcgaaccctcagagccaactgatggctgacgtcttccctcaagttaacgca
cgaagcaaggaccgggaggacctggatgatgacattgaatatagcttgtgcttccgcatc
cagaagatgttagaagcgtatagacccgactggtgtgagaccagagaggattggtctgtc
ttcctattctcaccacagaacaagttcagacagatgtgccagtccatcatagctcataag
ctgtttgactatgtggtgctggccttcatcttctccaactgcatcacagtagctctggag
aggcccaagatattacagggcagcttggaaagagtctttctaaccatctccaactacatc
tttactgccatctttgtgggcgagatgacactcaaggtggtttccatgggtctgtatgta
ggagaacaggcttatctgcggagcagctggaacgttctggatggcttcttggtttttgtg
tctttgattgacattgttgtgtcaatggcgggtggggccaagatcctgggggtgcttaga
gtactcaggctgctcagaacattgcgccccctcagggtgattagcagagctcctggtctg
aagctggtggtggagaccctcatcacttctctcaaacccatcggcaacattgtcctcatc
tgctgtgctttcttcatcatctttggcattcttggggtacagctgtttaaaggcaagttc
ttctactgcttgggccctgatgtcaaaaacatcaccaacaagtctgactgtctccaagcc
aactacaagtgggttcaccataagtacaactttgacaacctgggacaggctctgatgtcc
ctgtttgtactcgcctccaaggatggctgggttaacatcatgtatcacggcctggatgct
gtggctgtggaccaacagccggtgatcaacaacaacccatggatgctgctgtatttcatc
tccttccttctcatcgtcagcttcttcgtcctcaacatgttcgttggcgtggtggtggag
aacttccacaagtgccgccagcaccaggaggtggaggaggccaagagacgagaggagaag
cgtcagcggcgcatggaaaagaagaggaggaaagcccagaagctgccctactattccagc
tatggccacatgcgcctgatgatccacacactgtgcacaaaccactacctggacctcatc
atcactttcatcatctgcatcaacgtcatcaccatgtccctagagcactacaatcaacct
cattctctggatcttgccctgaagtactgcaactatttcttcacctccacttttgtgctg
gaatcagtactcaaactcatcgcctttggtgttcgccgcttcttcaaagacaggtggaac
cagctggacctggccattgtgcttctgtcagtgatgggtatcaccctggaggagattgag
atcagtgctgccctgcccatcaaccccactatcatcaggatcatgagagtactgaggata
gcacgagtgctgaagctgctgaagatggcgacaggaatgagagccctgttggatacggtg
gtccaagccctgcctcaggtgggtaacctgggcctgctcttcatgctgctgtttttcatc
tacgccgccttaggagtagagctttttggagaacttgtttgcaatgaagactacccatgt
gagggtatgagtcgtcacgcaacttttgagaactttggcatggccttccttaccttattt
caagtctccacgggcgacaactggaatggcatcatgaaggacacattgcgggaatgccca
ccagaccacggcactgatgtggactatgcctgcaatccgagccttcagtttatctcgcct
atgtactttgtctccttcgtgctcaccgcccagttcgtgctcatcaacgtggtggtggcc
gtgctgatgaagcacctggacgactccaacaaggaggccgcagaggaggcggagatggat
gcagaaattgagctggagctggcccagggcaccctctgttgcatgggcgcccccacttgc
gggggtgggggggtagagaagggactagtcgctgctgctggatcagggcctggaggcaca
gcaggagggagggacagaggagagaggggagagggagtgaggaagatgcgacacgcagca
gctgctgcactccaaggaccatacaactcccgcaactccagtcggaccctgtactcacca
gcacaagagagccagtggctggacagtgtatctctcctgatcaaggatacgttagagggg
gagatgctgatgatcgacaacctctccggttctgtcttccaccactactcctctcctcca
cctatatgcaaagactgcaagggccacccacaagagatcaagatggcagagattgagcag
gcgtcgctgaagtcggagcaactgtcagataagtcctcgtcccctgccctgccagatgac
ctcagcctggacgaacatacggcctaccagctgctggcgcgggagggcaagggaaggtgc
agcagtgattcccgtagctctgaggaggctggaggtgtcggaggccaccagactcataca
gtagtgcagagccagccctgcagggccctctgcaccggtgttgagatggaaaccacacta
caggagatggagatgcaaacacaccagacaaatatgtgctcaacgcactgcagccctgag
ttcttccaccctgcagcagcagtcatcccggcgcctccccgcagcaggagcctgaggttg
acaaggggcctcaggctgacctccccagcctcctgggcttcgctccgctccccaggagcc
catagcaagatgctgtgtacacagttcccctcccacagtgactcgtccctcgctacaggc
agctctgaaggcagcctccagaccaccctggaagaaggactgagcttcagcatctctcct
ccacagaacttggagctgccattgccgacagctcctttaccagttgtgtgccccctcccg
atgcctgaagacaggactatcctttcctccccggtgcagaccctgagaccgaggccgagc
ccctcatcggctctaaccctccaggccaccaggggccaccagcggagccagagcagcggg
cgaggtagcaccagcccaggctacacccgcgacgactcgattgacccttcagatgaggac
ctgggtataggcattggatcgtctattggcggttgtggctccagccaagcgggcaacagt
gaacacttgtcagagacactgagcagcttgtcgttgacatcactgctgtcacccagctcc
ctggtgtacccgggaggagcagtgaagaagtgcaacagcacaggcagcctggaccaaggg
gggatgttgctgtcgtcccggggcaaggagggccgcagggagattctgggcctggagctt
atggacccccagggcttcttggccaacccctggacaggggtcttagttgacacgagaaga
ggagacggaagaggagaaataggagatggagagcaaggattcaaagggaagagctcaagc
caaacaacagtagggccttgtcggaaaaacagatga
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integrated database retrieval system
