Seriola dumerili (greater amberjack): 111227055
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Entry
111227055 CDS
T05606
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00310
Lysine degradation
sdu00514
Other types of O-glycan biosynthesis
sdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111227055
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
111227055
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdu01003
]
111227055
Enzymes [BR:
sdu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
111227055
Glycosyltransferases [BR:
sdu01003
]
O-Glycan biosynthesis
O-linked Gal type
111227055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
111227055
NCBI-ProteinID:
XP_022608154
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSGANFACLPAALLLLLLSCCSPARGYFAEERWSPESPLLAPRILVALICRNSEHSLPYF
LGNIERLNYPKDRMALWVATDHNEDNTTAILRNWLVQVQSLYHYVEWRPKEEPRRYADED
GPKQWTDLRYEHVMKLRQVALEAAREMWADYFMLADCDNLLTNPDVLWKLMKENKTIIAP
MLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKQVRKGCFAVPMVHSTFLIDLRKEASRQL
AFHPPHPDYSWAFDDIIVFAFSARMADVQMFVCNKETYGNFPVPLRSHNTLKDEVDSFLH
SLLEVNVRNSPVMPSKYIRVPRKHPDKLGFDEVFMINLQRRTDRRERMLRALYEQEIACK
VIPAVDGKAMNISEINAMGIHMLPGYSDPYHGRPLTKGELGCFLSHHKIWKEIVERRLHT
SLVIEDDLRFEVFFKRRLMNLMSEVEDEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEA
DYSYWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMYNKHPVSDYMDQFETRDLNAFS
AEPLLVYPTHYTGDEGYISDTETSTVWDNDKVRTDWDRARSGKTREQAEISTEAQNSDVL
QSPLDSTARDEL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgcaaacttcgcctgcctccccgccgcgctactcctcctgctcctgtcctgc
tgcagccctgcccggggatattttgcggaggagcgctggagccccgagtctccgcttctc
gctccccggatcctcgtcgccctgatctgcagaaactcggagcactctttgccctatttc
ctaggcaacattgagcgcctcaactatcccaaggaccgtatggctctgtgggtagcaact
gatcacaacgaggacaacaccacagccattttgcgtaactggctcgtccaggtgcagagc
ctttaccattatgtggaatggaggccaaaagaggaacccagacgttacgcggatgaagat
ggtccgaagcagtggacagacctccgttatgagcatgttatgaagcttcggcaagtagca
ctggaggcagctcgtgagatgtgggcggattactttatgttggcggactgtgataacctc
ctcaccaatcctgatgtgctctggaagctcatgaaagagaataagaccattatcgctccc
atgcttgattcccgtgcagcctattccaacttctggtgtggaatgacctcgcagggttac
tataagcgcacccctgcctacatacccataagaaagcaggtgcgtaagggctgttttgcc
gtacccatggtccactccaccttcctgatagacctcaggaaagaggcatccaggcagctg
gcctttcacccgccacacccagactacagctgggcttttgatgatatcattgtgtttgcc
ttctctgctcggatggcagatgtgcaaatgtttgtatgtaacaaagagacctacggtaac
ttccctgtgccccttcgatcccataatactttgaaagatgaagttgacagcttcttgcac
tccctgctggaggtcaatgtgcgaaattccccagtgatgccttccaaatacatacgtgtt
cctagaaaacaccctgacaaactgggctttgatgaggtgttcatgataaacctgcagagg
cggactgaccgccgagaacgtatgctgagggcattgtacgagcaggagattgcttgtaag
gtcattccagccgtagatggaaaagcgatgaatatcagtgaaattaatgctatgggcatc
catatgctccctggatacagtgacccctatcatggtcgcccactgacaaaaggagagctg
ggatgtttcctttcccaccataaaatctggaaagagatcgttgagcgacgcttgcacacc
tctctggtgatcgaagacgacctgcgcttcgaggtcttcttcaaacgtcgcttgatgaac
ttgatgagtgaggtggaggatgaaggactggactgggatctcatttatatcggtcggaag
agaatgcaagtggatcacccggagaaagcagtgcctaatatacacaacttagtggaagca
gactattcatattggacattaggttatatgatatcattacaaggtgctgagaagcttttg
aaagcagaaccactaaagaggattttaccagtggatgagtttcttcctatcatgtacaat
aaacaccctgtgtctgattatatggatcagtttgaaaccagggacctgaatgcattttct
gcagagcctcttctagtgtatccaacacactacacaggcgacgaaggctacatcagcgac
actgagacctccacagtgtgggacaatgacaaggtccgtacagactgggacagagcgcgc
tcaggaaaaacccgggagcaggctgagatcagcactgaggcccagaactcagatgtgctc
cagtctcctttggacagtacggcacgggacgagctatga
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