Seriola dumerili (greater amberjack): 111227116
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Entry
111227116 CDS
T05606
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sdu03037
]
111227116
Cilium and associated proteins [BR:
sdu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
111227116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
Motif
Other DBs
NCBI-GeneID:
111227116
NCBI-ProteinID:
XP_022608242
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWATYHGNLEALRLIVARGGNPDK
CDIWGNTPLHLAAANGHLSCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDSI
ASKQTGLNPKLVSKLKDRAFRDAERRIKECVKMQKKHHKRMERKFHKEASEASASDVMSF
SSYTSSSLSHKLRNFNAATVSVPYSQATLHATNRGKTKIQKKLERRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKDRGRRNVRDMFPRDNDDAISRAMSEPDLHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDLGGRDEASVDRSGNNVRLRSRLQQ
YPSLDADSIGSARSLQERNVEDLPWEEVELGLDDDDEPETSPLEVFLATQSMSEFFSIFK
REKIDLEALLLCSDHDLKSIHIPLGPRKKILDACKRRLESIEDPDCIEDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcggcccgggacggctacctggacctgctgaaggaggca
actcggaaggatctcaacgctccggatgaggatggcatgacaccgacgttatgggctact
tatcacggcaacctggaggctctgcggctcatcgtggcgagggggggaaaccctgacaag
tgtgacatatgggggaacacgccactccacctggcagctgccaatggtcacctcagctgc
cttttcttcctggtgtcttttggtgccaacatatggtgcctggacaacgactaccacacg
ccgttggacatggctgccacaaagaatcacatggattgcgtccgctacctagattccatc
gcatccaagcagacaggcctcaatcccaagctggtcagcaagctgaaggaccgggcattt
cgtgatgccgagcgacggatcaaagaatgcgtgaagatgcagaagaaacaccacaaacgc
atggagcgaaagtttcacaaggaggcttctgaggcttctgcgtcagatgttatgagtttt
tccagttacaccagcagctctcttagccacaagctgcgcaacttcaatgcagcaaccgtc
agtgtgccatattctcaggctactctccatgccacaaaccgagggaagacaaagatccag
aagaagctagagaggaggaaacaaggagatgggacctttaaaatctatgaagatggaagg
aagagtgtgcgctccctctctggacttcagctgggcaatgatgtcatgtttgtcaaacag
gggacatatgtaaacccaaaggaccgtggtcgccgcaatgttcgtgacatgttccccaga
gacaatgatgatgccatttcacgtgccatgagcgagccggacctccacggtcccgatgtg
gactattctgagatcagcaccgactctggacatgattctctgttcaaccggcccggtctg
ggcaccatggtctttaggaggaactacgtgagtggggggatgtttgaccttggtggtcgg
gacgaggcaagtgtggaccggtcaggcaataatgtgcgtttacgcagtcggctgcagcaa
tacccgagtctggatgcagacagcattggcagcgcacgcagcctacaggagaggaatgtg
gaggacctgccttgggaagaagtagaattagggctggacgatgatgatgagcctgaaacg
agccctctggaagttttcctagccacacaaagcatgagtgagtttttctccatcttcaag
agggagaagattgacctagaagcgctgttgctgtgctctgaccatgaccttaagagtatc
cacatccccttaggaccgaggaaaaagatcttagatgcgtgtaaaagacggctggagagc
atagaggacccggactgcatcgaggacacagaactataa
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