Seriola dumerili (greater amberjack): 111227162
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Entry
111227162 CDS
T05606
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111227162
03037 Cilium and associated proteins [BR:
sdu03037
]
111227162
Transporters [BR:
sdu02000
]
Other transporters
Pores ion channels [TC:
1
]
111227162
Cilium and associated proteins [BR:
sdu03037
]
Other cilia and associated proteins
Stereociliary proteins
111227162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
111227162
NCBI-ProteinID:
XP_022608300
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MAHSMSSSDDYENLGEGEPGQDSFLGYVREPAASTQRCPETLELDVVSGYTSTNTEDSCL
MGDDHMRDETLDTKQIKSLQRQRWSAATLKVLSSMPSRTAGQNSAAVNSRCSQLRQRHTP
SNDSSHPARPIQVDFSEVDVEESSTEENKEQLASDLRGLSVSEGVRKLRAMPLSLTDKMK
IRRLAFSDVAKSTLISRNIPCYSGLSMYVLRTWRHCLFNCLPILSSLQPWHSAMKRLSGR
FGTGVLSYFLFLRTLLRFNLLLFIINGLFVVMPQAIDPPIYDPHLHTFTGLQLLTGTGYL
SQSVMFYGYYTSTNSITGQMVSYSIPAAYLFSIAITFFVICIILVSSMSKSFGRSFHVLK
SNGDLAVKVFSTWDFKLSKKSSVRVQSERISTQLKELLSEMISGEDEKSCMQRLCFLLVH
LVAWATCLASIFMGAMGVHYLSEATIKPGPVRETELLLLSAVVSGINLLLPGLFNLSAWI
EKHDSPCVRVYVSIFRNLLLKISIVGVLCYRWLGRIAVEPESRDLKCWETFVGQELYRLL
LMDFIFTVLYTFLGEFLWRLFSEEVLKRDRKPVFDIARNVLELIYGQTLTWLGVLFAPLL
PAVQIIKLLVLFYMKKSSLMLNCQASRKPWRASQMTTLFISLLCFPSFLSAAVSVMYTIW
KIKPSAECGPFRNLTTMFQPEKLSAQEMKNSHPILSSLIWVYNSVVENPLFLFLACGVFL
MVIYFHTQVVDGQSRIISRLEKQIENEGKDKKFLITQLQAICEENSLVSSDKLARYDLIS
DKHLSFELIYAKMVANVGKLQGEQKYKKNLLQ
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcacacagtatgagctccagtgacgactatgagaacctgggagaaggtgaaccaggt
caggactccttcctcgggtatgtcagagaaccagcagccagtacccagagatgccctgaa
actttggagctggatgtggttagcggatacacgagtacaaatacagaagacagctgtttg
atgggggatgaccacatgagagatgagactcttgacacaaagcagatcaagtctctgcag
aggcagcgctggtcagctgctactctaaaggtcctctcttcaatgccaagccgcactgct
gggcaaaatagtgctgcagtcaattcccggtgttcccagctacgacaacgccataccccc
tccaatgattcttctcatcccgccagaccaatccaggttgactttagcgaggttgatgtg
gaggaaagcagtactgaagaaaacaaggagcagttggcatccgacctcagaggcctgtca
gtgagtgagggcgtgcgcaagctgcgagccatgccgcttagtctgacagataaaatgaag
atcagacgacttgcttttagtgacgtagctaaaagtacactcatcagtagaaatattcca
tgctacagtggtctcagcatgtacgttttgaggacttggcgtcactgcctgttcaactgc
ctccccatcctcagttccctccagccgtggcattcagccatgaagagactgagtggacgc
tttggaactggagtgctctcctacttcctgtttctccgaaccctcctgcgctttaacctc
ctactcttcatcatcaatggcctgttcgtggtcatgcctcaagccattgaccctcctatt
tatgaccctcatctccatactttcactggccttcagcttctcacaggcacgggctacctc
tctcagagtgtgatgttttacggctactacaccagcactaactcaatcactggccagatg
gtgtcatacagcataccagcagcctacctcttttccattgccatcaccttcttcgtcatc
tgcatcatcctggtgtccagcatgtccaagtcctttgggagaagttttcatgtcctcaag
tcaaatggggatctggcagtaaaagttttcagcacctgggactttaaactcagcaagaag
tcatctgtcagagttcagtctgagagaatcagcactcagctcaaagagcttctgtctgag
atgatcagtggagaagacgaaaagagctgcatgcagcgactctgcttcctcctagtgcat
ctggtggcgtgggctacatgtctagccagcatcttcatgggcgccatgggagtccactac
ctgtcagaggccaccattaaaccgggtcctgtcagagaaactgagctgctgctcttgtct
gcagtggtgtcaggcattaacctgttacttcctggcctcttcaacctaagtgcttggata
gagaaacacgactcaccctgtgtccgtgtctatgtctccatcttcaggaacctgttgttg
aagatcagtattgttggcgtgctgtgctaccgctggctgggaagaattgctgtggaacca
gaaagccgtgatttaaagtgttgggaaacctttgtggggcaagaactgtatcgcttgctt
ctgatggactttatcttcacagtgctttacacttttttgggagagttcctgtggaggctc
ttttctgaggaagtgttgaaaagggacaggaagccagtgtttgacattgctcgcaatgtg
ctggagctcatatatggacaaactcttacttggctcggggtactgtttgccccacttctt
cctgcagtccaaatcataaaattgcttgtgctgttttacatgaagaagagcagtctgatg
ctcaactgtcaggcctccagaaagccctggagggccagtcagatgacaacactattcatc
tctcttttgtgcttcccatcatttctcagtgctgccgtgtctgtcatgtatactatttgg
aagattaaaccctcagcagagtgtggccctttcaggaatctcaccacaatgtttcagcca
gagaagctgtcggcacaggagatgaagaactcccacccaatcctgtcttcgctcatttgg
gtgtataactctgtggtggagaacccattgtttttatttctcgcctgcggagtcttccta
atggtgatctactttcatactcaagttgttgatggccaaagcagaatcatcagtcggtta
gaaaagcaaattgaaaatgagggtaaggacaaaaagttccttattacccaattgcaagcc
atttgtgaagagaatagtctggtttcctcagataagttggcaagatatgatctcatcagc
gacaagcatcttagctttgaactcatctatgccaagatggttgccaatgttggcaagcta
caaggagaacaaaagtataagaaaaacctgttacagtag
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