Seriola dumerili (greater amberjack): 111227226 Help Entry 111227226         CDS       T05606                                  Symbol xab2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu03040   Spliceosome Brite KEGG Orthology (KO) [BR:sdu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111227226 (xab2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sdu03019]     111227226 (xab2)    03041 Spliceosome [BR:sdu03041]     111227226 (xab2) Messenger RNA biogenesis [BR:sdu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      111227226 (xab2) Spliceosome [BR:sdu03041]  Complex B   Other components    Prp19-related factors     111227226 (xab2)  Complex C     111227226 (xab2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_12 TPR_2 TPR_8 TPR_15 ARM_TT21_C TPR_16 ARM_TT21 TPR_MalT NRDE-2 SNAP Tcf25 TPR_1 DUF4515 Motif Other DBs NCBI-GeneID:  111227226 NCBI-ProteinID:  XP_022608380 UniProt:  A0A3B4UWD8 LinkDB All DBs Position Unknown AA seq 849 aa AA seqDB search MPSLNGKTDVVFEDDDLPYEEEIIRNPYSVKCWMRYIEFKQNGPKSTLNMIYERALKELP GSYKLWYSYLRERRKQVKGKCITETAYEEVNNCHERALVFMHKMPRIWLDYCQFLVSQCK ITRSRRTFDRALRALPVTQHPRIWPLYLRFVRNLPLPETAIRVYRRYLKLSPENAEEYID YLRSVGRLDEAALRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIR GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEES MIAAKMETTAEMGQDEDDDIDLELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK LYEGNPRQIINTYTEAVQTVDPMKATGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVN YKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDASEPVQNRVYKSLK VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGI ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEE YGLARHAMAVYERATQAVETEERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHAR DMCQRFADMESKLGEIDRARAIYSYCSQICDPRVTANFWQTWKEFEIRHGNEDTIREMLR IKRSVQATYNTQVNFMSSQMLKATTSATGTVSDLAPGQMGIDDMKMLEQKAQQLAAEAEQ DKPKPKEKILFVRSDTSRSELAELSKQANPDEIDIDDDDEDEDDDQGPEEVQLEQKSVPT AVFGGLKDD NT seq 2550 nt NT seq  +upstreamnt  +downstreamnt atgccatcgttaaacggaaaaactgatgttgtgtttgaggacgatgatctgccttatgaa gaggagatcatcaggaacccatactcagtcaagtgctggatgcgttacatcgaattcaaa cagaacggacccaaatccaccctgaacatgatatatgagcgggctcttaaagagttgcct ggcagctataaactgtggtacagttatctgagagagagacggaaacaagtcaaaggaaaa tgtatcactgaaacagcctatgaggaggtcaataattgccatgaaagggcactggtattc atgcacaagatgcctagaatatggctagattactgccagttccttgtgtctcaatgcaag atcacgagaagtcggcgaacatttgaccgtgcactcagagctcttcctgtcactcagcac ccacgcatctggcctctgtatctccgctttgttcgtaacctacccctgcctgagacagct atccgggtgtatcgcaggtaccttaagctttctccagagaatgcagaggaatacatagac tacttacggtctgttggccgcttggatgaagcagctttgagactagcagctgttgtcaat gatgaaagctttgtgtccaaagagggcaagtccaactatcaactgtggcatgagctctgt gacctgatctcccagaaccctgataaggtgacctctctgaatgtgggagccattatccga ggaggcctcactcgcttcacagaccaacttgggaaactttggtgctctttggctgactat tacatcaggagtggccactttgagaaagcccgcgatgtgtatgaggaggccatccttaca gtggtaacagtaagggatttcacacaagtgtttgacagttatgcccagtttgaggagagc atgattgctgccaagatggagaccactgctgagatggggcaggatgaagatgatgacata gacctggagctcagactggcccgctttgagcagctgatagcgcggcggcccctcctcttg aacagtgtactgctgagacagaaccctcataatgtccatgagtggcacaagcgggtaaag ttgtatgagggcaatccacggcagattatcaacacttatactgaagcagtacagactgtg gatccaatgaaggccacagggaagcctcactctctctgggtttcctttgcaaaattctat gaggaaaatgagcagctggatgatgccaggacaatatttgagaaggctaccaaggtgaac tataagcaggtagatgaccttgctgcagtgtggtgtgaatatggagagatggagcttcgc cacgagaactatgaacaggcgctgcgcatactgaggaaagctactgccatcccatccaag aaagcagagtactttgatgcatctgagccagtccagaacagagtgtacaagtctttgaag gtctggtctatgctggcagacttggaggagagtcttggcaccttccagtctacgaaagca gtgtatgaccgcattattgacctccgcatcgcaacgccacagatcattatcaattatgcc atgttccttgaagagcacaactactttgaagaaagcttcaaagcatatgagcgtggtatc gctctcttcaggtggcccaatgtgtatgacatctggaacacttacctcaccaagttcatt gatcgttatgggggcaagaagctggagagagcgagagatttatttgaacaagcgctggat ggctgccccgccaagtttgccaaaacaatttacctgttgtatgccaaattggaggaggag tatggattggcacgacacgccatggctgtctatgaaagagcaacacaggcagtagaaact gaggagagacatcacatgttcaatatctacatcaagagagcagctgaaatttatggagtt acctataccagagcaatttaccaaaaagctattgaggtccttcctgatgagcatgcgagg gatatgtgtcagcgatttgctgacatggagagtaaactgggtgagattgatcgggccaga gcaatctactcctactgctcccagatctgtgacccaagggtgacagctaatttctggcag acctggaaagaatttgagatccgccatggtaatgaggacaccattagagaaatgctgagg atcaaacgcagtgtccaggccacatacaacacccaggtcaactttatgtcctctcagatg ctgaaggccacaacaagtgccacaggcactgtgtcagatcttgctccaggccaaatggga attgatgacatgaagatgttggagcagaaagcacagcagcttgctgcagaagctgaacag gacaaacccaagcccaaagagaagattctctttgttaggagtgacacttctcgcagtgag ttggctgagctttccaaacaagccaatcctgatgagatcgacattgatgatgatgacgag gatgaagatgatgaccaaggaccggaggaggttcagcttgagcagaagagtgtccccaca gctgtctttggaggccttaaagatgactga

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