Seriola dumerili (greater amberjack): 111227265
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Entry
111227265 CDS
T05606
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111227265
03036 Chromosome and associated proteins [BR:
sdu03036
]
111227265
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111227265
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111227265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
UBA_7
UBA
RRM_1
Ago_hook
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
111227265
NCBI-ProteinID:
XP_022608421
LinkDB
All DBs
Position
Unknown
AA seq
1821 aa
AA seq
DB search
MLLYPHPPSLHFLLVPHHPPTSTVPDSAELDPTPPLPPINPSTVPSVLPSSGNGKRAPSG
GQPQTAQQPQTLLQQRYPPREVPPRFRQQEHKQLLKRGQPLPSGTLLLTTTGRPCSTEPA
AAAVAIHSSPSCSSSSTELPPQSGQGAQYDNPLWGHLPANRSTTSAASSTNLSGWDQLII
DQKDTEAWPSITLSQSQAPPGGCPLDTDPGRLTSSSSSTSSSCSTVSMATGANSQTGHFP
ANHLSSKANSGPSPANHTGTNMLSSQVAANRSWGSGPGPSHCPPQSSVGNEGKSDSPVGG
AGGRGWGSSSSSSTTNFNLNLNPNANPSAWPMLGHDGGGTGGGSSGGANTISPPQPTPNL
CNPPGPPSAQTSTCTGANTNSNSSGIGSAWGSIMTSDMSEAHPSPSTNVSFSSEPQNLKT
DGPNHTNKQEPPSPIRSLPGWGSASVGLGSMGQPPPGVPQVNGEDSSSVWGHSGDSKAPS
SKEASGWDSGWSHGGAGAGNSGGWGDQSGGDWGKQHTEEAQGGWDAPSSPPQDPQAGPWG
RAVSTAAASEGSSDSMEGHNQRRDRSSRDNPAPLLPAQDLDPRVLCNTGWGQTPVRQHTS
WDMDDTKRKNDVGTETWGSGPTTPSDAQGPSKTNIGPTQRTDSGSKNDVPGSQGASGWGG
SVAATNQPSSGWGEPPNNIKPPGGPGGWGNHPTGGPTTSVPKNGSQTWGEEKSSGWDDSH
IKTTSQGWGEQPKASHGWGNSGASKNAGDWGEPEESKKSPTNPAWEGEAGGWKEKPRGWG
MPASAPGISGPGGNGGWGEQVSQRPSGPPQGWGGKPQDGPSCSGGAGGIGSWGGSGSVKQ
GGSWGGSKQESSAEPTGWEEPSPPSIRRKMEIDDGTSAWGDPGSYNKAVNLWDRNNPGMS
QAKVTTGGNNPPGPNNNHPHSHNHPYHGPPAPLQNHSQNSQNPGPTSGPMDPVVQHQPGP
SHNRGPLIAQGWGDLPSSHTKSESSWGEPAPSPVSVDNGTSAWGKPSGSCGGWGDGNPDS
YGRGNPTMTTASCKPAPKPMQDGWGGGGEELSQWDAEEGDMWNSTASQESNSSCNSWGNA
SKKGPQKGKVPGKQEDAWMMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMSALLEKKT
ELDKRGMGIAGHDYNNGLINKPMSCPRPPLLSKDPSADPRLPFMDKQMQSGMFGGGGAAQ
ARTMQQPQPPPQPPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPI
NPQHMTLLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPIRQQEQQVARTINNMQQQIQQHQ
RQLAQALLMKQQQQQPPPSHSGLHPGGAKSTLDSFPGHPHAPGLPDLQTKEPQSSPNTYS
HYSLSGLNPNMNVNCMEVGGLSMKEPPQPQSRLSQWTHPNSIESLSGSSSPLEPSLGKHG
SNLGPPGKPPQLEDSYSPYNLMSSSESPTSPLVPPDSWGQGKSSSDKMANGTNINWPPEF
CPGVPWKGLQNIDPETDPNVTPGSVPSGPTINTNIQDVNRYLLRDRSGGKLSEMKSTWSP
GPISHSQASLSHELWKVPQGPRSSTTAPSRPPPGLTNTKPSSTWGGNSLGLAQGWSSSYT
SAGTTWSTDSSTRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSS
KDEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQSLGGTTSWQATPGTNQTRMGG
TGSGASHPIGHSPHWNNNNGSSSSSGLGAGGAKTGGELLWGGVQQYSSLWGPPSGEEGRV
MGSPTPINTLLPGDLLSGESM
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgtacccccaccctccatccctgcatttcttacttgtcccccaccatcctccc
acctccacagtgcccgactctgccgagctcgaccccacccctcctcttccccccatcaac
cccagtaccgtcccatctgtactcccaagcagtggcaatggcaagcgcgccccctccgga
ggtcagccgcagacagcacagcagccccagactctgctccagcagcgctacccacccaga
gaggtgccccctcgcttccgccagcaggagcacaagcagctgttgaagaggggccagcct
ctgccctctgggaccctgcttctcaccaccacaggacgtccctgctctactgaacctgca
gcagcagctgtagcgatacactcctctccctcctgctcctcttcctccacagaactgccc
ccacagagcggccagggagcccagtatgataatcccctctggggacacctgccagccaac
aggagtaccacaagtgctgcatcttccaccaatctcagtggttgggatcaactgatcatt
gaccagaaggatacagaggcttggccctctattaccctcagccagagccaggcccctcca
ggaggatgccctttggatactgaccctggtcgcttgaccagcagcagcagcagtactagt
agtagttgcagtacagtgagtatggccacgggggccaatagccagacaggccactttcct
gccaaccaccttagcagcaaggccaacagtgggcccagccctgccaatcatactggaacc
aacatgctctctagccaggttgcagccaatcgcagctggggctctgggcctggaccctcc
cattgcccccctcagtcctcggtggggaatgaaggaaagagtgacagtccagtgggggga
gcaggcggcaggggctggggctcttcttcatcatcctcaaccaccaactttaacttgaac
ctaaaccctaatgccaacccatctgcttggcccatgctggggcatgatgggggtggcaca
gggggaggcagctcagggggagccaacaccatttcacctcctcaacctacacccaacctc
tgtaatccacctggccccccatcagcccagaccagcacctgtaccggagccaacactaac
agcaactcctcggggattggcagcgcctggggtagtataatgacttctgacatgtcagaa
gcgcacccctccccgtccacgaatgtgtctttcagttcagaacctcagaaccttaaaact
gatggaccaaatcacactaataagcaggaacctcccagccccatccgcagcttgcctggc
tggggtagtgcatctgtaggcttgggttccatgggtcaacccccaccaggggtcccacag
gtcaatggagaagatagtagctcagtatggggtcacagtggagactctaaggcaccttca
tctaaggaggcatctggctgggattctggctggagccatggaggagctggagcaggaaac
tctggaggttggggtgaccagtctggtggagactgggggaaacagcacactgaagaggcc
cagggaggatgggatgccccaagctcccctccccaggatccacaggctggtccttggggc
agagctgtgagcacagctgctgccagtgaaggcagcagtgacagcatggaaggacataac
caacgcagagaccgctcatccagagataatccagctcctctgctgcctgcccaggatctg
gaccccagagtgctgtgtaacactggctggggacagacccccgttcgccagcacacctcc
tgggatatggatgatactaaacgtaagaatgatgtaggcactgaaacatggggctctggc
ccaaccacaccaagcgatgcccaggggccctccaaaacaaacattggccccactcagagg
actgactctgggagtaaaaatgatgtgcctggttctcagggagcttcaggttggggtgga
agcgtagcagctaccaaccagcccagctctggttggggagagccacccaacaacattaag
cccccaggtggccctggtggatgggggaaccatccaacaggaggccccaccaccagtgta
cccaagaatggtagtcaaacctggggagaagagaagtcgagtgggtgggacgattctcac
atcaagacaacatcccagggctggggagagcaacccaaagcatcccacggctggggcaat
agcggagcgagcaaaaacgcaggggactggggagaaccagaggagagcaaaaagagtccc
actaaccctgcctgggagggagaggcagggggctggaaggaaaaaccacgaggctgggga
atgcctgcttcagcacctggtatatctggacctggaggaaatggtggctggggagagcaa
gtttcccagcgtcccagtggcccacctcaagggtgggggggcaagcctcaggatgggccc
agttgtagtggtggagcagggggcataggctcttggggtggctcaggctcagtgaagcaa
ggtggaagttggggtggcagtaagcaggagtcctcagctgagcctacaggctgggaagag
ccctctccaccttcaatccgacgtaagatggagatagatgatggaacctcagcttggggt
gaccctggttcctacaacaaggcagtcaacctgtgggacaggaacaatccaggaatgtcc
caggctaaagttaccactggaggcaataatcccccaggccccaacaacaaccatccccac
tctcacaatcacccctatcatgggccgcctgcacctttacagaaccacagccaaaactcc
caaaacccagggcccaccagtgggcccatggatcctgttgtgcaacaccagccagggcca
tctcacaacaggggccccctgatagcccaaggttggggagacttacccagctcccacaca
aaatcagagagctcttggggggaacctgcaccctctccggtcagtgtggataatgggaca
tctgcctggggcaaaccaagtgggagctgtggaggctggggagacggtaacccggacagc
tatggcagaggcaacccgacgatgacaactgcatcctgcaaacctgcccccaaacctatg
caagacggatggggaggtggaggtgaggagctgagccagtgggatgctgaggagggagac
atgtggaacagcactgcctcccaagagagcaactcctcctgtaactcttggggcaatgca
tctaaaaagggcccacagaaggggaaggtcccagggaagcaggaagatgcctggatgatg
aatcgtctcatcaaacagctgacagacatgggcttccctagggatccagcagaggaggct
ctgaagagcaacaacatgaacttggaccaggccatgagtgccctgctggagaagaagaca
gagctggacaagcgggggatggggatagccggccacgactacaacaacgggctcatcaac
aagcccatgagctgccctcggcctccgcttctttccaaagacccctcagcagacccccgc
ttgcccttcatggataagcagatgcagagtggaatgtttggcggtggtggagcagcacaa
gcccggaccatgcagcagccgcagccgcctcctcagccgccagtgccgcctctcagctcc
tctcagcctagtctacgtgctcaagtgcctcagtttctctcccctcaggttcaagcacag
ctcttacagtttgcagcaaaaaacattggtctgaatcctgcacttttaacctcaccaata
aaccctcaacatatgacccttctgaatcaactttaccagctgcaactggcataccagcgt
ttacaaattcagcagcagatgttgcaggcgcagcgcaatgtttctggccccattcgacaa
caagagcagcaagttgcacgtacaatcaataacatgcagcagcagatccaacagcaccag
cgtcagctggcccaggccctgctgatgaagcagcagcaacagcagccacctccctcccac
tcgggcttgcatcctggtggggccaaatccaccctggattcatttccaggtcacccccat
gctccaggcctccctgacctgcagaccaaagagccgcagtcatctcctaacacctacagc
cactactctctctctggactgaatccaaacatgaatgtaaactgcatggaggtgggaggt
ctgtctatgaaggaacctcctcagccccaatcgcgcctatcacagtggacgcacccaaac
tccattgaaagcctctctggtagctcctctcctctagagcccagcctgggcaagcatggt
tccaatttgggcccccctggtaagccccctcagctggaggactcttacagtccctacaac
ctgatgtccagctcagagtctcctaccagccccctggtccccccagacagctggggacag
ggcaagagcagcagtgacaagatggccaatgggaccaatatcaactggccaccagagttc
tgccctggtgtgccctggaagggcctccagaatatcgaccctgagactgaccccaacgtg
acccccggcagtgtccctagtgggcccaccatcaacaccaacatccaagatgtcaaccgc
tacctgctgcgggacaggagtggaggtaaactgtcagagatgaaatctacttggtctcca
ggccccatttctcacagccaggcctctctgtcccacgagctgtggaaggtcccccagggc
ccccggagcagcaccacagccccttcccgccccccacctggcctcaccaacaccaagcct
tcctccacctgggggggcaactccctgggtctggcccagggctggagcagctcttacacc
tcagcaggtaccacatggagtacagacagctccaccagaaccagtagctggctggttctg
aggaacctcactccacagattgatggttcaactctgcgtacactgtgcatgcagcacggc
cccctcatcacattccacctcaacctgacacagggcaacgctgtggtgcgctacagctcc
aaggatgaagctgccaaggctcagaagtccctgcacatgtgtgtgctcgggaacaccacc
atcctggcagagtttgccggggaggaggaagtgaaccgcttctttgcacagggccagtcg
ctcggcggaacaaccagctggcaggccactccaggcaccaatcagacaaggatgggtgga
accgggtccggagcctctcatcccatcggtcactcaccccactggaacaacaacaatggc
agcagcagtagcagtggcctgggagcaggcggagcaaagacgggcggggagttgctttgg
ggtggcgtacagcagtattctagcctgtggggacccccgagtggagaggagggacgggtc
atggggagtcccaccccaatcaatacgctgctgcctggggacctgctgagtggggagtcc
atgtag
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integrated database retrieval system
