Seriola dumerili (greater amberjack): 111227364
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Entry
111227364 CDS
T05606
Symbol
sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111227364 (sox2)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111227364 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111227364
NCBI-ProteinID:
XP_022608570
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNTSGTGTNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPSQMQSMHRYDMSALQYNTMTSSQSYMNGSPTYSMSYSQQTTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEQTAQTRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
acgggcaacaccaacacgtccggcactggcaccaaccagaaaaacagtccggagcgggta
aagagacccatgaacgcgttcatggtgtggtcccgaggccagaggaggaagatggcccaa
gagaatcccaaaatgcacaactcggagataagcaagaggctgggcgcggagtggaaactt
ctgtcggagagcgagaagagacctttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctgatgaag
aaggacaagtacaccttgcccggcgggctgctggctccgggaggaaacgggatgggaact
ggggtcggtgtaggggtgggcgccgggctgggcggtggggtgaaccagcggatggacagc
tatgcggcgcacatgaacggctggaccaacgggggctacggcatgatgcaggaccagctg
agctaccagcaccctgggctgaacgcgcacaacccgagccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaacaccatgaccagctcccagagttacatgaacggc
tccccgacatactccatgtcctattcccagcaaaccacgccggggatgaccgccctgggc
tccatggggccctcctccgtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcgtcccaccgggccgccccgggctgccaaagcggagacctgagggacatgatc
agcatgtacctgcccggggcggaggtgagcgagcagaccgcccagaccaggctacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgccgttaaca
cacatgtaa
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