Seriola dumerili (greater amberjack): 111227411
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Entry
111227411 CDS
T05606
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111227411
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
111227411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
COLFI
PMP1_2
Motif
Other DBs
NCBI-GeneID:
111227411
NCBI-ProteinID:
XP_022608581
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MTNNPSTDDDDIMNLVTKDEEQDEYNDDKEREADEEEEDDDDDDDEYEEKVCHSPLVSNL
LPSSFRSSSQLSSSHGPGFAKLNRREGAGGWSPLSSDRYQWLEVDLGGRTQITAVATQGR
YGSSDWLTAYLLMFSDTGHNWKQYRQEDNIGAFPGNSNADSVVQHKLQHPVIARYVRLIP
LDWNPNGRIGLRLETYGCPYNSDVVNFDGHSSLLYRLRPRPRQVTRESISLKFKTLRNFG
TLLHAEGQSEHSLTLELEKGKLILVLRKGRSSSPDSRHLVSLGSLLDDQHWHQVAVEHHS
NHLNLTVDKSTLWVQIPPRFTHWDHDQMSVGAEHGLGSLRSVGSNRNFHGCLENLVYNGV
NLADLAKQRDQRVSVKGNVTFSCAEPIFVAMTFTSPQSFLWLLRVTEPSLMGMSVGLQFR
TWNKAGLLLTFDLPSQGGAVWLYLSKAMLHLQVHKPGRICRSVSSASALNDGQWHSVVLV
SRRGRLTIAVDGDEGATAHASPSFLITTGQLFFGGCPADGSSQECMNPFKAFQGCMRLLT
VDGQEMDLIKVQQRMIGNYSHLQIDMCGIIDRCSPNHCEHGGSCSQSWSTFHCNCSSTSY
SGATCHSSIYEQSCEAYKHKGNTSGYYYIDVDGSGPIRPQLIYCNMTEDKTWMVIQHNNT
ELTRVRPSPGKNQHSAHFEYASEEAQLAAIISQSERCEQELTYHCRKSRLLHTPDGSALS
WWVGGPGEGQVQTYWGGASPGSQQCACGQQESCVDLKHHCNCDADYTEWTNDTGLLTHKE
NLPVRSLVLGDVQRPGSESAYRVGPLRCHGDKNVWNAAFFDKETSYLHFPTFHGELSADI
SFLFKTTSSSGVFLENLGIKDFIRIELSSSTEVLFSFDVGNGPLEVGVKAGFPLNDNRWH
RIRAERNVKEASLRLDELPAATQEAPADGHIHLQLNSQLFIGGTASRQKGFRGCIRSLQL
NGVTLDLEERAKITPGVQAGCPGHCSSYGSLCQNQGRCVERSNSFSCNCGPSAYTGAFCD
REVSAILKSGTSITYTVKEQVINEPNRSYNALPSSLYSDMTLRAENISLSFRTSQSPALL
LYVGSYHREYLALLLNKHDKLEVRYRLDSSKDTEILRSKVRNLANGQLHAVTISRLADAV
SVQIDQNTKEDFNLTSDVEFNGIRSLVLGRVHDSGELDPDLARLTSLGFTGCLSAVLFNS
ISPLKAALLHPDTSPVVVTGPLVQSVCGSTSTNPYAAETTHHQSGQAGSVGTGQPLVNAI
RSDSALIGGVIAVVIFVTVSALAVMARFLYRRKGLCQSQEIKTVKPEDSPELPFSSQSSS
HNGPSESQKEYFI
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaacccttccactgatgatgatgacatcatgaatttggtgacaaaagatgaa
gaacaggatgaatataatgacgataaagaacgtgaagcggacgaggaagaagaggatgat
gatgatgatgatgatgaatatgaagaaaaggtgtgtcacagtccactggtgtcgaatctg
ctgccatcctccttcaggagctcctcacagctgtcgagcagccacgggccaggctttgct
aagctgaaccggagagaaggcgctggaggttggtctcctctgagttcagacaggtatcag
tggctggaggtcgacctgggtgggcggacacaaatcactgctgttgccacgcaaggtcgc
tatggcagctccgattggctgacggcctacctgctgatgttcagtgacacaggacacaac
tggaaacagtatcgacaggaggacaacataggggcctttccaggtaacagtaatgcagac
agtgtggttcagcacaagctccagcatccagtgattgctcgttatgtccgcctcatcccc
ctggactggaatcccaatggtcgcatcggactcagactggagacctatggatgtccttac
aactctgacgtagtgaacttcgatggccacagcagcctcctgtacaggctgagacccagg
ccgaggcaggtgaccagggaaagcatctctctgaaatttaaaaccctgaggaactttggg
acgctgcttcatgcagagggacagagcgagcacagcctcaccctggagctagagaaagga
aagcttatccttgtcctacgcaaaggcaggagttcttctcctgacagccggcatctcgtg
tctctgggcagcctgttagatgaccagcactggcaccaggtcgccgtggagcatcacagc
aatcacctcaacctcactgtggacaaaagcacgctgtgggtgcagattccaccaagattc
acccactgggaccacgaccagatgagtgtgggagcagagcacggcctcggctctctgagg
tcagtcgggtcgaacagaaatttccacggctgtttggaaaacctcgtttacaacggcgtg
aacttggcggacctcgccaaacagagagaccagcgggtctctgtgaagggcaatgtgacc
ttttcctgtgctgaacccatttttgttgccatgacgttcaccagcccccagagtttcctc
tggttgctaagggtgaccgaaccatcattaatgggcatgtcagtggggcttcagtttcga
acctggaacaaggcagggttgctactgacctttgatctcccaagccaagggggtgcggtc
tggctgtacctgagcaaagccatgctccatcttcaggtccacaagcctggcaggatatgt
cgttctgtgtcctcagcttcagctctgaatgacggtcagtggcactctgtggtgctggtc
tccagacgaggacgtctgaccatcgcagtggacggggacgaaggagccactgctcatgcc
agtccctcatttcttataaccacaggtcaacttttctttggtggttgccctgccgatggg
agcagccaggagtgcatgaaccctttcaaagctttccagggctgcatgcgtctgctgacc
gtggacggccaagagatggatttgatcaaggtgcagcagagaatgatcggaaactacagt
cacctgcagatcgacatgtgtggcatcatcgacaggtgttcgcccaatcactgtgaacat
ggaggcagctgcagtcaatcatggagcacctttcactgcaactgctccagcaccagctac
agtggagcaacctgtcacagctcgatatacgagcagtcctgtgaggcatacaagcacaaa
gggaacacgtcgggctattattacattgatgtggatggcagcggacccatcagaccacag
ctaatatactgcaacatgacagaggacaagacgtggatggtgattcagcacaataacaca
gaactgaccagagtccgaccatcgccgggaaagaatcagcactcggctcactttgaatac
gcatctgaagaggcgcagctggcggccatcatcagccaatcagagcgctgcgaacaggaa
ctgacctaccactgcaggaagtcacgtcttctccacacaccagatggctctgcactcagc
tggtgggtgggaggtccaggtgaaggacaggtgcaaacgtactggggcggggcttcaccg
ggcagccagcagtgtgcctgcggacaacaggagagctgtgtggacctcaaacaccactgc
aactgtgatgctgactacactgaatggactaatgacaccggcctgttgacccacaaagag
aacctccctgtcagatctctggtgctgggtgatgttcagaggcctggctcagagagcgcc
tacagggtaggacccctccgttgccatggagacaaaaatgtctggaacgctgcgtttttt
gacaaggagacatcgtacctccactttcccacattccacggagagctgagcgcagacatt
tccttcctctttaaaaccacctcatcctctggcgtcttcctggaaaacctgggcatcaaa
gacttcattcggatcgaactcagctcctctactgaggtcctcttctccttcgacgtgggt
aacggtccgttggaggtcggcgtgaaggccggcttcccgctgaacgacaacaggtggcat
cgcattcgagccgagcgcaacgttaaagaggcgtcgcttcgcctcgacgagctccctgcc
gccacgcaggaggctcctgctgacgggcacatccacctgcagctcaacagccagttattc
ataggaggcacggcctccaggcagaaaggctttcggggttgtattcgctccctgcagctg
aatggcgtcactctggacctggaggagagagccaagatcacccccggggttcaggcagga
tgtccaggccactgcagcagctacggctccctgtgccagaaccagggacgctgtgtggag
agatccaacagcttttcctgcaactgtggcccgtctgcttacactggagccttctgcgac
agagaggtgtcagccatcttaaagtcaggcacctccatcacctacaccgtcaaggagcag
gtgataaacgagccgaacaggagctacaacgccctgccctcctccctttactctgacatg
accctgagagcagaaaacatctccctgagcttcaggaccagccagagtcctgctctgctg
ctctacgtcggctcttaccacagagagtacctggctctgctgctcaacaagcatgacaag
ctggaggtacggtacagactggacagcagcaaagacacagaaatcctgaggagcaaagtg
aggaacctcgctaatggacagttacatgctgttactatcagcagactggcagacgctgtc
tctgtgcagatcgaccagaacaccaaagaggacttcaacctgacatctgatgtagaattc
aatggcatcaggtccctggttctcggcagagtgcacgactccggtgagctggatccagac
ctggctcggctcacctctctgggtttcacaggctgcctgtccgctgtcctctttaactcc
atcagccctctgaaagccgctctgctccacccagacaccagccctgtggttgtcaccggc
ccactggtccagtccgtttgtggctccacttcaaccaatccctatgcagcagaaaccaca
caccaccaatcaggccaggctggatcagtgggaacgggtcagcctttggtcaacgccatc
aggagtgactcggctctaattggaggtgtgatagcggtggtgatctttgtgaccgtgtct
gcattagccgtaatggcccgattcctctacaggaggaaagggttgtgtcagagccaggaa
ataaaaacagtgaaacctgaagacagccccgagctgccgttcagcagccagagcagctcg
cacaacggtccgagcgagagccagaaggaatattttatttag
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