Seriola dumerili (greater amberjack): 111227514
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Entry
111227514 CDS
T05606
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111227514 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111227514 (prpf38a)
Spliceosome [BR:
sdu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111227514 (prpf38a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
111227514
NCBI-ProteinID:
XP_022608759
UniProt:
A0A3B4T6B7
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAEMLDTR
ISALEEDLDEVESSEEEDEEEEKPERLQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRRGNE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaaccgttaaagatgcaaacagcatacacgggaccaatccgcagtatctg
gtggagaaaatcatccggacccgaatatacgagtctaaatattggaaggaggagtgtttc
ggactgactgctgagctggttgttgacaaagccatggagctgaagtttgttggaggagtt
tatggcgggaacatcaagcccactcccttcctctgcctcacgctgaagatgttgcagatt
cagccagagaaagacatcattgttgagttcataaagaatgaggatttcaaatacgttcgt
ttacttggagccatgtacatgagattaactggcactgcagtggattgttacaaatacctg
gagcctttgtacaacgactacagaaagatcaagagtcagaacaggaacggagagtttgag
ttgatgcatgttgacgagttcatcgacgagcttcttcacgcagagaggatgtgtgacatc
attctgccccggcttcagaagagacaagtcctggaggaggccgagatgttggacacacgt
atcagcgctctggaggaagacctggatgaagtggagagcagtgaagaagaagatgaggaa
gaggagaagccagagagactgcagacccctgaaccccacagacgcagttaccgtgacaac
gacagacctcgtcgctctccgtcacctcgttacagacggagccgctcacccagacggagg
agcagatctccaaagaggcgaagcccctcaccccggagagaccgccaccgcagcaagagc
ccccgcagacaccgcagtcggtccagagacagacgtcaccgctccaaatcccccggtcac
cacagaagccacaggcatcgcagccactcaaagtctccagagaggagttcaaaaaaaagt
cacaagaagagtcgaagaggaaacgagtga
DBGET
integrated database retrieval system
