Seriola dumerili (greater amberjack): 111227530
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Entry
111227530 CDS
T05606
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111227530
04020 Calcium signaling pathway
111227530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111227530
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111227530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
111227530
NCBI-ProteinID:
XP_022608786
LinkDB
All DBs
Position
Unknown
AA seq
2401 aa
AA seq
DB search
MARFEDELSSRYGGSCPAGPARGASRQPGPPGGQRVYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPALDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFRTDTGEQATEFPCGLEAPARTCSNGTACREYWIGPNFGITNFDNILFAVLTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSVDGAWYKRKHNNSVLKRT
KKSKNDLINAEEGEDHFTDISSVGSPFARASVKSKNENSSYFRRKEKRIRFTIRRLVKSQ
SFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLAEMSMKMYGLGPQNYF
HSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSL
LNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTG
EDWNAVMYHGIESQGGVHGGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEQEEAINKKLALQKAKEVKEVSPMSAANISITAFLTRSRGNAHSSSSSICSVNSLSYVC
TPVHQYLSKEQQKSVKMMSVWEQRANQLRRQNWASCEALYSELEPEERLRLSSALHLRPD
MKSHHDRPLLVEPCDRPLLGGHQHHHHKPCLPEEAETAADPPVIHQPRRHHRHRDRDRTR
MRDETNDNGDTGGRHHVHHSRSKDHDGSRGKEGKNERSRSREGGKKHHHQSSVDDSGGGG
IRPEREHRHHHSHRQSRGGNGTVNSGGREERRSRHKDGCSSHRDGDVNSRGDSGANGERR
RHRTHGSRGQSTAEGEEFNERERSQCHRDRCGESEGESLAISPQQGSGGANWPPDRPEDS
DNQRNVRRTGQSSIHIPPVTVTSPPGETILMQMNSIDCETMPVNEKTLEDLGQSGPKPIL
PYSSMFIFGQTNPVRRLCHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTNAPRNNVLKY
LDYAFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSSFMGSQQG
VTRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMF
IFAVIAVQLFKGKFFYCTDESKGLEKDCKGQFLDYDKDEVAAMPREWKKYEFHYDNVLWA
FLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVAL
IIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPENTQSFQYRMWKFVVSAPFE
YSIMIMIALNTVVLMMKFHGAPDFYEVMLKNLNIVFTTLFSLECILKIIAFGPLNYLKDA
WNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQ
SFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAINHHNNFRTFLQALMLLFRSATG
EAWHEIMLSCLSHRACDERSGTHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFE
YLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQMLLHMSPPLGLGKKCPPRVSY
KRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVWPNLS
QKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAQRQQQQQQQNSSGTQCKVGTLFKP
LLPLTHMQEKDMPMMLNSVEPPSMPQPQPKPHAKFQPQTRPSSNSLNNGGTLPDHDDNIK
SSSSWVMEKPREGPRAKTKRTMSRGPSEDTPDTAVIQESVEMQKMETSGSSTIPVSGTGL
ENQGRAVSMPRLSAELQRGHSRHSPGIHLASVPDASTMKRSASTVAPQRPQEVNLRDYTL
EKPSRERPHHHHHHHHHCHHRKDRDKDREKRQRSLDTPLGGPTPGSAGERVSDPAAPRER
AHDRGRSRERKHHHSSADKQRYYSCDRFCSREHCHTKSATASCAASPSEGQETSNKQGSG
WVKGSPVALSSSSSTPSRGRRQLPQTPLTPRPVVAYKTANSSPVHYVSSQAFLSPGRLSR
GLSEHNTLRHSSSCHFPCPITRISSEPFLGRGHGDAPGSPYGSLRDQLDVFQDVASVSPS
PRAGRSSWTALPCMIGALLPAPQQNLGLPNGYHFSFGGNTSPGSGVRAPRYYQEAEEDEW
C
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttgaagacgaactgtccagtcgctatggaggcagctgtcccgcgggcccg
gccagaggggccagccggcagccggggcctccggggggccagagagtgtacaaacagacg
atggcccagagagccaggaccatggccatttacaaccccatcccagtcaaacagaactgc
ctcaccgttaaccgctctctgttcatcttcagcgaggacaacatcatacggaaatatgcc
aaaaagatcaccgaatggcctccatttgagtacatgatcttggccaccatcatcgcaaac
tgcattgtgctggctttggaacaacaccttccggccttagacaaaacaccgatgtcagag
cgtttggacgacacagagccctactttattggaatattttgttttgaggctggcatcaag
atcatcgccctgggctttgcctttcacaaaggctcctacctacgtaatggctggaatgta
atggactttgtggtggtcctaacagggatcctggccacagtgggggctgatttcgacctg
agaacactgagggcagtgagagtcctgcggccgctcaaactggtctctggcattccaagt
cttcaggtggttttaaagtccattatgaaagccatggtacctctgctgcagattggcctc
ctgctcttctttgccatcctcatgtttgccatcattggccttgacttctacatgggcaag
ttccatcgtacctgcttcaggactgacacaggtgagcaggcaaccgagttcccctgtggc
ctggaggctccggcaaggacctgttcaaatggcactgcctgtagggagtactggattgga
cccaactttggcattaccaactttgacaacatcctctttgctgtcctcactgttttccag
tgcatcaccatggagggatgggtggacatcctctacaacgcgaatgatgcgtcaggaaac
acatggaactggctgtacttcatccccctcatcatcattggttccttcttcatgctcaac
ctggtgctaggcgtgctgtcaggggagtttgccaaggagagagaaagggtggagaagagg
caagagttcctgaagctccgcagacaacagcaaatagagagagagttaactggatacctg
gagtggatctgcaaagcagaggaggtgatgctggctgaggaagacaagaatgcagaggag
aaatccgtggatggagcttggtacaaaagaaaacacaacaactctgtgctgaaaaggaca
aagaagagtaagaatgacctcatcaacgcagaggaaggcgaggaccacttcactgacatc
tcatctgttgggtcgccgtttgcccgggccagcgtgaagagcaagaacgagaactcgtcc
tacttcaggaggaaagagaagaggatccgcttcaccatccgtcgtctggtcaagtcccag
agcttctactggactgtgttgtgtctggttggcctcaacacattgtgtgtagccatagta
cactatgaccagccggagtggctcacctatgccctatacctggctgagtttgtattcctg
ggcctgtttctggcagagatgtccatgaaaatgtacggcctgggacctcagaactacttc
cactcctcgttcaattgttttgactttggggtgattattggaagtatttttgaggtgatc
tgggctgccatcaaacctggggcctcatttggcattagtgtcttgcgagctctgagattg
ctcaggatcttcaaagtcaccaagtactggaactctctgaggaacctggtggtgtccctc
ctcaactccatgaagtccatcatcagtctcttattcctgctcttcctcttcatcgtggtc
ttcgctctgctgggcatgcagctgtttggtggccagtttaattttgaagatgaaacgccg
acaacaaactttgacacattcccagcagcgattctcacggtcttccagatcctaaccgga
gaagactggaacgcggtcatgtaccacgggattgagtcacaggggggcgttcatggggga
atgttctcctccatttacttcattgttctcactctttttggaaactacacactcctcaat
gtcttcttggccattgctgttgataaccttgcaaatgcccaggagctcactaaggatgaa
gaggagcaagaggaggccattaataagaaacttgctctccagaaggccaaggaggtaaag
gaggtcagccccatgtcagctgctaacatttccatcacagcttttctaacacgcagtcga
ggtaacgcgcattctagcagctcatccatctgcagcgttaactcactgagttatgtctgc
accccagtccatcaatacctgagtaaggagcagcagaagtcagtgaagatgatgtcagtt
tgggagcagagggccaatcagctgaggaggcaaaactgggcgagctgtgaggccctgtac
agcgagctggagcctgaagagcgtctccgcctgtcctcggccctccacctccggcccgat
atgaagagccaccacgaccggccgctgcttgttgagccctgtgacaggcctttgctgggc
ggccaccagcaccaccatcataagccctgtctgcccgaggaggctgagactgccgctgac
cctcctgtgatccaccagcctcgccgccaccaccgccacagagacagggaccggaccaga
atgagagacgagacaaacgataatggtgacactgggggtcgacaccacgtccatcacagt
cgctccaaagaccacgacggcagccgcggcaaagaggggaagaacgagagatcccgcagc
cgagagggaggcaagaagcatcaccatcagagctcagtggacgacagcggaggtggaggt
atcaggccagagagagaacatcgccatcatcactcacatcgccagtcccgagggggcaac
gggacagtgaacagtggagggagggaagagcgaagatcccgacacaaagatggatgtagt
tctcacagggacggggatgttaactccagaggagacagcggtgccaacggagagaggagg
agacatcggactcatggatccaggggccaatccaccgctgagggagaggagttcaatgag
agagagaggagccaatgtcacagggataggtgtggtgagtcagagggggagtccctagcc
atctccccccagcagggctctggaggggccaactggcctcctgaccgaccagaggactca
gacaaccagaggaacgtcaggcgaactggccaaagctccatccacatccctcctgtgact
gtcacctccccgcctggagaaaccatcctcatgcaaatgaacagtattgactgtgagaca
atgcccgttaatgagaagactctggaggatctaggtcaaagcggacccaaacccatcctg
ccttacagctccatgttcatctttggacagacaaacccggtgaggcggttgtgtcactac
attgtgactctgcgttattttgaaatgtccatcctggttgtcattgctatgagcagtatc
gctttggcagcagaggaccctgtctggacgaatgccccccgcaacaatgtgctcaaatat
ctggactacgccttcactggtgttttcacttttgaaatggtgatcaagatggtggacctg
ggcctgttgcttcatcctggatcctacttcagagacttgtggaacattctggacttcata
gtagtcagtggggcgctggtggcttttgcattctcgagcttcatgggatcgcaacaaggt
gtgaccagggggaccaaaggcaaagacatcagcactatcaagtcactgagggttctccga
gtgctcaggcctctcaagaccatcaaacgtctgccaaaactcaaggcagtgtttgactgt
gtggtcaactctctgaagaacgtgctgaacatcctcatcgtttacatgctcttcatgttc
atctttgccgtcatcgcagttcagctcttcaaaggaaaattcttctactgcacagatgag
tccaagggcctggagaaagactgcaaaggacagttcttggactacgacaaagatgaggta
gctgccatgcccagagagtggaaaaaatatgagttccattatgacaatgtgctgtgggcc
ttcttgaccctcttcactgtctccactggagagggatggccaactgtactgaagcactct
gtggatgccacctttgaagaccagggtcccagtccaggctaccggatagaaatgtccatc
ttctatgtggtctactttgtggtcttccctttcttctttgtcaatatcttcgtcgctctg
atcatcattaccttccaggagcagggagacaaggccctgtctgagtgcagcttggagaag
aacgagagggcttgcattgactttgcaattaatgccaaacctttgacacgctacatgcca
gagaacacgcagtccttccagtacaggatgtggaagtttgtggtctcagctccatttgaa
tactccatcatgatcatgatcgctctcaacactgtggtactcatgatgaagttccatgga
gctccagacttctatgaagtaatgctgaagaacctcaacatcgtcttcaccactctcttc
tctctggagtgcatcctcaagatcattgcgtttggtccactgaactacctgaaggacgcc
tggaatgtgtttgactttgtgacagtgttgggcagcatcactgacatcctggtgactgaa
atcaatactacggacaggctgctgaacctgagcttcttaaggctgttcagagcagctcgc
ctcatcaagctgctgaggcagggctacaccatccgcatcctgctgtggaccttcgtccag
tccttcaaggccctgccttatgtttgcctgctgattgcgatgctgttcttcatttatgcc
atcattgggatgcaggtgtttggcaacatcgagctgaatgaagacacagctatcaatcac
cacaacaacttccgcacattcctccaggctctcatgctgctgttcaggagtgcaactggt
gaggcctggcacgagatcatgttgtcatgtttgagccaccgagcctgtgatgaacgctca
gggacccatgggaaagagtgtggcagtgattttgcctacttctactttgtctcctttatc
ttcctctgctccttcctgatgctgaacctatttgtggctgtcatcatggataactttgag
tacctaaccagagactcctccatcctgggaccccatcaccttgatgagttcatccgggtc
tgggcagagtacgacccggctgcgtgtggccgtatcaagtacctcgatatgtatcagatg
ctgctccacatgtccccacccttaggtttgggaaagaaatgtccgccaagagtctcctac
aagcgtctggtcaaaatgaacatgcccatcgctgacgacaacaccgtccacttcacgtcc
accctgatggccctgattcgcaccgccctggagatcaaactggcctcgggtatggtagct
cagcgactgtctgatgctgagttaaagaaggagttgtccacagtgtggcccaacctctca
cagaagaccatggacctgctggtgacaccacataaacccaatgaactgacagtagggaag
gtttatgcagccctcatgatcttcgactactacaagcagaatcgagcacagaggcagcag
cagcagcagcagcagaactcatctggaacccagtgcaaggtcgggactctgtttaagcca
ttgctgcctctgactcacatgcaggagaaagacatgcctatgatgttaaacagtgtggag
cctcccagcatgcctcagcctcagcccaaaccccatgccaagttccagccacagaccaga
cctagctccaactcgctcaacaacggaggcacgctgccagatcatgatgacaacatcaag
tcatcatcttcctgggtaatggagaaacccagggaagggccccgggctaagactaaaaga
accatgtcaaggggcccgtcagaagacacaccagacactgccgtcattcaggagtcggtg
gagatgcagaagatggagaccagtggcagcagtacaatcccagtctctggcacaggtctg
gagaaccagggcagagctgtttctatgcctcgactcagcgctgagctgcagcggggccac
tcacgccactctccagggatccatctcgcttctgtccctgatgccagcaccatgaagcgc
tcagcctccactgtggctccacagcgaccccaggaggtcaacctgagggactacaccctg
gagaaacccagccgggagcgaccccaccaccatcaccaccaccaccaccactgccaccac
cgtaaagacagagataaagacagagagaagaggcagaggtcattggatacacctctaggt
ggaccaactccaggctctgctggagagcgagtgtctgacccagctgcccccagagagcga
gcccacgaccgcggacgttcccgagagaggaaacaccaccactcctcagcggacaagcag
cgctactactcctgcgaccgtttctgcagccgggaacactgccacaccaaatctgccacc
gcgagctgtgccgcctcacccagcgaggggcaggaaaccagcaacaagcagggcagtggt
tgggttaaaggcagcccagtggcactgagttccagttctagcacgccgagccgtggacgt
cggcagctcccccagacccccctcaccccacggccagtggtggcttacaagactgccaat
tcctcccctgtacactatgtgtccagccaggcctttctgagtcccgggcggctgagccgc
ggcctgtcggagcacaataccctccggcacagcagctcctgccacttcccctgccccatc
actcgtatcagctctgagcccttcctgggccggggccacggcgacgccccgggcagcccc
tacggcagcctccgggaccagctggatgtcttccaggatgtggcgtcagtgtcgcctagc
ccccgtgccggacgctcatcttggaccgcactgccttgcatgataggagccctgcttccg
gctccacagcagaaccttgggttgcccaatgggtaccacttcagcttcgggggcaacacc
agcccaggctctggcgtcagggcacccaggtattaccaggaggcagaggaggacgaatgg
tgctag
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