Seriola dumerili (greater amberjack): 111227710
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Entry
111227710 CDS
T05606
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111227710 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111227710 (cnot10)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111227710 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_14
TPR_16
ANAPC3
TPR_8
TPR_7
ARM_TT21
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
111227710
NCBI-ProteinID:
XP_022609086
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MAENAEQNEAKHDSSSSPGMTDQEKEMAASAYEAFSAGKYDESLKNLETLQELNKEDYKI
AMNKAVVEFYKSGQTTTGTLKQTLMAMKNQVHTSAEDVDGLDDVENSLLYYNQAIIHYHM
RQYSEAISIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLDKLSVQGS
NKNGKGENNSSNKDGANQKAEFTAMIEAAKSKMHQYKVRAYIQMKSSKACKREIKSVMNT
AGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPIKTGECVRCMFWNNLGCIHFA
MGKHNLGIFYFKKALQENDHTCAQLGDGNNGQSKKFTGIPMCALLANKRYELLYNCGIQL
LHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCISANKGGSEQESKGIPCKKGIVQSIV
GQGYHRKIVLASQSTQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQDTKTENGS
KSFSQSGSTESGSENSDACSGKGQEADKFLSAAPSSPLRKQEVENLRCSILACSAYVALA
LGDNLMALNHAEKLLHQTKVSGSLKFLGHLYAAEALISLDRISDAIAHLNPENVSDVSMG
VLSSEQDQGSDKGDEPVESSGKQTPLCYPSSVTSARAMMLFNLGSAYCLRSEYDKARKCL
HQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPTAVQRVSPDSRKKPVQ
PFQLPSSFTQVQRK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacgcagaacaaaacgaggcgaagcatgacagctcatcgtcgcctggaatg
acagaccaagagaaggaaatggcagcgagtgcatatgaagcattttcggctgggaagtac
gacgagtctctcaaaaacctagaaacactgcaggagctcaacaaagaggactacaagatc
gccatgaacaaagctgtggtggagttttataaaagtggtcagaccaccacagggactctg
aagcagacactcatggcaatgaagaaccaggtgcacacatcagcagaggacgtcgatggg
ctggacgacgtcgagaacagtttgctgtactataatcaagccatcatccactatcacatg
cgacagtactctgaagccatctccataggagagaagctgtaccagtttctggaaccattt
gaagagaagtttgctcaggctgtgtgctttctgctggtggatctgtacctgctcaccttc
cagccagagaaggccctccacctgctggctgtgctggataaactctctgtgcaaggaagc
aacaagaacggcaaaggagagaacaacagctcaaacaaagacggagcaaaccagaaagca
gagttcacagccatgatcgaggcggccaagtcaaagatgcaccagtacaaagtgagagcc
tacatccagatgaaatcctccaaggcctgtaaaagggagatcaaatcagtgatgaacaca
gcagggaactctgcgccctcgctcttcctcaagagtaactttgagtacctgagaggaaac
tacaggaaagcggtgaagctgctgaacagctccaacatcgcagagcatcctggacccatc
aagacaggtgaatgtgttcggtgtatgttctggaacaatctgggctgcattcactttgca
atggggaaacataacctgggcattttctacttcaagaaggcgctacaggagaacgaccac
acctgcgcacagctgggagacggaaacaatggccaatctaagaagttcacaggtatcccc
atgtgtgctctgctagccaacaagcgctacgagctgctgtataactgtggtatccagctg
ctgcacatcggaaggcctctggcagcgttcgagtgtctgatggaggccgtgcaggtttat
cactccaacccccgactgtggttacggctcgcagagtgctgcatctctgccaacaaaggg
ggctcggagcaggagagcaaaggtataccttgtaaaaaaggtatagttcagtctattgtc
gggcagggctaccatcgcaagatcgtcctggcttctcagtcgacccagaacaccatctac
agtgagggccagtcagcagctatcccagtagccagtatggagtttgcagccatctgcctg
aggaacgctctgctgctgctgcctgaacaccagcaggacaccaagacagagaacggctcc
aagagcttcagccaatcaggaagcacagagagcggcagcgagaacagtgacgcctgcagt
gggaaaggtcaggaggctgataagttcctgtctgcagctccatcgtcccccctcaggaaa
caggaggtggaaaatctcaggtgctccatcctggcttgtagtgcctacgtggcgttagca
ctgggagacaacctgatggctctgaaccacgccgagaagctgctccatcaaaccaaggtg
tctggatccctcaagttcctgggtcacctctacgctgctgaagccctcatctcattggac
aggatctctgacgctatcgctcacctcaacccagagaatgtgagcgacgtgtcgatggga
gttctgagcagcgaacaggaccaagggtctgacaaaggagacgagcctgtcgagtcctca
gggaagcagactcccctctgttaccccagcagtgtgacatcagctcgggccatgatgctc
ttcaacctgggcagcgcctactgcttgaggagcgagtacgacaaggcccgcaagtgtctg
catcaggctgcgtcgatggtgaacactaaggagattccacctgaagctatcctgctggga
gtctacttagagctacagaacggtaacacccagctcgccttgcagatcatcaaacgaaac
cagctgctgcccacagcggtccagagggtctcaccagactcccgtaagaaacccgtccag
cccttccagctgccctcatccttcacacaagttcagcgcaaatga
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