Seriola dumerili (greater amberjack): 111227721
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Entry
111227721 CDS
T05606
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdu03009
]
111227721 (dcaf13)
04121 Ubiquitin system [BR:
sdu04121
]
111227721 (dcaf13)
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
90S particles
Other 90S particles
111227721 (dcaf13)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111227721 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Sof1
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR75_1st
ASA1
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
TRM82_WD
ANAPC4_WD40
eIF2A
MIOS_WD40
KNTC1_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Beta-prop_SCAP
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
111227721
NCBI-ProteinID:
XP_022609123
UniProt:
A0A3B4U1W7
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKLLSRNPDDYVRETKLDIQRVPRNYDPTLHPFEVSREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHTKSLSTLFSGSCDGEVKVWDLTKHECVRTLQAHEGFVRGMVVRYC
GTSFFTVGDDKTIKQWKMEAPGYGEEEEPLNTILGKTVFTGLDHHQKEGVFATCGQQVDI
WDEQRSSPVRSFTWGVDSFSSVRFNPVETELLASCASDRSIVLYDMRESAPLKKVIMTMR
SNTLCWNPMEAYYFTCSNEDYNLYTYDMRHLDRPITVHMDHVSAVLDLDYSPTGKEFVSA
SFDKTIRIFPKDGGHSREVYHTKRMQHVICIKWSADNKYILSGSDEMNIRLWKANAAEKL
GVLSPREREATNYSQKLKEKFQHHPQIRRIAHHRHLPKNIYHQTKELRIMKEARRRKERN
VRKHSRPGAVPVVSEKEKHIVTVLK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaactcctctcgaggaacccggatgactatgtccgggaaacaaagctagat
attcagcgtgtccctagaaactatgacccaactctgcatccgtttgaggtgagcagagag
tacacccgggctctaaatgccactaagctggagagggtgtttgccaagcctttcctggcc
tcactggatggacacagggatggtgtaaactgcatggccaagcacaccaagagcctatcc
accttgttttccggttcatgtgatggagaggtgaaagtgtgggatctgaccaaacacgaa
tgtgtccgcacgctccaagcacatgaagggtttgttcggggaatggttgtccgctattgt
ggaacttctttttttacggttggtgatgacaaaacaatcaagcagtggaaaatggaggca
ccaggttacggagaggaagaagagccactcaacactattctaggcaagactgtgttcaca
ggactggaccatcatcagaaggagggtgtgtttgcaacatgtggccagcaggtggacatc
tgggacgagcagaggagtagcccagtccgttctttcacctggggcgtagacagcttcagc
tctgtccgcttcaaccctgtggagactgaacttctcgcaagctgtgcctctgacagaagt
atagtgctgtatgacatgagagaatctgcaccactcaaaaaggttatcatgacaatgagg
agcaacacattatgctggaaccctatggaagcatattacttcacatgctcaaatgaggac
tacaacctctacacatacgacatgaggcatctggaccggccaatcacagtgcacatggac
catgtctctgcagtactggaccttgactactctcccactggcaaagagtttgtatctgcc
agttttgacaagaccatccgcatcttccccaaggacggcggccacagcagggaagtctac
cacaccaaacgcatgcagcatgtcatctgcattaagtggtcagcagacaacaagtacatc
ctgagcggctccgacgaaatgaacatccgactgtggaaagccaacgcagctgagaaacta
ggagtgctcagccccagagagagggaggctaccaactacagtcagaagctgaaggagaag
ttccagcaccacccgcagatccgacgcatcgctcatcaccgacacctacccaagaacatc
taccaccagaccaaagagctgaggattatgaaggaggctcgccgtaggaaggagaggaat
gtccgcaagcacagcagaccaggagctgttcctgtggtgtctgagaaggagaagcatatt
gtcactgtgttgaaataa
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