Seriola dumerili (greater amberjack): 111227903
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Entry
111227903 CDS
T05606
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111227903 (wdtc1)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111227903 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
TPR_19
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
TPR_2
ANAPC3
Beta-prop_EIPR1
TPR_1
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
TPR_16
TPR_17
TPR_6
TPR_9
Barstar
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
111227903
NCBI-ProteinID:
XP_022609365
UniProt:
A0A3B4UZW4
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MFCGEAMTAVNITRDILHRQIRDKKASGFQRFYHVTDPFIKRLGLEAELQGHTGCVNCLE
WNERGDLLASGSDDQHAIIWDPFRHKKLTTMHTGHAANIFSVKFLPHSGDRILVTGAADT
KVHVHDLTVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEFCGQLVEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIHNYRKSMSQGTSAAVHT
FCERQKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQRPYTFLLPKKCQSSTGDVQNGKTTNGVSNGIHLPTSHIRFAGSKMRSSSTELP
PHLEKIKQQANDAFAQQQWTQAIQLYSLGIHQASCNAMLYGNRAAAYMKRKWDGDHYDAL
RDCLKALTLNPGHLKAHFRLARCLFELKYVSEALECLDDFKGKFPEQAHSSACDALDKDI
KAALFSKTESAEDKKANSSIRFHSFSRKESIPEDELVLRERSFDYKHRYCGHCNTTTDIK
EANFFGSKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGID
PVVRLWNPRPETESENGRVVEDMDGAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPDG
SDDEDSSEGQVQCRPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtggtgaggccatgactgctgtcaacatcaccagagatatcctgcacaggcag
atcagggacaagaaagcgtcaggcttccaaaggttctatcatgtgaccgaccccttcatc
aagagacttggtctggaggctgagcttcagggccatactggctgtgtgaactgtttggag
tggaatgaacgaggagacctactggcctcaggttcagatgatcaacatgccatcatctgg
gatccattcagacacaagaagcttacaactatgcacacaggtcatgcagcaaatatattc
tctgtaaagttcctccctcactccggggacagaattttggtaacaggtgcagccgacacc
aaggtccatgtgcacgacctgaccgtgaaggaaaccatccatatgttttctgatcatacc
aacagagtcaaacgtattgccacagcacccatgtggcccaacaccttctggagtgctgcg
gaggatggtatcatcagacagtatgacttgcgggagagcagtaaacgctctgaggtgctg
attgacctgacagagttctgtgggcagctggttgaagccaagtgtctggctgtcaaccca
cgggacaacaactacttggcagtgggagccaatggtccctttgtacgcctctatgacatc
aggatgattcacaactacaggaaatctatgagtcagggcacatcggcagctgtgcacaca
ttctgtgaaaggcagaagccgatcccagacggagctgggcagtattatgttgcagggcac
ctgccagtgaaactcccagactacaataaccgcctaagggtcctggtggccacctatgtc
acctttagtccagatggcacagagctgcttgttaacatgggtggggaacaggtgtatctg
tttgacttgacatttaaacagaggccatacaccttcttgcttccaaaaaagtgccagtca
tcaacaggagatgtacagaatggaaaaacaaccaatggcgtctccaatggaattcactta
ccaaccagccatattcgctttgccggaagcaagatgcgctccagttctactgagctccct
cctcatttggagaagataaagcaacaagctaatgatgcatttgcacagcagcagtggaca
caggccatccagctgtacagtttaggcattcatcaggccagctgcaatgccatgctgtat
gggaaccgggctgcagcctacatgaaacgcaagtgggacggagaccattatgatgccctc
agggactgtctgaaggctctgactttaaaccctggacatctgaaagcacatttcagactg
gcacggtgtctgtttgagctgaaatacgtgtctgaggctctggagtgtttggatgatttc
aaaggaaagtttccggagcaggctcacagtagtgcctgtgacgccttagataaagacatc
aaggctgctctcttctccaagacagaatcagctgaagataagaaggccaatagctccatt
cgattccactcattcagtcggaaagagtcgatcccagaagatgagttggtgctgagagag
cgcagctttgactacaagcacagatactgtggtcactgcaacaccaccaccgatatcaaa
gaggccaacttctttggaagcaaagggcagtacattgtcagtggctcagatgacggctcc
ttctttatctgggaaaaggagacaactaatctggtgaggatcctgcagggggatgagtcc
atagtcaattgcctgcagccccaccccagctactgcttcctggctacaagcggtattgac
cctgtagttcgattatggaaccccagaccagagacggagagtgagaatgggcgtgtggtg
gaggacatggatggtgctgctcaggcgaaccagcggcgtatgaatgccgatccactggag
gttatgctgctcaacatgggctatcgcatcacaggcctgcgtggcgttggcccagatggc
tcagatgatgaagacagctcagaaggacaagttcagtgtcggccaagctaa
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