Seriola dumerili (greater amberjack): 111227919
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Entry
111227919 CDS
T05606
Symbol
cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sdu03037
]
111227919 (cthrc1)
Cilium and associated proteins [BR:
sdu03037
]
Other cilia and associated proteins
Stereociliary proteins
111227919 (cthrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
111227919
NCBI-ProteinID:
XP_022609390
LinkDB
All DBs
Position
Unknown
AA seq
229 aa
AA seq
DB search
MSPLVARLLLLVCLALPLYGVEKVRNRGYRKDPDADKFGSCMQGPSGTPGRDGNPGANGI
PGTPGIPGRDGLKGEKGECISEIFEEPWRPNYKQCAWNSLNYGIDLGKVADCTFTKLRSD
SALRVLFSGSLRLKCKNACCQRWYFTFNGAECTGPLPIESIIYLDQGSPELNSTINIHRT
SSVEGLCEGVKAGLVDVAVWVGTCADYPRGDASTGWNSVSRIIIEELPK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccctcgttgcccgcctgctgcttcttgtctgcctggctttacctctgtatggc
gtggaaaaggtgagaaatagaggataccgaaaggatcctgacgctgacaagtttggcagc
tgcatgcaggggccatccggcacccctggcagagacggtaaccctggggccaatggcatt
ccggggacgccgggcatccctggccgtgacgggctcaaaggtgagaaaggcgagtgcatc
agcgagatcttcgaggagccctggaggcctaactacaagcagtgcgcctggaactctctg
aattatgggatcgacctggggaaagtagctgactgtacgttcaccaagctgcgctcagac
agcgccctcagagtcctcttcagtggttccctcagactgaagtgtaagaacgcatgctgc
cagaggtggtacttcaccttcaacggagcagagtgtacaggacccctccccattgagtca
atcatctacttagaccagggaagcccagagctcaactcaaccatcaacatccacagaaca
tcctcagttgaaggcctgtgtgagggcgtgaaagcagggctggtggatgtggccgtgtgg
gtggggacgtgcgccgactatcccagaggtgacgcgtctacaggctggaattcagtatcc
aggattatcattgaggaactgcctaaataa
DBGET
integrated database retrieval system
