Seriola dumerili (greater amberjack): 111228118
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Entry
111228118 CDS
T05606
Symbol
ftsj3
Name
(RefSeq) pre-rRNA processing protein FTSJ3
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdu03009
]
111228118 (ftsj3)
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111228118 (ftsj3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
tRNA_bind_3
MDH
Motif
Other DBs
NCBI-GeneID:
111228118
NCBI-ProteinID:
XP_022609680
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MGKKLKVGKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFTFLQKARALVDLCAAPGGWLQ
VASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAP
NVGANWQHDAFSQAHLTLMALKLACEFLTKGGTFVTKVFRSKDYQPLLWIFQQFFKKVQA
TKPQASRNESAEIFVICQGFVAPDKIDGKFFDPKHAFKEVEVQAKTVRELIPVKKPKAEG
YTDGDLTLYHSFTVTAFLKADNAVDFLGKASEITFDNPDLESHSATSLEIKECCRDIKVL
GRKELRLLLNWRSKLRRYLARKLKQEAKQLDQQINLSSDEDGSNSEEEPDKKKVEGEGEE
EVDTDEEEEMERKLAEMKAEEVADLKRKKRKLLKERRKQRERVELKMDLPGISIADGNDS
SLFSLTTVKKQKALADISKGDMQAADTLLDEEDDLHLSEEEDDDADKMSLASDLDEEEME
EVEHRQKALEKKAPKKKVQFAEEEEEDEGQESGLLVELEGKDEKKERETSLWFSKGIFSE
IDLEGDAESELQQTEWLQSKQTGKGKKRKAEEEEEEVGETAQPEEEKAGPSQEAEEESDS
DSDDSSDDEKEITRMKQARGAAGMSGEADADDFQVVPVESTSKKARILDAEGLALGCQIA
TSKKRARDLVDSSFHRFANSDEAWEVPEWFLDDERKHRKKPVPVTKEMVEEYKQKWKEID
SRPIKRVAEAKARKKRRMLKKMEQAKKKAEAVVNTVDISEREKMAQLKSIYKKAGVGKEK
REVTYVVSKKGAGKKVRRPPGVKGVFKVVDSRMKKDMRGMQRKDQHAKGGKGKGGKGKGR
PSKGGKGGVKGGKGRKGK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaactcaaagtcggaaagacccgaaaagataaattctaccacctggctaaa
gaaacaggctatcgctctcgttcctccttcaaactcatccagctcaaccgtaaatttacg
tttctgcagaaagccagagctctggtcgacttatgtgctgctccgggtggatggttacag
gtagcgtccaagtttatgccagtttcaagtctcattattggtgttgacctggttcccatc
aagcccatccccaatgtggtgacgctgcaagaagacatcaccactgagaaatgcagacag
gctttacgaaaggagctgcagacctggaaggttgatgtggtgttaaatgatggagctcca
aatgtgggagccaactggcaacatgatgccttctcacaagctcatctgaccctcatggct
ctgaaactggcttgtgagtttctgaccaaaggtggcacattcgtcacaaaggtcttccgc
tccaaagactaccagccactgctctggatcttccagcagttcttcaagaaggtgcaggcc
accaagccgcaagcgtctaggaacgagtccgccgagatctttgtcatctgtcagggcttt
gttgccccggataaaatcgacggtaaattctttgaccccaagcatgcgttcaaagaggtg
gaggtgcaggccaaaactgtgagggagctgattcctgtcaagaagccaaaggcggaggga
tacacagacggtgatttgacgctctaccacagtttcacagtgacagcctttctcaaagcc
gacaacgcagtggacttcctgggtaaagccagcgagatcaccttcgacaacccagacctg
gagtctcactcagccaccagtcttgagataaaggagtgttgtcgggacatcaaagtcttg
ggccgtaaagaactccgcctgctgctgaactggaggtccaagctgaggagatacctggcc
aggaaactgaagcaggaggccaaacagcttgaccagcagatcaacttaagttctgatgaa
gatgggagtaattcagaggaagagccagacaagaagaaagtagaaggagagggggaggag
gaagtggacactgacgaggaggaagaaatggagaggaaactggcagagatgaaagctgag
gaggtggctgacctgaaacggaagaagaggaagctgctgaaggagcggaggaagcagagg
gagagggtggagctgaagatggacctgccgggcatctccatcgctgacggcaacgactca
tccttgttttccctcaccaccgtcaagaagcaaaaggcgctggctgatatatccaagggg
gacatgcaggcagcagacactctgttagatgaagaggacgaccttcacctgtctgaggaa
gaggatgacgatgcagataaaatgtccctggcctctgatttagatgaagaggagatggaa
gaggtggagcacagacagaaagcgctggagaagaaagcgccaaagaagaaagtacagttc
gccgaggaagaggaggaggatgaagggcaggagagtggtttgctggtggagctggaggga
aaggacgagaagaaagaacgagagaccagcctgtggttcagcaagggcatcttctctgag
atcgacctggaaggagacgcagagagcgagctccagcagacagagtggctccagagcaaa
cagacaggaaaaggcaaaaagaggaaagctgaggaggaagaggaggaagtgggggaaact
gctcagccagaggaggaaaaggcaggaccttcacaggaagctgaggaggagagtgacagc
gactcagatgacagcagcgacgatgagaaggagatcaccaggatgaagcaggccaggggg
gctgctgggatgtcaggagaagccgatgccgacgacttccaggttgttcctgtagaaagc
accagtaagaaagccaggatcctagatgcagaaggcctggccctcggctgtcagattgct
acgtctaagaagagagccagggacctggtggacagctcctttcataggtttgcaaactcc
gacgaggcgtgggaggttcctgagtggttcctggacgatgaacgcaaacaccggaagaag
ccagtgccagtcaccaaagagatggtggaggagtacaaacagaaatggaaggagatcgat
tcccgacctatcaaacgagttgctgaggccaaggccaggaagaagaggaggatgctgaaa
aagatggagcaggctaagaagaaagcggaggcagttgtcaatacagtggacatctctgaa
agggagaagatggctcagctaaagagtatctacaagaaagcaggggttggaaaggagaag
agagaagtaacatacgttgtgagcaaaaagggagccggcaagaaggtgagacggccgcct
ggtgtcaagggagtcttcaaagtggtggacagtcgcatgaagaaagacatgcggggaatg
cagaggaaagaccaacatgctaaaggaggcaaaggaaaaggtggcaaaggcaaaggaagg
ccgtcaaagggtggcaaaggaggagtgaagggtggtaaagggcgaaaaggaaaataa
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