Seriola dumerili (greater amberjack): 111228178 Help Entry 111228178         CDS       T05606                                  Symbol col22a1 Name (RefSeq) collagen alpha-1(XXII) chain   KO K16630   collagen type XXII alpha Organism sdu  Seriola dumerili (greater amberjack) SSDB OrthologParalogGFIT Motif Pfam:  Collagen VWA VWA_2 Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  111228178 NCBI-ProteinID:  XP_022609702 LinkDB All DBs Position Unknown AA seq 1622 aa AA seqDB search MELRVGFRITLVLVILALTLSGERVEAQRAGCKSVHYDLAFILDTSSSVGKENFEKIRQW VANLVESFDVAAEKTRVAVVRYSDRPTTEFNLGKHRTLEDVKRAARNIRYLGGNTMTGDA ISYTTNNIFTEQNGARPVAKGIQRVAILLTDGRSQDYVLEPSKAAAKAGIRMFAVGIGEA LKEELEEIAAEPKNAHVFHVTDFNAIDKIRGRLRRRLCENVLCPNMKVQPDRFKPSSTSY GLEEVPGFDLMDYFNVRDILGTKVDEGQSSYVRLGTMPIVQQTEDVFPQGLPDEYAFVTT FKFRKTSRREDWYLWQVFDKYGIPQVSIRLDGENKAVEYNAVGLTKDAVRAVFKNAEVDN LFDRNWHKIALSVEAKAVSLYLDCKHIQTLPIEDREDIDIQGKTVIGKRLYDSVPIDFDL QRMMIYCDSKHAELETCCDLPNGPCPKKVVTEAPPEEIPTPTPTVVEQKRGPEVNCSCAA GEKGDIGAPGVAGSKGEKGDTGPMGAIGPPGIKGAKGETGRVLSVRGDRGEKGDSGSIGL TGAPGQKGEKGHGGIPGIDGLPGDKGEQGQAGLAGDQGLPGPAGPKGIQGDAGIPGGPGP KGVIGDSGIKGEKGTPGARGEAGLDGLPGKPGVPGKDGFRGLVGAPGPSGFKGDKGERGL PGLPGDVVQKEGLRGEKGIAGPPGPPGADGPPGPPGPPGLLGLPGEPGEFGQRGKKGESG LPGVDGLPGPPGPQGPPGSPGNQGHTGPPGLPGEIGFSGKPGEPGKPGLPGKDGLDGLPG NDGAMGPRGERGTDGFSGKPGPKGDDGPPGPRGPPGERGEAGSPGQPGADGARGDRGIPG ERGLDGPNGPKGERGDKGEVGARGPPGAPGNVANVIPEPGEPGTPGEKGEKGDQGKPGEM GQRGLPGEQGFKGPAGPPGPKGDTGLTGETGRVGDPGPPGVAGPQGLRGLPGNVGIPGII GPPGPAGQRGDKGEPGKPGQTGLAGPPGEPGVTGPPGPTGKGKDGQNGEPGPQGIQGPSG PKGQPGSQGEPGVPGDRGPAGEGKMGPSGLPGNNGEPGPAGLRGPPGVAGPQGPAGHNGL PGRPGDKGSPGEPGKAADLSDLNLKDVCSDCPAGPPGPPGLPGIPGDKGHTGPPGKDGQD GYQGPPGPAGPQGPPGADGGKGIKGDRGPPGGPGEKGDKGHPGPPGHPGAAGLMGTPGND GQPGPAGPPGPPGEKGKEGLKGIQGPPGLPGMIGQPGKMGKDGRLGETGEPGKQGEPGPP GNPGLRGLPGFKGHRGEPGPPGSKGEDGKPGSLGRDGKPGKEGSMGPPGPEGRIGPRGES GKPGEPGPSGKAGLPGTPGLRGDKGEAGNPGLPGFSGPKGPAGPAGPVGPEGKQGMPGRV GDRGVKGDKGDPGIKGDKGHSGESGMPGNPGPPGRKGHTGMMGMSGPPGEIGPPGSQGPS GNPGIPGPRGESVSLEQMRRLIQEELAKQLDAKLAYLMAQMQPAHVKSTAGRPGPPGPPG KDGSPGRSGPPGEPGMPGQNGGEGPRGPMGPKGEKGTRGEKGETGIGERGEQGPPGPIGP AGLPGYGKDGSPGQAGVQGEPGNPGPHGQPGPPGPPGQCDPTQCAYYASLAQRPHTKNVK GT NT seq 4869 nt NT seq  +upstreamnt  +downstreamnt atggaattacgagtgggatttaggatcaccctggtcttggtcatcctggccttgactctt tctggtgagagagtggaagcacagagggcagggtgtaaaagtgtccactatgacttggcg tttatcctggatacctcatccagtgttggaaaagagaacttcgagaagatcagacaatgg gtggccaacctggtggagtctttcgatgtggccgcagagaagacgagagtagctgtggtt cgctacagtgacagacccaccactgaattcaacctggggaaacacaggaccctggaagat gtgaagcgagctgcccgtaacatacgctacctggggggaaatacaatgaccggggacgcc atcagctacaccaccaacaacatcttcaccgagcagaacggagcaaggcccgtcgccaaa ggcatccagagggtggccatcctcctcacagatggccgaagccaggattatgttctggag ccctctaaggcagctgccaaagccggcatcaggatgttcgccgtgggcatcggggaggcg ctgaaggaggagctggaggaaatcgccgccgagccaaagaatgcccacgtcttccatgtg acggactttaatgccattgacaagatcaggggccggctgaggaggaggctgtgcgagaat gtcctgtgtccaaacatgaaggttcaacctgatcgctttaagcccagcagcaccagttat ggtcttgaagaggttccagggttcgacctgatggactacttcaatgtgagagatattctg ggaaccaaagttgatgagggccagagttcttatgttcgccttggcaccatgcccattgta cagcaaacagaagacgtatttcctcaagggctgccggatgaatacgcctttgtgacgaca ttcaaattcaggaaaacctcaaggcgtgaagattggtacctctggcaggtttttgacaaa tatggaatcccacaggtgtccatccgtctggacggtgagaacaaggcggtggaatacaac gctgtcgggctgacaaaggacgctgtcagagctgtgttcaagaacgccgaggttgacaac ctgtttgaccgcaactggcacaagattgccctcagcgtggaggccaaggctgtgtctctg tacctggactgcaaacacatccagactcttcccattgaagacagggaggacattgatatc caagggaagacagtgattgggaagaggctgtatgacagtgtgccaattgatttcgacctc caaaggatgatgatttactgcgattccaagcatgcagagctggaaacctgctgtgatcta cccaatggaccttgccctaagaaagtggtgacggaggctcccccagaagagatccccact ccgacacctactgttgtggagcaaaaaagaggccctgaagtcaactgttcttgtgctgca ggagagaagggagacatcggtgcacctggtgttgcaggttccaagggtgaaaagggtgac actggccctatgggtgccatcggaccgcctggaatcaaaggagcaaaaggagaaactggc agagttctctctgtcagaggtgacagaggtgagaagggtgatagtggcagcatagggttg acaggtgctcctggacaaaaaggagagaagggtcacggcggtataccaggtattgatggc ttacctggagacaaaggagagcaaggtcaagcaggactggctggtgatcaagggctgccg ggtccagctggaccaaagggaattcaaggggatgcaggaattcctggcggacccggacca aaaggtgtcattggtgattcaggtataaaaggtgaaaaaggaactccaggagccaggggc gaagcaggtttggacggattaccaggaaaacctggagttcctgggaaagatggtttcaga ggactggttggtgcacccggtcccagcggatttaaaggcgacaagggggagagaggcctt cctggattacctggggatgtggttcagaaagaaggcttacggggtgaaaagggaattgct ggacctcctgggcctccaggggccgacggccccccagggcctcctggtcctcctggacta ctaggtctgcctggagagcctggagagtttggccaaagggggaagaagggagagagtgga ttgcctggcgtggacggccttcctggacctcctggtcctcagggtccacctgggtcacca ggaaaccaaggacacactggacctcctggtctgcctggtgaaattggattttcaggcaaa cctggagaacctggaaagcctggtcttcctggtaaagacggtctcgacggtcttcctgga aacgatggtgccatggggcccaggggagagcggggaacagatggtttttctggaaagcct ggacctaagggtgatgatgggccacctggaccaagaggacctccaggggagagaggagaa gctggttcccctggacaaccaggtgctgatggagcgagaggagacaggggcattccggga gaaagaggactggatggaccaaatgggccaaaaggtgaaaggggagacaagggtgaagtt ggagcgaggggaccgcctggcgctccaggaaatgtggcaaatgtcatccctgagcctggt gaacctggaacacctggagaaaagggagagaaaggagatcaagggaaaccaggagagatg ggccaaagagggttacctggtgaacaaggttttaagggaccagctggacccccgggaccg aaaggtgacactggacttacaggagagacaggacgcgttggagaccctggtccacccggc gtagccggtcctcaaggtcttcgtggattgccaggaaatgtgggcatacctgggatcatt gggcctcctggtccagctggacagagaggagacaagggtgaaccaggtaaaccaggacaa acaggtctcgcaggcccacccggagagcccggtgtgactggaccccctggaccaacgggg aaagggaaagacgggcaaaatggcgaaccaggaccacagggaatccaaggaccctcaggg ccaaagggtcaaccagggtcacaaggagaaccaggagtaccaggagacaggggtcctgca ggagagggcaaaatgggaccatcggggctcccaggaaataatggggaacctggacctgcg ggcttgaggggtccaccaggagttgctggtcctcagggcccagcaggacataatggttta ccaggaaggccgggagacaaaggatcacctggagagcctggaaaggcagccgacctctct gacctaaatttgaaggatgtttgctcagactgccctgcaggcccacccggaccacccggg ctcccaggaatccccggagacaaaggacacacaggacctccggggaaagacggtcaagac ggttaccaaggcccgccgggaccagccggacctcaagggccccccggagccgacggaggc aagggtataaaaggtgatcgaggacctcctggaggccctggagagaaaggagacaagggt cacccaggaccccctggtcatccaggtgctgctggcttgatgggtacacctggtaacgat ggacagcctggccccgctggtcccccagggccccctggagaaaagggcaaagagggtctg aaaggaatccagggaccaccgggtcttcctggcatgattggtcagcctggaaagatggga aaggatggcagactaggtgaaacaggagaacctggcaagcaaggtgaacccgggccacca ggaaaccctgggctgaggggactcccaggctttaaaggccacagaggagaacctggacct ccaggatctaagggagaagatggaaagcctggatcgctcgggcgtgacggcaaacctggg aaggagggctctatgggacctccaggtccagagggacgtattggaccaagaggggagtcg ggcaagccaggtgaaccagggccgtcgggaaaagcaggtctccctggaactccaggtctc aggggagacaagggagaggccggcaacccaggattacccggatttagtgggcctaaaggc cccgcgggtccagctggtccagtgggccccgagggaaagcaggggatgccgggcagagtt ggtgatcgtggcgtcaaaggagataagggtgacccaggtataaagggagataaaggacat tcaggagaatcaggaatgcctggaaacccaggacccccaggcagaaagggccacacagga atgatgggcatgtcaggaccaccaggagaaatagggcctcctgggtcacaaggaccttca ggaaaccctggtatcccaggaccaaggggagagtcggtatcactggagcagatgagacgg ctcatccaggaggagctggcaaaacaattagatgccaaactggcttacctcatggctcag atgcagccggcgcatgtgaagagcacagccggccgtccgggacctccgggccctccaggt aaggacggcagtcctggacgatctggccccccgggagagcctggcatgcctggacagaat ggaggggaaggacccagaggacccatgggccctaaaggtgagaaaggaacaagaggagag aagggagaaactggtattggtgaaagaggagagcaaggccctcctggcccgataggtcca gccggtctgcctggctacggtaaagacggaagcccaggacaggccggagtccagggagag ccaggaaaccctggtccccacggtcagcctggacctccaggtcctcctggccaatgtgac cccacccagtgtgcctactatgccagcctggcacaaagaccccacaccaaaaacgtcaag gggacttaa

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