Seriola dumerili (greater amberjack): 111228182
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Entry
111228182 CDS
T05606
Name
(RefSeq) transcription factor HIVEP3-like
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111228182
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111228182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
111228182
NCBI-ProteinID:
XP_022609707
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
METLHSRLTTGEQSGDQEHCQPESPHRDLQPKSPSQPRQQQQTGSPKPHGALQQPKQSRR
QHPERKRLRHQRQSIDSDTVLEDKHEPSKATTVSSLSPGVPPSSAGSPTQSKPETQEGTP
KQKRERKPQRPGKYVCTYCGRACAKPSVLQKHIRSHTGERPYPCAPCGFSFKTKSNLYKH
RKSHTHRVKAGLALGEPRSLEEQVTESEDETRQLSSASSHAERQSSVASIKSHETDKAKG
NTAGNDDSYAVKKRLALRLSRGKHAPQDSSDEKSSSLILGSKGSTESGYFSRSESTEQSQ
DSPPNTSAKSYAEIILGKYGRLGHLQRMSRHQNQQPSGQKDKSIPFTVPKKQVIDHITKL
ITINEAVVDTSKIDSVKPRRFSLSRKNSSESQKGSSTKEPLIHSPKTGDLSYKNSGSITM
GVPCEKFHHQSLNVEQPAGQTSTAPLVRSHSMPSAASSFDTSGGGPSKFRLSQSFDERPP
SEIAASRRYGMLRRQPAIEIPLGAELTKEEQDGSHPFYPDSVTTVPDHKQSQPQPYECEA
CGTGCKDWEGYKKHKQSLCLAHHPRNEVVISQMEFSQLINHAVKTGASAVRKRRKEESFE
FDDPSSPSLPSPALLSGQCKDESSVPYEGTRRPTLQTCSVIQHTSSFEKQESLCNESQGS
EATKNSPPHDEHQLVPQKQPQQQPTKLATRKLVRQHNVQVPEILVTEDSNMTTEISVDPT
STAKHSEKPDEFQWPQRSPSLAQLPIEKLPPKKKRLRLAEAAQSSGESSFDSISLPRSPS
QDSSASYASSRSTSFEESNRPDMEIATSSPLRRSRAPHMLTVPGVHQHREMRRSASEQAP
HDPQLSVLMAETRSKSFDYSCLSPERSAVGWRERRKCLLMRHTAIRDPDEEEEDQCAISS
RSPEHIATSTSSQVSQTSVCCTRSPSSPLSDPLKDEASRIHTGQPPPQAPQPYPSHGPSG
AARARYLPMSTGLKLEIPLQHDDYSDIRVSHSHIQQSVPHITSSLELLRPVTSPSVAVRL
QTDTLTPACAIYTMLSQATSPRPQEAVDAVSHNVGVLTSEYRNHRSPDFELWSDDGMRLS
GSGGNKRMLSPSNSIEIPPDLLSSTCNSWCYLNYIKPNPSALDEQKPSVYSSWSTSSYDP
NPPGLSSKTALSLLHCKQRLSPSIYTLSPMSVRTTESMEQEDNKRPCSTEVYNSQSYCRD
HEGARKGQTSSEDNGSNREEGKEEEKKEAEEEEEVQPCSRNEQPPEVWISESGSNEKYGV
LHGGGGGKCQREDCGFHLKCTDRSTGSSPCNCSQCNVAFKAKGSLADHLRSEPRGKETCC
YPDDTDEGVCEDQSVHPDKQSQSSDLGGGGHDGDDGAKDKDGRCEDSWSKVAESSLSSDS
EKPCSGSSPMEPEPSRPLALDPKDSTQKTSARTRRALFARRRLDASASVSSRGSHSPTAQ
SLTPRREPSPPCSPSPGPQRPPAPPPSLSPSSCHVSTSPLRPVSPVRGLSPVIVQPHGSE
SSGPPGSLADSSAQCQTCLHPRDRASAARLSVDEVGLTHITPHPTRLRGAHNLLSHLPLH
SQQPSRAPSLLIPIGGIHMIQPRSPLPLYSLVSSPAAATVNPTGTGTPWRLGGSLKGRFP
QLQRQDTLKETSPSSRGSPAHPEALGEMSGSSRPDALLNRKSQGCFSVQRAPSPRTETRH
PEVSTDAHVTGRCVYHESAQGQNETPSSQT
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggagaccttgcatagtcgcctgacgactggggagcagtccggagatcaagaacactgt
caaccggagtctcctcaccgagacctgcagcccaagtctccctcccagccccgtcagcaa
cagcaaaccggctccccaaagccccatggcgcgctacagcaacccaaacagtccagaaga
cagcatcctgaacgaaagcgtctcaggcatcagcggcagagcattgactcagatacggtg
ctggaagacaaacatgaaccatcgaaagcaaccacggtttctagtttgtcaccaggagtc
ccgccgtcctcggcaggtagcccgacccaatccaaaccagaaacccaagagggcacccca
aaacagaaacgagagcgtaagcctcagagaccaggaaaatatgtctgcacttactgtggc
cgtgcatgtgcaaaacctagcgtcctacagaaacatattcgctcccacacaggtgaaaga
ccctacccctgcgccccatgtggcttctcttttaagaccaagagtaacctgtacaaacac
cgcaaatcgcatacgcacagggtgaaagcaggtctggcgcttggggagccaagatctcta
gaggagcaagtcactgagtcggaagacgaaacccgacagctgtcatcagcctcttcccac
gcagaaagacaaagcagtgtagcctcaatcaagagtcatgaaacagacaaggccaaaggt
aacactgcagggaacgatgactcctatgcggtgaaaaagagattggccttgcgtctaagt
agagggaaacatgctccccaagattcatcagatgaaaagtcctcatctctaatattaggc
agcaaaggcagtacagaatccggctatttctctcgctctgaaagtactgagcaatcacag
gacagtcccccgaacacaagtgccaaaagctatgcagagatcatcctcggcaaatatgga
cgtctcggacacctacagaggatgtcccgtcatcaaaaccagcagccctctggtcagaag
gacaaaagcatcccattcacagtgcccaagaagcaggtcattgaccatattaccaaactc
atcaccatcaatgaggcagtggtggacacgagtaaaattgacagtgtaaaaccaaggagg
ttctcgctctccagaaagaatagttcagagtctcaaaagggttcctctacgaaggaaccg
ctaattcatagccctaaaactggagatctgagctataaaaacagtggctccatcaccatg
ggagttccatgtgaaaaatttcatcatcagtccctaaatgtggagcagccagctggccaa
acatccaccgcccctctggtgagaagtcactcaatgccatctgcagctagttcatttgat
acctccggtggtggccccagcaaattccgcctaagtcagtccttcgatgaacggccgcct
tcggaaatagcagcgtcccgtcgttatgggatgctaagacggcagccagctattgaaatc
ccgctcggtgccgaactcacaaaagaggaacaggatggttcccatccattttaccccgac
agcgtaaccactgtgcctgaccacaagcagagtcaaccccagccatacgagtgtgaggcc
tgtggcactggatgcaaggattgggaaggttataagaaacacaagcaaagcctgtgctta
gcgcatcatcccagaaacgaggtggtgattagtcaaatggagttctcacagctaattaac
catgctgtcaaaacgggagcttcagcggtacgcaagaggaggaaagaggagagttttgaa
tttgatgacccctcttctccttcgttaccctctcctgccctcttgtcaggacagtgtaaa
gatgaaagcagcgtaccttatgagggcaccagaagacctacactgcaaacctgttcagtt
attcaacatactagttcatttgaaaaacaggaatctttgtgcaacgagagtcaaggctcc
gaggcgacgaagaactctccacctcatgacgaacatcaactagtgcctcagaaacagcct
caacagcagccgacgaaactagcaactcggaagctggtccgtcaacacaatgtgcaagtt
ccagaaatactggtgacggaggactccaacatgaccacggagatctcagtagatccaacc
tccacagcaaaacattcagagaaacctgatgaattccagtggcctcagaggagcccctct
ctggctcagctccctattgaaaaactgcctccaaagaagaagcgcttacgtctagctgag
gctgcccagtcctcaggggaatccagttttgactcaatatctctgccccgtagccctagt
caggacagtagtgcctcctatgcatccagtcgttccacatcctttgaagagtcgaacagg
ccggacatggagatagcaacatcatcaccactgaggaggtctagagctccccacatgcta
acagtgcctggggtgcatcagcacagagagatgaggcggtcagcatctgagcaggcgcct
catgacccgcaactaagtgtcctaatggccgagacccgcagtaagtcttttgactacagt
tgtctgtcaccggagcgctctgcggtcggctggagggaaagaagaaaatgtctccttatg
agacacactgctatcagagatccagatgaggaggaggaagaccagtgtgccatatcaagc
cgcagtcctgaacacatcgcaactagcacatcctctcaagtaagccaaacctctgtgtgc
tgcactaggtccccgtcttctcctttatcagatcctctaaaagacgaggcctcgcgcatc
catacaggacagccccctcctcaagcaccacagccctatccttcacatggaccatcaggg
gcagccagggctcgctacctccccatgtccacagggttgaagctggagattcccctacaa
catgatgattattcagacattcgagtaagtcactcccacatccaacagtccgtccctcac
atcacgtccagtctggagttactgcggccggtcacatctccttcagtggcggtgcgtctc
caaacggacaccctcaccccagcatgtgccatatacaccatgttgtctcaggcaacttcc
cctaggccccaggaggcagtcgatgctgtttcacacaacgtaggtgttctgacatccgaa
tacagaaaccacaggagtccagactttgagttgtggtctgatgatggcatgaggttatcg
ggctcagggggcaacaagcgcatgctttccccttcaaacagtatagagatcccccctgat
ctgctgtccagcacctgtaacagctggtgctatttgaactacattaaaccaaacccttca
gctctggatgaacagaaaccctcggtctattcatcgtggtccacaagcagctatgacccc
aacccacctggcctctccagcaagacggctctctctctgctgcactgtaagcagaggctc
agtccctccatctacactctatcccccatgtcagtcaggacaactgagtcaatggagcaa
gaggacaacaaaagaccatgctccactgaggtctacaacagccagtcgtactgcagagac
cacgagggagcgaggaagggacagacgtcgtcagaggacaacggatcaaacagagaagag
gggaaggaggaagagaagaaggaggcggaggaggaggaggaagtccagccatgctccaga
aatgaacaacctcctgaagtttggatctctgagtcgggatcaaatgagaagtatggcgtc
ctgcatggcggaggtggagggaagtgccaacgtgaggattgtggattccacctcaagtgc
accgaccgctccacggggtcgtctccgtgtaactgcagtcagtgtaacgttgctttcaaa
gccaaagggagcctcgccgaccacctgaggtctgagccacgcggaaaagaaacctgttgt
tacccagacgacacagatgaaggagtctgtgaggaccaatcagttcaccctgacaagcaa
agccagtcctctgatctgggaggaggtggacacgatggggacgacggtgcaaaggacaag
gacggtagatgcgaagacagctggtccaaggtggccgaaagctccctctcctccgacagt
gagaaaccttgttcgggaagttcgccgatggagcctgagcccagccgaccactcgcactc
gaccccaaggattctacccagaagacctcggccaggaccaggagggccctgttcgcccgc
aggcgcctcgatgcttcagcctccgtatcctccagaggctcccattctcccactgctcag
tccctgactccgcggagggagccgtctccaccgtgtagcccatcgcccgggcctcagcgg
ccccctgctcctcctccctccctctccccgtccagttgtcatgtctccacctccccgctg
agaccagtctcccccgttagaggtctttctcctgtaatagtccagccccatggatcggag
tcctctgggcctccgggctccctggcagacagctctgctcagtgtcaaacctgtcttcac
ccgcgggaccgagcgtctgcagcgagactgtctgtggacgaggtcggtctgacccacatc
accccacatcccacgcggcttcggggagcccacaacctcctgagtcacctccctctgcac
tcccagcagccgagcagggccccgagcctcctgattcccatcggggggattcacatgatt
cagcccaggtcccccctcccgctttacagcctggtgagcagccccgcagcagccacagtt
aaccccacaggtacagggacaccctggaggctggggggctctttgaaggggaggtttcct
caactgcagcgacaagatactctcaaagagacgtcgcccagcagccgaggcagcccggcg
caccccgaggcgttaggggaaatgtccgggagcagccgcccggacgctctgttaaacaga
aagagtcagggatgtttcagcgtccagcgagcgcccagccccaggacagagacgaggcac
ccggaggtgagcacagacgcacatgttacagggaggtgtgtttaccacgagagcgcccaa
ggccaaaacgagactccctcctcccagacataa
DBGET
integrated database retrieval system