Seriola dumerili (greater amberjack): 111228241
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Entry
111228241 CDS
T05606
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111228241 (zeb1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
111228241 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-met
zf-H2C2_5
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
111228241
NCBI-ProteinID:
XP_022609801
UniProt:
A0A3B4TE16
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
DEPPREHCWDPAKEDGVSDGEDDVSTDALVEEMLQQGDTAVIYPEAPEDEPQRQGTPDAS
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQL
ERHMTVHKAGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISVNGRPRLGNTKTQTQGPSPVLPTPPSVLRTQIREKLEH
SKPLQEQLPLNQIKTEPMDYEYKPTVITSPAVTAMNGGVFNGGAAAPLQGTVQAVVLPTV
GLVSPISINLADLQNALKVAVDGNVIRQVLENNAKGQGQVNSGLTTGMLHPPQQQLISAI
SLPIVGQDGNAKIIINYSLDQGQLTAQNLKKEPEPVSPAHTTTDIFKSQKLPEDLTIKGS
RSNETKEKEEKTTKTCLLCDNCPGGLETLHALKHCKKDGLRLNGAGLDKSESAVAALLSE
GGLCNQPKNLLSLLKAYFALNAEPTKDELAKISDSVSLPIHVVKKWFDKMQEGQISLGAP
TPPSEEEDTCEANSVVSLVPGKDTSTMSPSVTQDSPTEATPAEINGAHSSPASPSPLNLT
AGGPVPAQPPQSTEGPLDLSLPKPPREEAERVVAKASVYPSPSSRSTNQDQPLNLTCTKK
EASPLSAMGAGPVALYASQPSAKPLDIVTTMQCLRALATNNKQTILIPQLAYTYTTTANS
PAGTEMHETIHLNGVKEEKPDTGSEGVSAVEEQNDSDSGPPRKKMKKTDSGMYACDLCDK
IFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKETQNQGGGRESPEVDGEVQAELEALSQAQAQILVPSQLDLDER
GSSTREDEESEEEEEEEEEGEGMVDMDEIQVVQIGDEGGDEEEEEEEEEHGDRNEEEMER
VTVEEGGEEETTEVEMKLEEEEETDTRQEEELESVQEEEEVKIEEEGVMDTEGGVTEEGK
TGEVTEESGGETNRNTVSEDEKQTPQEEGDTD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
acgaactacaataatgtggtggaggccggctcagactcagatgacgaggacaagctgcac
attgtggaggaggaaggcagcctggcagacggggccgactgcgacagcaccctgccagac
gacgagccccccagggagcactgctgggacccagcgaaggaggatggtgtgtcagatggt
gaggatgatgtgagcacagacgccctggtggaggagatgctccagcaaggagacacagcg
gtcatctacccagaagcccccgaggacgagccgcagcgacagggcacccccgatgccagt
gtccatgatgagaacggaactcctgactcgttctctcagctgctcacctgcccgtactgc
gctcgtggctacaagcgttacagctctctgaaggagcacatcaagtaccggcacgagaag
accgaagagagcttcagttgccccgagtgcagctacagcttcgcgtaccgtgctcaactg
gagaggcacatgacggtccacaaggccggacgggatcagagacacatcacacagtcgggc
ggcaatcgtaaattcaagtgcactgaatgtggcaaagcatttaaatacaagcaccatcta
aaggagcacctacgcatccacagcggagagaaaccctatgagtgctccaactgcaagaag
cggttctcccactcaggttcatacagctcccacatcagcagtaagaagtgcatcagcgtc
atctcagttaacggcagaccgcggctggggaacaccaaaacccagacccagggtccatca
ccagtgctgcccacaccgccctcagtcctccgcacacagattagagagaagctggaacac
agcaagcccctgcaggagcagctgcctctgaaccagatcaagactgagcccatggactac
gagtacaagccgacagtgataacatccccagctgtgactgccatgaacggtggggttttc
aacggcggtgctgcagctcctctgcagggcacagtgcaggccgtggtcctgcccactgtg
gggctggtgtcgcccatcagcatcaacctggcggacctgcagaacgctctcaaagtggcg
gtggacgggaacgtcatccgtcaggtgctggaaaacaatgccaaaggccaggggcaggtg
aactcggggttaaccactggaatgctccaccccccacagcagcagctcatctcagccatc
agtctgcctattgtgggtcaggatggaaatgcaaaaatcattataaactacagtttggac
cagggccagctcacagcccaaaacctgaagaaagagcctgagccagtctcaccagctcac
accaccactgacatcttcaagtcccagaaactcccagaagatcttacaatcaaaggcagc
aggtccaacgagactaaagagaaagaggaaaagaccactaaaacttgtctcctgtgtgat
aactgtcccggtgggctggaaacactccacgccctcaagcactgcaagaaggatggtctc
aggctgaacggagcaggcctggataagtctgagtctgctgtcgctgcgctgctgtcagag
ggaggactctgcaaccagcccaagaacctcttgtccctgctcaaggcctactttgcctta
aatgcagagcccaccaaggacgagctggcaaagatctctgactcagtcagcctgcctatc
catgtggttaagaagtggtttgacaaaatgcaggagggtcagatatcactgggtgctcca
acacccccctcagaagaagaggacacctgtgaagctaacagtgtggtgtctctggtccca
gggaaggacacatccactatgagcccctctgtgacccaggacagccccacagaggccacc
ccagcagagatcaacggtgctcacagctcgccggcctccccctcgccactaaacctgaca
gctggaggtccggtaccagcccaacccccccagagcaccgagggaccccttgacctgtcg
ctgccaaagccccccagagaggaagcggagagagtggtggccaaagccagcgtttacccc
tccccttcctctcgctctaccaatcaggatcaacccctaaacttaacttgcacaaagaaa
gaggcatcgccactctcagccatgggcgcaggcccggtcgcactgtacgccagccagcca
agtgccaaacccctcgacattgtgaccacaatgcaatgcctaagggctctagccaccaac
aacaaacagactatcctgatcccccagctggcttacacctataccactacagcaaacagc
cccgcggggacggagatgcacgaaaccatccacctcaacggagtgaaggaggagaaacca
gacacgggctcagagggtgtgtccgctgtggaggagcagaatgactcagactcaggccct
ccgaggaagaagatgaagaagacggacagcggcatgtacgcctgtgacctgtgcgacaag
atcttccagaagagcagctcactgctgagacacaaatacgaacacacagggaagcgacct
cacgagtgcggcatctgcagcaaggctttcaaacacaaacaccacctgatcgaacacatg
cggctccactcgggggagaaaccgtaccagtgcgacaagtgcggcaaacgcttctcccac
tcgggctcctactcccagcacatgaaccaccgctactcctactgcaagaaggagacgcag
aaccaaggaggaggccgggagagccccgaggtggatggcgaggtccaggctgagttggag
gccctgagccaggcacaggcgcagatcctggtcccctcccagctggatctggatgagcga
ggaagcagcacaagagaggatgaggagagcgaggaagaggaggaggaggaggaggagggg
gaaggcatggtggacatggacgaaatccaggtagtgcagataggcgacgaaggaggggat
gaggaggaggaggaggaggaggaggagcacggggacaggaacgaggaggagatggagaga
gtaacagtggaagagggaggagaggaggagacaacagaggtggagatgaaactggaggag
gaggaggagactgacacgaggcaggaggaggagcttgagagtgttcaagaagaagaggaa
gtcaaaattgaggaagagggggtgatggatacagagggaggggtgacggaagaggggaaa
acaggggaggtcacagaggagagcgggggcgaaacaaacaggaacacagtttctgaagac
gagaagcagacgccgcaggaggaaggagatactgactaa
DBGET
integrated database retrieval system
