Seriola dumerili (greater amberjack): 111228265
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Entry
111228265 CDS
T05606
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sdu03037
]
111228265 (ttc28)
Cilium and associated proteins [BR:
sdu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
111228265 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
TPR_14
TPR_9
TPR_19
TPR_NPHP3
TPR_6
PUB
BTAD
HlyE
ARM_TT21_5th
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
111228265
NCBI-ProteinID:
XP_022609844
LinkDB
All DBs
Position
Unknown
AA seq
2471 aa
AA seq
DB search
MEKQATLKEKFSIFGSRTVGRPIRCVPGDDGTRYGLSKAEFMEKVQQSNEACQRGDFQAA
VHLYSDALQADPQNCILYSNRSAALLKLGHHQAALDDAEKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARDTQDRLLEGDASCGLGAVYQAMGEYETALRCHQSDLEIAEEAGSPTRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSEGVSDFQ
EAGGSGVVSGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLTRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIN
GLGSSAKAHCRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMVAELLG
CQPLAGCSATKERVMSALTQAECAHFATHISWKLAALVLTPNPEGVPGGASASVGVGTVG
RGAGGRRGSSGRGRKGSIGSGYTIPESLHMQDDSSDVESICDSPPLQEFLLTAADILDLR
LPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYTA
LLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYP
DRVRDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSA
GTGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRLHQV
LVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKLAN
RRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPMGYSSLPFSPPCLD
NQASDAISVYSLSSVASSMSFASKSDCDFLGRRTGATAHYSVHKHPHVPRSRSSPHGAAA
AVAGARGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVVGGSSTGAGRGYT
VSVSSRGSVSTPTSPVKTCLVPSPNSPFQKVGKVSSSDTGESDQSSTETDSTVKSQEEKT
VPLDPQELAQKILEETQSHLRAVGSLQRAGAEGGTAGGTSARSSAFRSSETSAFSRPNSS
ASGRAQSSPRPKPPSRSSSLQKISSGYNSPAVSESSQKEGSHPSPTLDSHAQFKLKYPSS
PYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSTSADAPDLDRLRRGVIDEK
VQAIHNLKTFWANAAAQQQQQHLGPVKAVHSAPGPLASASRDVLSLLNLSPRHCSPHDTQ
DSLELRELGLQSLDRGSKNSSNGHHCSNTRKVAPSPTISTSSSPGARSIRLPAGNGYKFL
SPGRFFPSSKC
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcgactctgaaagaaaagttttcaatcttcggctctcggacagtgggc
agacctatccgatgtgttcctggagacgatgggaccaggtatggtctcagcaaagcagag
ttcatggagaaagtgcagcagagcaacgaggcttgtcagcgcggtgacttccaggcggcc
gttcatttgtacagtgatgccttgcaagccgacccacagaactgcatcctgtatagtaac
cgttcagcagcccttctcaaactgggacatcaccaagcggctctggatgatgctgaaaaa
gcttgtgagcttaatcccaaatggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcactggccgccttcgcctccgggctggcccaagacccc
aagagcctacagctactggtgggcatggtagaagccgccatgaaatcaccactacgagag
tctctcgagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctgctgacagcaggccaccacacggcctctgttgtg
gtgctggaagccgctttgaagatcggcacgtgcagcctcaagctccgcggctccgtcttc
tcggccctcagcagcgcccactggtctctgggcaacaccgagaagagcaccggctacatg
cagcaagacttagaggtggcgaagaccttaggtgaccaaacaggggaatgccgtgctcat
gggaatctgggctcggcattcttctccaagggaaactatcgtgaagcgctgaccaaccat
cgcaaccagctggttctggccatgaagctaaaggacagagaggctgcttcaatggcactg
agcagcttgggccatgtatatacagccataggggactatccaaacgccctagccagccac
aagcagtgcgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgcgagctg
ggaaacatgggggccgtctacatcgccatgggagactttgacaatgctgtccagtgccat
gagcagcacctaggaattgccaaggccctggaaaataaacgagaagaagctcgggcctat
agtaacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccac
actcacgttctggagcttgcccaagagttggaggaaaagtccatcgagatgagagcctac
gcaggactgggtcatgctgcccgctgcatgcaggacttggagagggccaagcagtaccat
gaacagcagctgtctatagctgagggtttgaaggacagggccgcagagggaagggcctcc
tccaatctgggcatcattcaccagatgaagggggactatgagactgcactgaaactccac
aaaacacacctggccattgctcaggagctgaatgattacgctgctcagggccgggcctat
ggtaacatgggtaacgcctacaatgccctgggagcctttgaccaggctgttcgctaccac
cgccaggagctgcagatctccatggaggtcaatgaccgggcctcgcaggcttccacccat
ggcaacctggctgtggcttaccaagccctcggagcccatgaccgcgctctgcagcattac
cagaaccacctcaacatagctcgtgagctcagagacgtccagagcgaggcgcgggctctg
ggcaacctcggcaacttccactgctctcgaggagagttccctcaggccgtgccctactac
gagcagtacctccggctgtcccctgacctccaagacatggagagtgaagggaaagtttgt
cacaatctgggttatgcccactactgtctgggcaactatcaggatgctgtcaaatactat
gagcaggacctagctctggccaaggaccttcatgacaaactgagtcaggccaaggcatac
tgtaaccttggtttggcattcaaggccctaggagacttcactaaggcagaggagtgtcag
aaatacctgctgtcactggcccagtctctgaacaatgcacaggctcgcttcagagctctg
gggaacctgggagacatatttgtctgtaaaaaagacgtggccggagccattcagttttat
gagcagcaactggccttagctcaccaggttaaggagcgtaggatggaggcctgtgcctac
gctgccctcggggccacttacagacttgtgcagaaatatgacaaagctctgggctaccac
acccaggagctggaggtgtaccaagagctgggcgacgtgtcgggagagtgcaaagcccat
ggtcacctggcagctgtctacatggccctggggaagtacgccatggccttcaagagctac
gaagagcagttggagctaggtcgaaggctgaaagatcccgtcgtggaggctcaggtgtac
ggaaacatgggcatcactaaaatgaatgtaggggtgatggaggaagctattggctacttg
gagcagcagctggccactttgcagcagctgagtggcaacgaggcggtaatggacaggggc
agggcctatggaaacttgggagactgttacgaggctctgggagactttgaggaagccatc
aagtactatgaccagtatctgtcagtggcccagagcctgaaccgcatgcaggaccaggag
aaggcctacagaggtttaggcaatggacaccgggccatgggaaacctacagcagtcactg
gtgtgttttgaaaagcgactagtagtggctcatgagctaggggagtgtggcggcaaggct
caggcctacggcgaactgggtgctctccacagtcaactgggcaattacgagcaggctatc
tcctgtctggagcgtcagctggccattgcccgtgacacccaggacagactactggagggc
gatgccagctgcggtttgggcgctgtatatcaagctatgggagagtatgagacagccctg
cgatgccaccaaagtgacctggagattgcagaggaggcaggcagcccaacacgccaggcg
cgcgcctacggcaacttgggccttacctatgagtcgctaggaaactacgagcgggcggtc
gtgttccaagaacagcacctaagtgtggcggctcagactaatgacttggctgccaagacg
ctggcctatggtagcctggggagaacacaccacgcactgcaaaactactcacaggctgtc
atgtacctgcaggaaggcctgcggcttgcagagcagctggcacggcgtgaggacgaggcg
aagatccgccatcgtctggggctctctctatgggccagcgggaatctggaggaagcccaa
catcagctctaccgggcatctgcactgtttgagaccatccgccacgaagcccagcacagc
acagactataaactttccctgtttgacctgcaaacctcctgctaccaggcactccaaagg
gtccttgtcagcctaggccaccacgatgaggccctggcagtggcagagcggggtcgtaca
cgagccttcgctgacctcttggtggagaggcagacgggccagcaggactcagacccctac
accccagtaacggtggagcacatcctggacaccgtcaacagccagagggccttggtgctg
tatttctccatggctgctggttacctgtacagctggctgctggctccaggagcaggtatc
ctgaagtttcatgaggtgtacctgggcgagggcgtatcagaaggagtgtcagacttccag
gaggcaggcggcagcggagtggtcagcggctcgtcgttggagcagcacattgccagcgcc
cgggaggccctcggagttgagtcttattacagccgcgggtgttcgagcagtgagacggag
agtgaggctggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactct
gtcactgatccaacaggcttcctgcgcatggtgtccagaaacaacttgttcaacaggagt
tgccagagtatgaccagcctgttcagtaacaccatgtctcctgccaaagatgggaactcc
tccctgactcgccgctccagcaacctcggcaagcctccactccgggcactttatgatttg
ctcatcgcacctatggaggggggcttgatgcactccagcgggcctgttggcagacacaga
caactggtaatggtgctggagggagaactgtacctcattccattcgctctgctaaaagga
agctcatctaatgaatacctgtatgagcgcttcagcctcatcgctgttccctccatcaat
ggccttggatcaagtgcaaaggctcactgtcggcgcccgggaccagctccttgcggtggt
gtctcaatggcagcggtggtggggaaccctcgactgccctcacctgtgatggaccgctgg
ctgtggggacccatgccctctgcagaggaggaggctctgatggtggctgaactgctggga
tgccaaccactggctggctgttctgctaccaaggagagggtgatgagtgccctcacacaa
gctgagtgtgcccactttgccacccacatttcctggaaattggcagctctggtgctcacc
ccaaaccccgagggcgtgcctggaggggcaagtgccagcgtgggagtgggaacagtgggc
agaggtgcaggggggaggagaggcagcagcggtcgaggcaggaagggctccattggaagc
ggctacaccatcccagagtctctccacatgcaggatgacagcagcgatgtggagagtatc
tgtgacagtccacccctccaggagttcctcctcacagctgcagatattttggacctgagg
ttgcctgtcaaactggttgtgctgggttcataccaggagtccagcagtaaggtcacagca
gatggtgtcgtgggattgaccagggccttcctggctgccggggctcaatgtgttctcgtg
tccttgtggcccgtccctgtcgccgcctccaaagtctttgtccatgccttctacactgcc
ctgctgaatgggaccaaggctagtgcggcactggcagatgccatgaagactgttcagagc
agcaagcagtactcacacccctccaactgggcaggatatatgctgattggcaacgacgtg
aagcttaacagcccatcttccctcatcggccaagccttggcagagattctgcagtatcca
gatcgagtgcgtgatgctctgagagttctactccacctggtggagaagtctcttcagagg
atacagaacggccagcgtaactccatgtatacatcccagcagagtgtggagaacaaggtg
gggggcgtccctggctggcaggccctgctgacagctgtgggcttccgtctcgattctgca
ggcaccggtatccctgctgctgtcttctttcccactgctgacccaggagacaggcttcag
cagtgcagcaccactttacaatcactgctgggtctgccgccgccagctctccaggctttg
tgcaaactcatcacagcttcagaggcaggagagcagctcatcaaccgactccaccaggtg
ctagtccaactccagacaggagagaaagaacaggatttctccctcttgcccattcaggtg
tccatcagtgtgcagctatggagactgccaggatgccatgaatttctggccgctcttgga
tttgacttatgtgaggtaggccaagaagaggtggtgctgaagacaggcaagctagccaac
cgccgcaccttgcactttgctctccagtctctgctggcgctgtttgactccacagaactg
cccaagcgtctgagcctggacagctcatcttccctcgagtctctagcttctgcccagtct
gtgtccaaccccctgcccatgggatattcaagtcttcccttctctcctccttgcctggac
aatcaggcatcagatgccatctctgtctatagcctcagctctgtagcctcctccatgagc
tttgcctccaaatcagactgtgacttccttggtcgacgcactggggccacagcacactac
tctgtccacaaacaccctcatgttccccgtagtcgttcctcacctcatggggcagctgct
gcagtggcaggagcccggggggacgaggaggaatatgagggtttttccattatcagcagc
gagccgctaggaagtcactgtgactccctgcctctgccgccaggccacagccagcgccat
caccgtggcggcaggggggttgtcggcgggtctagcacaggagcagggagaggctacact
gtatcagtatcatcgaggggcagtgtcagcacccccacatctcctgtcaaaacatgcctg
gtgcccagcccaaactcaccattccagaaggtgggtaaggtgagcagttcagatacaggt
gaatctgaccagtctagtacagagaccgacagtactgtcaagtctcaggaagaaaaaact
gtccctctggatcctcaggagctggcccagaagattctggaggagactcagagccatcta
cgggctgtgggtagtcttcagcgagcgggggcagagggtgggacagctggaggaacttca
gctcggagcagcgccttccgctcttctgaaactagcgctttcagccgtcctaacagcagt
gctagtggccgagctcagtcttccccaagacccaaacctccctcacgttcctcctcactg
cagaagataagctctggctacaatagtcctgcagtctctgagtcttcccaaaaggaaggc
agccatccttcacccactctggacagccatgcacagttcaaattgaagtacccaagctcc
ccatatagcggccacatctctcgttccccaagtaatgtgtctcccagttctggtcaccag
tccccggctggtagtgctccatcccctgccctctcctactcctctaccggctctgcctgc
tctacatcagctgatgctccagacttggaccgactaagaagaggggtcattgatgaaaaa
gtccaagcgatccacaatctgaagaccttttgggctaatgctgcagctcagcagcagcag
caacatctaggtcctgtcaaagcagtccacagtgctcctggacccctcgcttctgccagt
agggatgtactgagccttctgaacctctccccacgccattgctcccctcatgatacccaa
gacagcctggagctgcgggagctggggctgcagtcactggacaggggcagcaagaactct
tccaatggacaccactgctccaacaccagaaaagtggccccgtcacctactatttccaca
agcagtagccctggtgctcgttctatccgactacctgctggcaatggatacaagttcctg
tcgcctggaagatttttcccttcctctaaatgctga
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integrated database retrieval system
