Seriola dumerili (greater amberjack): 111228395
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Entry
111228395 CDS
T05606
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111228395
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sdu03310
]
111228395
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111228395
Nuclear receptors [BR:
sdu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
111228395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111228395
NCBI-ProteinID:
XP_022609962
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPSYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQMTWQAFLQEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHL
SEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatttcagctatgaaagctcaaatcgaaataattccctgcaagatc
tgtggagacaaatcatcaggcatccattacggcgtgataacatgtgaaggatgtaagggc
ttcttcaggaggagtcagcagagcaatgcagcctactcctgcccccgtcagaagaactgc
ctgatcgaccgcaccagccgcaaccgctgccagcactgccggctgcagaagtgcctggca
gtgggcatgtcacgagatgcggtgaagtttggccgcatgtcgaagaagcagcgagacagc
ctgtatgctgaggtccagaagcaccggctgcagcagcaacagcgtgaccaccaacaacag
cctggggaggcggagccactcacacctagctatggcctctcagccaatggcctcacagag
ctccatgacgacctcagcggctacatggacggtcacaccccagatggcagcaaaccagac
tctgcggtcagcagcttctacctggacatccagccatctcctgaccagtcaggcctggac
atcaacggcatcaagccggagcccatctgcgactttgcccccggctctggcttcttccct
tactgctccttcaccaacggagaaacctcccccaccgtgtccatggctgaactagagcac
ctggcccagaacatctccaagtcacacatggagacatgtcagtacctgagggaggagctg
cagcagatgacctggcaggccttcctgcaggaagaggtggagagctaccagaacaagccc
cgggaagtcatgtggcagctgtgtgctatcaaaataacagaggccattcagtatgtggtg
gagttcgccaagcgcatcgacggcttcatggagctgtgtcagaacgatcagatagtgctg
ctgaaagcaggctctttggaagttgtgtttgtcagaatgtgccgtgcctttgactcgcaa
aacaacacagtctattttgatggaaaatatgccggacctgatgtgttcaagtcattaggc
tgtgacgacttgatcagctccgtcttcgagtttgggaaaaacttgtgttctatgcacctg
tctgaggatgagatcgccctgttctccgcctttgtgttgatgtctgctgaccggtcctgg
ctgcaggagaaggtgaaggtggagaaactccagcagaagatccaactggccctccagcac
gtcctgcagaagaaccacagagaggatggtatacttacaaagttgatatgcaaagtgtcg
acactgcgagcgctgtgcagtaggcatacagagaagcttacagctttcaaagcaatatac
ccagacattgtgcgtgcccacttcccccccttatacaaggagctgttcggatcagacttt
gagcagtccatgcccgttgacgggtag
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