Seriola dumerili (greater amberjack): 111228430
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Entry
111228430 CDS
T05606
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111228430
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111228430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
111228430
NCBI-ProteinID:
XP_022610018
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MSTNFFFLSSIFSLQAQKAWIERTFLKRECIHIFPSKDPTRCACGQLTTQHVAIPPGANS
VEETNQLVQIDTPKDKWTVIKYTRTYPTDAFGIIEFQGGGFVNKAMYIRVSYDTKPDNLL
HLMVKDWQLELPTLLISVHGGLQNFDLQPKLKQVFGKGLIKAAVTTGAWIFTGGVNTGVI
RHVGDALKDHSSKSRGKVCAIGIAPWGILENKEDLIGKDVTRPYQTMANPLSKLAVLNNS
HSHFILTDNGTCGKYGSEVKLRRLLEKHISLQKINTRLGQGVPLVCLIVEGGPNVISIAL
ESLRDDPPIPVVVCDGSGRASDIISFAHKFSEDGGLVNDDVRDQLLVTIQKTFNYTKSQS
QQILLMVMECMKKRELITVFRMGSEGQQDIEMAILTALLKGTNASAADQLSLALAWNRVD
IARNHIFVYGHNLPPAGAIASTTTSAAPMQEKQKSPASAPRNKTRAKKGKGKGKAKPEPP
EETDPRKLELIRWVNSLEQAMMDALVLDRVDFVKLLLENGVNIHHFLTIPRLEELYNTKL
GPPNTLHAVVRDVKKGNLPPDYQITLIDIGLVLEYLMGGAYRSNYTRKAFRNLYNNLYGL
KRPKALKLLGMEDDEPRTKGKKKPKKKKEEEVEIDVDDPEVCRFKYPFHELMLWGVLMKR
QKMALFLWQRGEEAMAKALVACKLYKAMAHECSESELVDDISQDLENNSKEFGQLAYELL
DQSYKHDEQVAMKLLTYELVNWSNSTCLKLAVAAKQRDFIAHTCSQMLLTDMWMGCLRIG
KNPGLKVILGIICPPLILLLDFRLGDDHAPGGKEERKDKDDDAKSSKDPNNDTTSRKGDE
EEGSTKVHKIPIGKRFFEFYDAPFTKFWFNTICYLGYLMLYNYIILVKMERWPSLQEWTV
IAYILTLGTEKVRQILMSEPGKLKQKISVWLEEYWNITDLVAISTFLLGLMLRLQHEPYM
GYGRVIYCIDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMMYFVVIMLVVLMSFGVAR
QAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGEHLYDEDGKKLPP
CIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDR
PILPPPLIIFSHLYILFNRLFRRCARKKQEGELDEKDRGLKLRLNPEELKNLYEFEEQCV
EEYFREKEDEQQSSSDERIKVTSERVENMSMRLEEVNERENTMKASLQTVDLRLAQLEEI
HGRMAVALEKLAGVDRLELTRTYSRNSSVCDPSSLLRQGSINSADGYSLYRFHMDMEEYA
SKQKDTDETTKTGLERQRSICTLNTKDGGQTLEVACLERSRPSSCVDILISPCEQKPASA
ASSQETISNIKQGSTLLLDRLTDKNRLKPSSPPKRTKSLRYYPVEDQLTCALTKRRAMST
IIVSPPDEPEEAAEPTKKAQMLLGTSSSPKRTESLRYVPTETQSQTSPITKKRAMSGIVY
NPAEAGDDVLQTADYRSLVEQVTKTPNQWPASLEYQVHPSTFGHIPKVSTVRALAQQFQS
STGPAELKNEENQLDQIPTENKATLPGTEPVEDGAKMKAKRNLSDTTEYLTVADERCLPS
HRSQSWNASERKAKCLMVSKEPRASSSERNLAEVCRVAAVGGEDVGKKIEAEKGEDDAQE
KK
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaacttttttttcctttcttcaattttctctttacaggcccagaaagcctgg
attgagaggacctttcttaaaagagaatgtattcacatatttcccagcaaggacccgacc
agatgtgcctgtggtcagctgacaacgcagcacgtggccatcccccctggtgccaactca
gtagaggaaacaaaccagctggtgcagatcgacaccccaaaggataaatggacggtgatc
aaatataccagaacgtatccaacagatgcttttggcattatcgagttccagggtggagga
ttcgtcaacaaggccatgtacatccgggtttcctatgacaccaagcctgacaacctgctg
catttgatggtgaaagactggcagctggagttgcctacattgctcatctctgttcacgga
ggtctccagaacttcgacctccagcccaaactcaagcaagtgtttggcaaaggcctgatc
aaagctgccgtcaccactggagcctggatcttcacgggcggagtcaacacgggggtgatc
cgtcatgtcggagatgccttaaaggaccattcctccaagtcaagagggaaggtgtgtgca
ataggaattgctccatgggggatcctggaaaacaaggaggacctcatcggaaaagatgtc
accagaccctatcagacgatggcaaacccactgagcaagctggccgtgctcaacaacagc
cactcccacttcatcctgaccgacaacggcacctgcgggaagtacggctctgaggtcaaa
ctacgtcgactgctggagaagcacatctccctgcagaagattaacactcgtttgggtcag
ggggtccccctggtgtgtctgatagtggagggaggtcccaacgtcatctccattgcccta
gagagtctgagagatgatcctcccatccctgtggtggtgtgtgacggcagcggccgagct
tctgacataatttccttcgcacacaagttctcagaggatggaggcctggttaatgatgac
gtcagagaccaactgctggtgactattcagaagactttcaattacaccaaaagccaatcg
cagcagatcctgctcatggtaatggaatgcatgaagaaaagggaactgatcacagttttt
cgaatgggttcagagggacaacaagatattgaaatggccattctcactgccctgttaaaa
ggcacgaacgcttcagcagcagatcagctcagtttggctctggcctggaacagagtggat
attgctcgcaatcacatcttcgtttacggacacaatttaccacctgctggtgccatcgcc
agcactacaacctctgcagccccgatgcaggagaagcagaagagtcctgcaagcgctcct
cgcaacaagacccgggcaaagaaggggaaggggaaaggaaaggcaaaacctgaacctcca
gaggaaactgacccaaggaagctggagttgatccgttgggtgaactctctggagcaggct
atgatggatgctctggtgctggacagagtggactttgtcaaactgctccttgagaatgga
gtcaatattcaccacttcctcaccattcccagactggaggagttatacaacacgaaactt
ggtccgcccaatacactgcatgctgttgttagggatgtcaaaaagggaaaccttcctcca
gattatcagatcactttgattgatattggtctggtgctggagtacctcatgggtggagcg
tacaggagcaattacacaaggaaggctttccgtaacctctacaataatttgtatggacta
aaaaggccaaaagctctaaagcttctaggaatggaggatgatgaacctaggacaaaaggc
aagaaaaagccaaaaaagaaaaaagaagaagaagtggaaattgatgtggatgaccctgag
gtctgtcgattcaagtaccccttccatgagctgatgctgtggggggtgctgatgaagcgc
cagaagatggcgctctttctctggcagcgtggagaagaagccatggcgaaggccctggtg
gcttgtaaactgtataaagccatggcccatgagtgctctgagagtgaactggtggatgac
atttcccaagacctggagaacaactccaaagaatttggccagttggcctacgaactgtta
gaccagtcctacaagcatgatgaacaggtggccatgaaactcttaacatacgagctggtt
aactggagtaactccacctgtctgaagctggctgtggctgctaagcaacgtgactttatt
gcccacacctgcagccagatgttgctaactgatatgtggatgggttgcttaaggatcggc
aagaaccctggcctcaaggtcattctgggaatcatctgtcctcctctgattctattgttg
gatttccgtcttggagatgatcatgcacctggaggcaaagaagagagaaaagacaaggat
gatgacgcaaaatccagcaaggacccaaataatgatacgacttcccgaaagggagatgaa
gaggagggtagcactaaagtccataagatccccattggcaagaggttctttgagttttat
gatgcaccgttcaccaaattctggttcaacactatttgctatctgggctacttaatgttg
tacaactacataatcctcgtgaaaatggagcgatggccatctctacaagagtggactgtc
attgcctacatcctcacacttggcactgaaaaagtcagacagattctgatgtcagagccg
ggaaagttgaaacagaagataagtgtgtggctggaagagtactggaacatcacagacctg
gttgccatttccactttccttcttgggctcatgctacggctgcagcatgagccttacatg
ggctacggcagagtcatctactgtatagacattatcttctggtacattcgtgtccttgac
atctttggagtcaacaaatacctgggaccctatgtgatgatgatagggaagatgatgatt
gatatgatgtactttgtggtgatcatgttggtggtgctcatgagcttcggggtggctcga
caagccatccttcacccagatgaggagccaacgtggcgcctggccagaaacattttctac
atgccctactggatgatctatggagaggtttttgcggactcgatagacctctatgcgatg
gaaatcaaccctccatgtggtgaacatttatatgatgaggatgggaagaaactgcctcca
tgcatccctggcgcctggctcacacctgctattatggcctgctacctccttgtggcaaac
attcttctggtcaatttgctcattgcagtcttcaacaacaccttctttgaagtcaagtcc
atttccaaccaggtgtggaagttccagagatatcagctgatcatgacttttcatgatcgt
cccatcttgcctccacctctcatcatcttcagccacctctacatcctcttcaacaggctg
tttcgacggtgtgccaggaagaaacaagaaggagagctagatgagaaggacagaggcctc
aagcttaggctgaatccagaggagctaaaaaatctgtacgagtttgaagaacagtgtgta
gaggaatatttccgtgagaaagaggatgagcagcagtcctccagtgatgaacgcatcaag
gttacctcagaaagagttgagaatatgtccatgcgtctggaggaggtaaatgagagggag
aacactatgaaggcctccctgcagacagtggatctgcgactggcccaactagaagagatc
catggacgaatggcagtcgccctagaaaagctcgcaggagtggacagactggaactaacc
agaacctattcacgaaactcctctgtgtgtgacccttcctccctccttcgccagggcagt
attaacagtgctgatggttacagcctttaccgcttccacatggacatggaggagtatgca
tcaaagcagaaggacacagatgagacaacaaaaactggtctagagagacagaggagtatt
tgtactctcaacacaaaggatggtggtcagaccttagaagttgcttgtttggagagatcg
cggcccagttcttgtgtggacattctcatatctccatgtgaacaaaagcctgcttctgca
gcatcaagtcaagaaaccataagcaacataaaacaaggcagcacattgctgctagacaga
ctcacagacaagaatagactaaagccttcttcccctccaaaaaggactaaatccttgaga
tactatccagtcgaagaccaactgacatgtgctctgacaaagaggagagctatgagcacc
atcattgtcagccctcctgatgaaccagaggaagcagctgaacccacaaagaaagcccaa
atgctattaggaacctcctcttctccaaagaggactgaatctttgagatatgtccctacc
gaaacccaaagtcaaacttctcctatcacaaagaagagggctatgagcggcatcgtctac
aacccagcagaggcaggtgatgatgtgctgcaaactgcagactacaggtcactggtggag
caagtaactaaaacaccaaatcaatggccagcaagcttggagtatcaggtgcaccccagc
acttttggtcacatacctaaagtatccacagtcagagctcttgcccagcagtttcaaagt
agcactggacctgcagagcttaaaaatgaggagaatcagcttgatcaaattcctacagaa
aataaggcaacccttccaggaacagagcccgtagaagatggagcaaagatgaaggcgaag
agaaacctctcggacactaccgagtatctgactgtagctgatgaaaggtgtttgccgtct
cacaggtcacagagctggaatgccagtgagaggaaggcaaagtgcttgatggttagcaag
gagcccagagcctctagcagtgagagaaaccttgctgaagtctgcagggtggcagctgtt
ggaggggaagatgtgggaaagaagatcgaggccgagaagggagaagatgatgcacaggaa
aagaaatga
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integrated database retrieval system
