Seriola dumerili (greater amberjack): 111228456
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Entry
111228456 CDS
T05606
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111228456 (dennd4a)
Membrane trafficking [BR:
sdu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111228456 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
111228456
NCBI-ProteinID:
XP_022610058
UniProt:
A0A3B4TZV6
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDLSKPLEEELHFDDAGPKSVKPNAPITDVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAPKSQPHTSLAVTDVCIIIPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGATI
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYSEENLSERQRSQLGLPSSDLGP
DGTRSVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHIFHFMQSVPFPST
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYVPP
SDISCVDLDTNTISQKDDKKALTWKILPRRACKYLLNTLNKLYQQLTEGGQLNREDVQME
HTVTDSELNGGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITQAPSEKTTDASSLFDI
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKVDSERPEDTR
LIELDESHRSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLNVELLEPLEGQNPPSAGM
ASRHSSPASPTAIFRRSKQEIKSAQRMAKTYSSMPQMWSKCLLRHCYGLWFICLPGFVGT
CHSKVRALRTAYDVLRRMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVKVLFEMKKAGVQ
PNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVLQFKQAGRKQQTSHRDPQLSD
GSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSKEEERLCG
RESDSTPLVEDKAQSQSTPETEVPISSISPSAKSYKSTDASAGNVDRLVSSPCSDAILCG
VLPKTERPKSLDLSGGQGSLRLTVPHPGAAKQHHVAAERLHGVEEEETETDKQKPLVERS
VSCSDAVERQDFPIERSVSFSGGTVRRTGIEMGFDPLSLMATKAVECDQDNCSTPTTGRN
LAEEIEMYMNNGNSPLSSRTPSMDLQNPSSPLFRSPPSPHTSPRPSTLLRSNTHLPLPVK
PKERLRPSPSLPLGDRERPSSLVSPSSPTPSTSSFSMDSLLTPTLDIFKSSVISAGKGVA
EKASRLYSRLSSQTSLTQDANCDRISVSSLTSGEADCSSLLDNDSCLDPDGFTSPQHGSM
SRLRRSPVVGHTNLGSPSTPNRVFRHNSFSGGLALPSKTPHTPDSSPDTSRFQPTPNYTI
EVLMSSCSLCKTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPFLNVEIKDLRPQSR
SSKQSNPVTEEDTSASLNPEAKMSASDCAAQSPAAPPQKQESSGSAGTAVPASASAPASA
SAPVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDQHPIVFWNLVWYFRRLELPSNLP
ALILASQHCSQGDETPQSVSSEDSKQVLVRIMWDNLKLHQDKVQPCYVLWNTHCANSLVR
SGLCEEGQLFTVELLQGFVRSIKKSDVYQPMSQIIQLLGPELGFKRQRSLYRDLLFLALV
ALGKNNININAFDREYKLAYDRLTPNLVKLTHNCDRPPGAGVMECRRTFREPSL
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagggcctcgtgtagccgactactttgtggttgccggcctcactgac
ttgtccaagcctctggaggaggagctccactttgacgacgccggtcccaagtctgtgaaa
cccaacgcccccatcaccgacgtagctgtggtgatccgctccctgggtgaagaggtaccc
ccgggattcacctgtgtggaaagcactccctcaggcctctctgctgagctcaatggagcc
agcctcaggggcccgcagatcttcctgtgtttcaagcgaggcagagataagcctccactg
acagatcttggggttctgtatgagtggaaagagaagctgaagcctggatgtcacatcgtc
cagaccacgccctcaggtcgccctgccaacatcagcagctcgtcctcccaacgcatctac
atcacctaccgccgtgccccgaagagccagccccacacttcactggctgtcactgatgtc
tgcatcatcatcccaggcaagggggagacaccccctcacaccttctgcaaggtggacaag
aacctcaacagcagcatgtggggatcttcggtctacctttgttacaagaaatctctggct
aaagcaaacacaattgcatacaaagcaggtctgctgtgcaggtaccctgaagaggactac
gagtccttcccactgcctgagtcagtgcctatgttctgcctgcccatgggggctacgatc
gagtgctggccagcgcacaccaaacactccctgcctgttttttccacatttgtgctgaca
ggggcctctggagaaaaggtgtacggagcagccatccagttctatgagccttactcagag
gagaatctgtctgagcgtcagcgctcacagctcggcctgccaagctctgatctcggacct
gacgggaccagaagtgtttacagcaacaagagcatctgtctgctctcccactggcccttc
ttccaatccttcaggagctttctaacgttcctctaccgatactccatctctgggccacat
gctctgcctattgaaaagcacatctttcacttcatgcaaagtgtgccattcccctccact
cagagaccacgcatcctagtgcagctgtctccacatgacagtctgatgctgagccagcct
gtctcctctccgctgcctctcagtggtggaagcctctccacattactgctgaatctgggc
ccgaaaaacgcagccactcttctggtgttggctgttacagagcacaagatcctggttcat
tccttgcgtccagctgtactcaccagtgtcacggaggcccttgtgtctatgatctttccc
ttccactggccgtgcccctacatccctctgtgcccgctggccctggccgatgtgctcagt
gcaccatgtcctttcattgtgggtgtggactccagatactttgacctttacgtgccccca
tctgacatcagctgtgtggatctggacaccaacactatctcccaaaaagacgacaagaag
gctttaacgtggaaaatcttgccgaggagagcctgcaaatatcttctgaataccctgaat
aagctctatcaacagctcactgagggtggtcagctgaaccgtgaagatgtgcagatggag
cacacagtgactgacagtgagctcaacggggggaagagcctccacactctggagctggag
atccaggaggccttcctgcggttcatggcggccatcctacgaggataccgctcctacctg
ctgcccatcacccaagccccctctgagaagaccacagatgccagctctctcttcgacatc
caaggcttcctgaagagcagagaccgctcccatcagaggttttactccctcatgaccaag
actcaaatgttcagccgtttcatagaagagtgctcattcgtcagcgataaagatgctagc
ctggctttctttgatgaatgtgttgataaggtggacagtgagcggccggaggacaccaga
ctgatcgaactggatgaatcccaccgcagtgagcacacagtctatatcaaccctccagag
ctgcctccacttccgcagggagaagagcatcctctgtgctatagctactctggattccct
gtgctgaatgttgagcttctggagccactggagggacaaaatcctccatcagcaggcatg
gcctcgcgccacagcagcccagccagccctaccgccatctttagacgctcgaaacaggag
atcaaatcagctcaaaggatggccaaaacctattcatctatgcctcagatgtggtccaag
tgtctgttgcgccactgctatggcttgtggttcatctgcctgccaggattcgtcgggacg
tgccactctaaggttcgagctctgcgtacagcttacgatgtgctgaggaggatgcaggac
aagaagctacaggctccagatgaggtgtgttaccgtgtgttgctgcagctgtgtggccag
tacagccagcctgtcctggctgtcaaggtgctgtttgagatgaaaaaggctggagttcaa
cccaatgccatcacctatgggtactacaacaaggcggtgctggagagcacctggccctcc
accaccagaggaggctactttctgtggggaaagctgaggaacgtggtcctaggtgtgctc
cagttcaagcaagccgggagaaaacaacagacttctcacagagatcctcagctttcagac
ggcagtgatcttgacacagtcagtcatgggagtttggacagtgctaatgactctgctgag
cgaacctccatcgacactgacttcactaaaatggactccagtgatgatggatttagtaca
ggtggacagtcagaccaaggctacgattcactgtccaaagaggaggagagactgtgcggc
agagagagtgacagcacaccactggtggaagacaaagcacagagccagtccacacctgag
actgaagttccaatcagcagcatatctccttctgctaaaagctacaaatcaacagatgcc
agtgcaggtaacgttgacaggctggtttccagtccatgtagtgatgccattctgtgtgga
gttctgccaaagacagagaggccaaaatctctagacttgtctggtggacaggggagcctg
aggctcaccgtgcctcatccgggcgcagcgaagcagcatcacgtagcggctgagagactg
catggagtagaggaagaggagacagaaactgataaacagaaacctctggtggagaggagt
gtgagctgcagtgatgcagtggagaggcaagacttccccatagagaggagtgtcagcttc
agtggtggaactgtgaggaggacaggtatagagatgggatttgaccccctgtcactgatg
gcaaccaaggcggtagagtgtgaccaggacaactgcagcacacctaccaccggccgcaac
ctcgccgaggagatcgagatgtacatgaataacggcaacagccctctgagcagccgcacg
cccagtatggacctgcaaaacccctcgagccccttgtttcgatcccctccatctcctcac
acctcaccaagaccctccactctactgcgctccaacacacacctcccactgcctgtcaaa
cccaaagagaggctgaggccatcaccctctcttcctctgggtgacagggagaggccttcc
tcattagtgtcaccctcatctcctactccgtccacctcatcgttctccatggactctctc
ctcacaccgactctggacatctttaagagcagcgtcatttcagcagggaagggtgtggct
gagaaggccagccgcctttactctcgtctgtcgtcccagacttcattaacacaggatgca
aactgtgacaggattagtgtatcctcactgacctcaggagaggcagactgctcctcgctt
cttgataatgactcctgtctggacccagacggctttacctcaccccagcatggcagcatg
tcccgactcaggaggagccctgttgtgggccatactaacctgggcagccccagcacaccc
aacagagtgttcagacacaactccttctctggtggtttggcgcttccctctaaaactcct
cacactccagattcctcccccgacaccagccgcttccaacccactcccaattacaccata
gaggtacttatgtccagttgctcgttgtgcaagacgtgtgactgtctggtgtatgatgag
gagatcatggctggctggacagcaaatgactcaaacctcaatagcacttgtcccttctgt
ggcacagccttccttcctttcttgaatgtggaaatcaaagatctgagaccacagagcagg
tcttctaagcaaagtaatcctgttactgaggaggacacgtctgcgtctctcaatcccgag
gccaaaatgtctgcgtcagactgtgcagctcagtcacctgcagctcccccgcagaagcag
gagagcagtgggagtgctgggacagctgtgccagcctcagcctcagccccagcctccgcc
tctgctccggtgacggtgccctacctgagccccctggttctgtggaaggagctggagagc
ctgctggtgaacgagggcgaccaggccatctcctctccgagtgttgttgaccaacacccc
atagtcttctggaacctcgtgtggtacttccgaaggctggagctgccaagcaacctgcca
gctctaatcctggcctcccagcactgtagccaaggagacgagactcctcaaagcgtttca
tccgaggacagtaagcaggtgctggtgaggattatgtgggacaacctgaagttgcaccag
gacaaagttcagccctgctatgtcctgtggaacacacactgtgccaattccctggttcgc
tcggggctgtgtgaagaaggccagctcttcactgtggagctactgcagggttttgtgagg
agcattaaaaagagtgatgtttatcaacccatgagccagatcatccagctgctggggccg
gagctgggttttaagaggcagaggagcctttacagagatttattgttccttgctctcgtt
gccttggggaagaacaacattaatataaatgcttttgaccgggagtacaagttggcatat
gatcgcctcacacccaacctggttaaactgacacacaactgtgaccggccccctggagca
ggggtcatggagtgcaggaggacttttagggagcccagtttgtaa
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integrated database retrieval system