Seriola dumerili (greater amberjack): 111228531
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Entry
111228531 CDS
T05606
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111228531 (rfx4)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Other basic domains
RF-X
111228531 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
111228531
NCBI-ProteinID:
XP_022610195
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNMSNDEHEEKENNRASKPHSTPA
TLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKETSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSPTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITK
QTLYTMEDSQEEHRQLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANDL
MRAMKGEGSTAEREEEFTLTETTATSPSPGSYSPARSVHSVGVSAASSPTAAVSPEYTGV
TATTGAVQSYTWSLTYTVTTAGGSAPEAGQQLSCMRSSAPVPPPSSTHRMPVYTHREEHG
YTGSYNYGSYANQHPHSIQSQYPSLAHEPAIPAPLHYSAYHRSSAQYQLNGQMSRMEPCL
MGSTPRLHPAPVAPRWPDVSPANSCYTSPPMHSSRYATSGDMYSPLGPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgatatggattccacagagagttggattgaaaga
tgcctcaacgagagcgagagcaagcgatactccagtcacacgtctctggggaacatgtcc
aacgatgaacatgaagaaaaagaaaataacagagcctctaaaccacattcaacaccagct
actctggaatggctagaggagaattatgagatagccgaaggtgtgtgtatcccccgaagt
gccctctacatgcattacctagacttcagtgagaagcacgacacacagcctgtgaacgca
gccagctttggaaagatcatacggcaacagtttccagcgttaactaccagacgactgggg
acaagagggcagtcgaaataccactactacggcatagcggtgaaggagacctctcagtat
tatgacgtgatgtactccaaaaagggagcggcgtgggtgaacgagacggggaagaaagag
gtcaccaagcagacagtggcgtattcaccgcgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacctaaatttgcccgccagcctgccagaagagagggtgtcaacc
ttcatcatgatgtacagaacgcactgtcagaggatactggacactgttattcgagccaac
tttgatgaggtccaaagcttcctgctgcacttctggcaggggatgccgccccacatgctc
cctgtcctcggctcccccacggtggtgaacatagtcggtgtttgtgactccatcctctac
aaggccatctctggggtgctgatgcccaccgtcctgcaagcactgcctgatagtttgact
caggttattcgaaaatttgccaaacagcttgatgagtggcttaaaatagcacttcacgac
cttcctgaaaacctgaggaatatcaaatttgaattatcgaggagattttctcagattcta
aagcggcaaacatcattaaatcatctgtgtcaggcgtcacggactgtgataaacagtgca
gacatcacctttcaaatgctggaggactggaggaatgtggacttgaacagcatcaccaag
cagacactttacaccatggaggactcacaagaggagcacaggcagcttattatccacttg
tatcaggagtttgaccgtctactggaggagcagtctccaatcgaggcgtacatcgagtgg
ctggactcgatggtggaccgctgtgttgtcaaggtggcagggaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctgatgtggtcgtgtttcggtaccagagtcatccgg
gatatgaccctccacagcgcgcccagttttgggtccttccatctgatccatctcatgttt
gatgattatgtgctttacctgctggagtccctgcactgccaggagagggccaacgacctc
atgagggccatgaagggcgaaggcagcacagcagagagagaggaggaattcacgctgaca
gaaaccactgccacctccccgtcaccaggatcctactctcccgctcggtcagtccactcc
gtgggcgtttccgcggccagctcccccacagctgccgtgtcccccgagtacaccggagtc
actgccaccacaggcgctgttcagtcatatacctggtcccttacatacacagtgacaaca
gcaggcggctccgctccagaggccggacagcagctgtcctgtatgaggagcagcgctcca
gtccctcctccgtcctccacacaccggatgccagtctacacccacagagaggagcatggg
tatactggtagttacaactatggcagctacgccaaccagcatcctcactccatccagagc
cagtacccgagtctggcccatgagccggcgatcccagcccccctccactactccgcctac
caccgctcgtctgcacagtaccagctcaacggccagatgtctcggatggagccttgcttg
atgggcagcactcctcggctgcaccccgcacctgtcgccccccggtggccagatgtgtca
ccggctaacagctgttacaccagcccacctatgcattcatcccgctatgccacctctggg
gacatgtactctcccctgggaccacgcaggaactcagagtacgaacactcacagcatttc
cccggctttgcctacatcaatggagaggccaccacaggctgggcgaaatag
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