Seriola dumerili (greater amberjack): 111228607
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Entry
111228607 CDS
T05606
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111228607 (chd2)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111228607 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
111228607
NCBI-ProteinID:
XP_022610312
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MIVHASCNFLTVNTRTKDHPISDFQDTTMMKNKNKKQDDEGSAQSNASSNSASEESNHSA
SESGSQSESEHGSERRRSHNSESNSSSESESHSESESESAESKSQQTTSEVKDKPVRKKE
RLADVKKMWEEHPDVYGVRRSNRSRQEPARLNIGAGGSSDSEGDSPKRKPSRAKKKENIW
KDDDSNDEEEEEEEEEEEEASDSTDSEQEEKKVRSRRLPARRPQTKSSTVKKQLSQKGRK
SRKPESSAEEDDDDDDDDDDDDDEEDTPKRQTRRRGATKVKSYKEDQHDFETDSDDLIEM
TGDAGDEQQDDDSETIEKVMDTRIGKKGANGASTTVYSIEENGDPCEGFDPENDEGETQY
LIKWKGWSYIHNTWESMDSLTQQKVKGLKKLDNYKKKSEELNSWLRRASPEDVEFHNCQQ
ELTADLNKQFQIVERVIATKTGKAPGSSDFPSHSHKTPSSNEPEYLCKWMGLPYSECSWE
DGALVIKKFEHCINSFTNRNSNKTVPSKDCKVLKQRPRFVALKKQPSYIGDENLQLRDYQ
LDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSW
QREFDTWAPDMNVVVYLGDVMSRKTIRDYEWVNHQTKRIRFNALLTTYEILLKDKGVLGN
INWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKF
DSWEDFEDEHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQF
YKWILTRNYKALSKGTRGSSAGFLNIVMELKKCCNHSFLIKQPEDVETETQQEHMQSLVR
GSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAKHRYPFQRLDGSIKGEIRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK
QVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGNTNSNPFNKEEL
TAILKFGAEELFKEAEGEESEPQEMDIEEILRLAETRESDQGSSATDELLSQFKVANFSS
MEESTPEFEDKPIREWDDIIPEEQRRKIEEEEKQREMEDIFMLPRSRSSNKRAQANDSDS
DVGSKLKHRSSGSESETDDSDDDKKPKKRGRPRARKNNVEGFTDAEIRRFIKAYKKFGSP
LERLEAIARDSELVDKSIADLKRLGELIHSSCVTAVQEHEEHLKENPVEAKGPGKRRGIN
IKISGVQVNAKSIIQHEEEFEPLHKAVPSNPAERNKFKLTCRVKIAHFDVDWDLQDDIQL
LLGIYEHGFSNWDLIKTDPDLKLADKILPDDPSKKPQAKQLQARAEYLLKLLKKEQDNTD
VPKTGEEVKVKKRKPRVKKENKILKDEQGNDISSPRLSDNPSEEGEVKDDGTDKSPAKKR
QKKKDNKENKEKQGTLKKDGDKEKKGAKPRKEKAKGAKGKKTQGPVHITAGSDPIPIEGK
EDDELDQETFSICKERMRPVKKALKQLDKPDEGLSDQEQLQHTRTCLLKIGDRITECLKA
YSDPEHVKIWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRLHEEEKEQKKKDDPAGRVKS
FRPEPSGSSRDSMGTQPSSKSASHSNQPGPHGHHREPYNAANKRHFGNDDRGDWQRDRKY
NYPSNSNQSWQGDRHHPYDQHRYKDHYGDRRPHGDTYRSSGSYRNNSSPRKRPYEQYSND
RDHRGHRPYYDRHPDPKRRRPDEFRPNYHQGREGPLQDFRRMPEHRPAGPPGSEHYSRPF
HPDKPPPLLDPRSPQAQKSPQDSRSPLERPVEPNAVADPNWNNRKT
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgatagttcatgcttcctgtaactttttgacagtaaataccaggacaaaagatcatcct
atcagcgattttcaggatactacaatgatgaagaataaaaataaaaaacaagatgatgaa
ggatcggctcaaagcaatgcatcaagcaattcagcttcagaagaatccaaccactctgcg
tcggagtcaggaagtcagtcagagagtgaacatggcagtgagaggaggagatcccacaac
tcggagtcaaacagctcctcagagtcagagagtcactccgagtcagagagcgaatctgca
gagtccaaatcacagcagaccacatcagaagtcaaagacaagccagtcagaaagaaggag
cgtctggcagatgtgaaaaagatgtgggaagaacatccagatgtgtatggggtcaggagg
tcaaatcgcagtagacaggagccggctcgtttgaacattggagctgggggtagcagtgac
tctgagggtgacagtcccaagagaaaaccatcacgtgctaagaaaaaggaaaatatctgg
aaagatgatgactcaaatgatgaagaggaggaggaggaggaggaggaggaggaggaggct
tcggacagtacagacagtgagcaggaagagaaaaaagttagatccagacgacttcctgct
agaagacctcagaccaaatcatcaacagtcaaaaagcagctgtctcagaagggaagaaag
tccaggaaaccagagtcgtcggctgaagaagatgacgacgatgacgatgatgatgacgat
gatgatgatgaggaagacactcccaagagacagactcgaagaaggggcgcaacaaaagtc
aaaagttacaaagaggaccaacacgactttgaaacggactctgatgacctgatcgaaatg
acgggggacgcaggcgatgaacagcaggacgatgacagtgagactattgagaaagttatg
gacaccaggataggcaaaaaaggagccaacggggcgtccactactgtgtattctatagag
gaaaatggggacccatgtgaaggctttgaccctgagaatgacgagggtgagactcagtat
ctgattaagtggaagggctggtcctacatccacaacacatgggagagcatggactctctg
acacagcaaaaggtcaagggactaaagaaactggacaactacaaaaagaaaagcgaagag
ctcaattcatggttgaggagggcgtctcctgaggatgtggaatttcataactgtcaacag
gagctcactgctgacctgaacaagcagtttcagatcgtggagcgtgtcatagcaacaaaa
acaggaaaggcaccaggatcctctgactttccctctcatagtcacaagacaccatcctcc
aatgagccggagtatctatgtaagtggatgggcttaccttattctgagtgcagctgggaa
gatggagctttggtcataaagaagtttgagcactgcataaacagcttcacgaaccgaaac
tccaacaaaaccgtcccctctaaagactgcaaggtgttaaagcaaaggccaaggtttgtt
gctctgaagaagcaaccttcgtacatcggagatgagaacctacagctgagagattatcag
ctggatgggttgaactggctggctcactcctggtgcaggtgcaatagtgttatcctcgcc
gatgagatgggactgggaaagaccatccagaccatatccttcctttcctacctgttccac
cagcatcagctgtacggacccttcttattggtggtgcctctgtccacgctcacctcctgg
cagagggagtttgacacctgggccccggacatgaatgtggtggtctacctcggtgatgtc
atgagcaggaaaacgatccgggactacgagtgggtgaaccatcaaacaaaaagaatccgt
ttcaacgcactattaaccacttatgaaattctacttaaagacaagggtgtacttgggaac
attaactgggcgttcctgggtgtagacgaagctcaccggctgaagaatgatgactctctg
ctgtacaaaacattaatggagttcaggtccaaccacagactcctcattactggcactccg
ctgcagaactccctcaaagagctgtggtcacttttgcacttcctcatgcctgacaagttt
gattcctgggaggattttgaggacgaacacgggaaaggaagagaaaatggttatcagagt
cttcacaaggtcctcgagcccttccttctccgacgtgtcaagaaagatgtggaaaaatct
ctgcctgccaaagtggaacagatcctccgtgttgacatgactgcacagcagaaacaattt
tacaagtggattttaacaaggaattacaaagctctttccaaaggcacccgaggcagctcc
gccggcttcctgaacattgttatggagctcaaaaagtgctgcaaccatagtttccttatt
aaacagcctgaggacgtggagacagaaacacaacaggaacacatgcagagtctagtgagg
ggcagtgggaagctggtgctgctggacaaactgctgaccagactcagagaaagaggcaac
cgagtcctgatcttctcccagatggtcaggatgttggacattctggctgaatacctcgcc
aagcaccgctacccgttccagcgattggacggttccataaagggagaaatccgaaagcaa
gcacttgaccactttaatgcagaaggctcagaggacttctgcttcctgttatccaccaga
gctggaggtttagggattaacttggcctcagcagacactgtagtcatctttgactctgac
tggaaccctcaaaacgacctgcaggcacaagccagggctcacaggatcggccagaagaaa
caggtgaatatataccgactggtcaccaaaggaacagtggaggaggacatcattgagagg
gcaaagaagaagatggtattggaccatcttgtcattcagagaatggacaccactggtcga
actgtactggacagcaactcaggaaacactaattcaaacccatttaataaagaagaactg
accgctattctcaagtttggtgccgaggaacttttcaaagaggcagaaggagaggagtca
gagccacaggagatggatattgaggagatcctgaggttggccgaaacaagggaaagtgac
cagggctcgagtgctacagatgaacttctttctcagttcaaggttgccaatttctccagt
atggaagagagcactccagagtttgaagataagcccattcgggaatgggatgatatcatc
cctgaggagcagcgacgcaaaattgaggaggaggagaagcagcgagagatggaggacatc
ttcatgttgcccagaagcaggagctctaacaagagggctcaggccaatgatagtgatagt
gatgtgggctccaagctgaagcaccgctcttcaggctcagagagcgagacagacgatagc
gatgatgacaagaagccaaagaagagaggccgacctcgagcccgcaaaaacaacgtggag
ggtttcactgatgccgagatccgcaggttcattaaggcatacaagaaatttgggtctcca
cttgaaaggttggaggcgatcgcccgagactctgagctggtggacaaatccatagctgac
ctgaagagacttggtgaactgattcatagcagctgtgtgactgcagtgcaggagcacgag
gaacacctcaaagagaacccagttgaagccaaaggtcctgggaaacggcgaggaattaat
atcaagatctctggagtgcaggtcaatgccaagtccatcatccagcacgaagaagagttt
gagccgctgcacaaagcagtgccctccaaccctgctgagagaaataagttcaagctgacc
tgcagggtcaagatagcccactttgatgtggactgggatctgcaggatgacattcagctc
ttgctcggtatctacgagcacggcttcagcaactgggatctgataaagacggatcctgac
cttaaactcgctgataagattctcccagatgacccgagcaagaagcctcaggccaaacag
ttgcaggcgagagctgagtatcttctcaagctgctgaaaaaagaacaagacaatacagac
gtgcctaaaacaggggaggaggtcaaagtgaagaagaggaagccccgagtgaaaaaggag
aacaagattctcaaggatgagcagggcaacgacatctcctccccccgcctgtccgacaac
ccatcagaggagggtgaagtcaaggacgatggaacagacaagtctcccgccaagaagaga
caaaagaaaaaggataacaaagagaacaaagaaaaacagggaacccttaaaaaggacggg
gacaaagaaaagaaaggtgccaagcccagaaaagaaaaggctaaaggagccaaagggaag
aagactcaaggtccagttcacattacggctgggtctgatcccattcccattgaaggaaag
gaggatgatgaactcgaccaggaaaccttcagtatttgtaaggagcgcatgaggccggtg
aaaaaggccctgaagcagctggataaaccagacgagggtctgtccgaccaggagcagctc
cagcacacacgcacatgcctgttgaagattggagaccgaatcacagagtgccttaaagcc
tacagtgacccagaacatgtcaaaatatggcgaagaaacctctggatttttgtgtcaaag
tttacagagtttggtgcaagaaagcttcacaaactttataaaatggcacagaagaagcga
ttgcatgaggaggagaaggagcagaagaagaaggatgatcctgctgggagggtaaaatct
ttcagaccagaaccttctggttctagtcgagactccatgggtacacagccatcctccaaa
tccgcatctcactcgaaccagccaggcccccacggacaccacagggaaccgtacaatgcg
gctaataagcgacactttggcaacgatgatcgaggagactggcagagggaccgtaaatac
aattaccccagtaacagcaaccagtcatggcagggagaccgacatcatccatatgaccag
catcgctacaaggatcactatggtgatcgacgtccacatggagacacgtatcgcagctca
ggcagttaccgcaacaacagctccccccgaaaaaggccgtatgagcagtacagcaatgac
cgggaccacaggggtcacagaccctattatgacaggcatccagaccccaaaagaagacgt
cctgatgaattccgtcccaactaccaccagggacgagaaggccctctccaggacttcagg
aggatgccggagcacaggccagcaggtccacctggatctgagcactacagcaggcccttc
caccctgacaaacctcctccactgttggaccctcgctccccgcaggctcagaagtctccc
caggactcccgctcgccactcgagcgacctgtagagcccaacgctgtggcagacccaaac
tggaacaacaggaaaacataa
DBGET
integrated database retrieval system
