Seriola dumerili (greater amberjack): 111228678
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Entry
111228678 CDS
T05606
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111228678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
111228678
NCBI-ProteinID:
XP_022610404
UniProt:
A0A3B4UYI1
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPPHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGP
TPSSGSWESVSPTSTTTTTFRTPLSTRTTEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtgctgcttctggccctccagctgctggtggtggca
gggctggtacgtgctcagacgtgcccctctgtctgctcctgtagtaaccagttcagcaaa
gtcatctgcacccgccgaggcctgcgggatgtccctgatggcatctctaccaacactcgc
tacctgaatctgcaagagaatctcattcaggtcataaaggtggacagcttcaagcaccta
agacatctggagatcctgcagctgagcaaaaaccacatacgcaaaattgagctgggggcc
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcaccaccatc
ccgaacggcgcatttgagtacctgtccaaactaaaggagctttggttgaggaataacccc
atagagagtattccctcctatgctttcaacagagtgccctcattacggcggttggacctt
ggggagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaatctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaacctaattcccctggtg
aagctggatgaactggagatgtcggggaaccagctcactgtcatccgtcctggctctttt
aaagggctcatccatttgcaaaagctatggatgatgcatgcccagatccagaccatagaa
aggaactcttttgatgacctgcagtcactagtggagctcaatctagcccacaacaacctt
accctcttgccccatgatctcttcactcctttacatcacctggagagggtgcacttgcac
cacaacccgtggaattgtaactgtgacatcctctggctaagctggtggcttaaggagatg
gtaccagcaaacaccagctgctgtgcccgctgcagctcacctccccaccataagggacga
tacattggcgagctggaccagaactactttcactgttatgctcctgttattgtggagcct
cccgcagacctaaatgtgacagagggaagcgctgcagagttgaaatgcagagccagctct
ttgacctcagtaagctggattacacccaatggttccatcatgacacacggtgcgtacaag
gtcagaatctctgtgctgaatgacggcactctgaacttcactaatgttaccatgcaggac
acaggcacatatacgtgtatggtcagtaattcagcaggtaacacgacagcatctgccaca
ctcaatgtgtcctctacagagaacagcagcttcagctacttcaccacagtgacagtggaa
accatagaaacgccacataatgaaggcttcaccacgactgtgcaacagaaggtgggcccc
accccctcttctggatcatgggagtctgtttcacccacctctacaactaccaccacattt
cggaccccgctgtccacccgtaccacagagaagacttacacgatccctgtcacggagctg
ggcggggagggctcactaaacggcctggatgaggtgatgaagacgaccaagatcatcatc
ggctgctttgttgcaatcacactcatggcagccgtcatgctgattatcttctacaagatg
cgcaaacagcaccaccagcagaaccaccacgcacccacacgtactattgagatcattaat
gtggacgaggactgtgtaacaggaggcccgggcatggagggccacctgactctgcctcct
cttgagcatgagcacctcaaccactataacacctataagactgcgtacaaccatgcctcc
actatcaactccatacacagctcagcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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