Seriola dumerili (greater amberjack): 111228782
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Entry
111228782 CDS
T05606
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03010
Ribosome
sdu04120
Ubiquitin mediated proteolysis
sdu04137
Mitophagy - animal
sdu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
111228782
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111228782
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111228782
04137 Mitophagy - animal
111228782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sdu03011
]
111228782
04121 Ubiquitin system [BR:
sdu04121
]
111228782
Ribosome [BR:
sdu03011
]
Ribosomal proteins
Eukaryotes
Large subunit
111228782
Archaea
111228782
Ubiquitin system [BR:
sdu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111228782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
TBK1_ULD
UBL_UBAC1
OTU1_UBXL
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
111228782
NCBI-ProteinID:
XP_022610534
UniProt:
A0A3B4UJC0
LinkDB
All DBs
Position
Unknown
AA seq
132 aa
AA seq
DB search
MIATMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCEKMVCRKCYARLHPRAVNCRKKKCG
HTSNIRPKKKLK
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaacgatgcagatttttgtgaaaacactgacgggtaaaacaattaccctcgag
gtggagcccagtgacactatcgacaatgtcaaagccaaaatccaagacaaagaaggtatc
ccccctgatcagcagcgtctcatctttgctggaaagcagctcgaggatggacgcaccttg
tcggactacaacatccagaaggagtccaccctccaccttgttctgcgtctgagagggggc
atcattgagccatccctgagacagctggctcaaaagtacaactgtgagaagatggtctgc
cgcaagtgctacgctcgtttgcatccgcgtgccgtcaactgtcgcaagaagaagtgcgga
cacaccagcaacatcagacccaagaagaagctgaagtag
DBGET
integrated database retrieval system
