Seriola dumerili (greater amberjack): 111228800
Help
Entry
111228800 CDS
T05606
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04510
Focal adhesion
sdu04512
ECM-receptor interaction
sdu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111228800 (tnn)
04518 Integrin signaling
111228800 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111228800 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sdu00536
]
111228800 (tnn)
Glycosaminoglycan binding proteins [BR:
sdu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111228800 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
Fn3_PBP1
EGF_TEN
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
DUF7949
Arylsulfotran_N
EGF
Motif
Other DBs
NCBI-GeneID:
111228800
NCBI-ProteinID:
XP_022610587
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MTTRLLWRALCLLALLCTISHLSSADNHPDPSAPEQGVTFSHVYKIDIPGSSTCKLERLP
AQDEAGLQTETTTNGENDIIFKHNIRLQTPKCDCEESESFKSLMYRVNGLEEEVNYLKTQ
CTQGCCGRGGAAGVDTSCSGHGTYQHDTCSCLCNPGWEGPDCSVSSCPDECNDNGRCVDG
KCVCHQGYTGDDCSQLMCPDNCNDKGHCVNGKCVCFSHFTGEDCSVQKCPNDCIGNGQCV
DGQCICEEGFYGEDCSLVFGPQGLRVVKVTDISLLVEWESVRGAEHYILTYHPKGDESAL
EQVRIPNTENSYLITGLTPGVTYIVQVYAVIKEVQSEADKIEATTDVSAIDGIRVLGQTE
VSIQVEWKNPPTEVDHFRLTHTDPEGQEEELSVQRSQEARTKHTIVGLYPGTEYLISVQA
IKGTTEGKASSVTGATDIDAPTNLVTTEVTEDTATVSWDRVQAEIEGYMLSYTSAGGSSS
EIPVGRDSTSYKLVGLRPGVLHTVYIWAFKGDKVGRKGSTEAETELDGPTNVLAHDETES
SFSVSWDHSQAEIDGYILTYSSSEGSSEEIPVGSDRTSYNVTGLRPGIIYTVYIWAVKGG
KASRKISTQAETELDAPANLLARDETESSFSVSWDRVQADIDGYILTYSSSEGSSGEIPL
GPDSTSYSLTSLRPGVLYTVYIWAIKGNKASRKISTQAETELDAPANLLARDETESSFSV
SWDRVQADIDGYILTYSSSEGSSGEIPLGPDSTSYSLTSLRPGVLYTVYIWAIKGNKASR
KISTQAETELDAPANLLARDETESSFSVSWDRVQADIDGYILTYSSSEGSSGEIPVGSDS
TSYSLTGLRPAVLYNVYIWAFKGNKASRKISTQAETDIDAPKDLKATDVTPESASLTWVP
PLADIEGYILTYRDEDGNMETVEKQLGASESSFAVSSLEMGKRYIVTIIAYRGSRRSKVV
ETIFKTVGLLYPFPMDCVQIMRNGNKQSGIYIVYINNNQSKPIEVYCDMDTDGGGWLMLQ
RRTTGKLDFMKRWRQYIAGFGNMTDEFWIGLDKIYELTNTPTQYELRFDLGVGSERAYAV
YDNFKIAPVKQKFKLTIGKYSGTAGDAMTYHQGRPWTTVDSDNDIALGNCALTHRGAWWY
KNCHLANLNGKWGDSRHSMGVNWEPWKGHLTSLDFTEMKIRPLGALSSRKRRSLLAREKN
RNMILQKK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagactcctgtggagggccctgtgcctgctggccctgctctgcaccatctca
cacttgagctccgccgacaaccacccagacccctcagccccagagcagggagtcaccttc
agccatgtctataaaattgacatcccagggagctccacttgtaaactagaacgcctgcca
gcccaggatgaagcaggtttgcagacagagaccactacgaatggagagaacgacatcatc
ttcaaacacaacatcaggctacagacgccaaagtgtgactgtgaagagtctgaaagtttc
aagtccttgatgtacagagtcaatgggctggaagaagaagtcaactacttaaagacccag
tgtactcagggctgttgtggaagaggtggtgctgcaggtgtggacacaagctgtagtggc
catggtacctaccaacatgacacctgcagctgcctctgcaacccaggatgggaaggccca
gattgctcagtgtcctcctgcccggacgagtgcaatgacaacggccgatgtgtggatggg
aagtgtgtgtgccatcagggctacacaggagatgactgtagccagctgatgtgtccagac
aattgcaacgacaaaggacactgcgtgaatggaaaatgtgtgtgtttctcacacttcacc
ggcgaagactgcagcgtccagaagtgtcctaatgactgcatcggtaacggccagtgtgtt
gacggccagtgcatctgtgaagaaggcttttatggggaggactgttcattagtcttcggc
ccacagggtctgcgggtggttaaggtgactgacatctctctcctggtggagtgggagtcc
gttcgtggggcagagcattacattctgacatatcatcccaaaggcgatgagagtgccctg
gagcaggttcggattcccaacacagagaactcctacctcatcacaggactgactcctggg
gtcacttacattgtccaggtgtatgcagtcatcaaagaagtccaaagtgaagcagacaag
attgaggctaccacagatgtctcagctattgatggtatccgagttcttggccagacagaa
gtctctattcaggtggagtggaagaacccaccgactgaagtagatcacttcaggctcaca
cacactgacccagaaggacaggaggaagagctgagcgtacagaggagccaggaggcacgc
accaaacacactattgtgggtctgtatccaggaacagagtacctgatctcagtgcaggcc
atcaaaggaacaactgaggggaaggcgtcctctgtcactggtgccacagacattgatgca
ccaacaaaccttgtcaccaccgaggtaacggaggacactgcaacagtctcatgggatcga
gtccaggcagaaatagagggctacatgctgagctacacctctgctgggggctccagctca
gagatccctgtaggccgtgatagcacctcgtacaagctggttggcttgaggcctggagtt
ctccacacggtctacatctgggccttcaagggagacaaagtcggcaggaagggttcaaca
gaagctgaaacagagctggatggccctactaacgtcttggcccatgatgagacagagtcc
agcttcagtgtgtcctgggatcacagtcaggcagaaatcgatggctacatcctaacctac
agctcttctgagggctcaagtgaggaaattccagtgggatctgaccgtacttcttacaat
gtcaccggcctgaggcccgggatcatctacactgtctacatctgggctgtcaaggggggc
aaggccagcaggaagatctcaacacaagctgagacagaactggatgctcctgctaacctc
ttagcccgagatgaaacagagtccagcttcagcgtctcatgggatcgggtccaggcagac
attgatggctacatcctaacctacagctcttctgagggctctagtggggaaatccccctg
gggcctgacagcacctcttacagtctgactagcctgaggccaggagtcctctacactgtg
tacatctgggccatcaaggggaacaaagccagcaggaagatctcaacacaagctgagaca
gaactggatgctcctgctaacctcttagcccgagatgaaacagagtccagcttcagtgtc
tcatgggatcgggtccaggcagacattgatggctacatcctaacctacagctcttctgag
ggctctagtggggaaatccccctggggcctgacagcacctcttacagtctgactagcctg
aggccaggagtcctctacactgtgtacatctgggccatcaaggggaacaaagccagcagg
aagatctcaacacaagctgagacagaactggatgctcctgctaacctcttagcccgagat
gaaacagagtccagcttcagcgtctcatgggatcgggtccaggcagacattgatggctac
atcctaacctacagctcttctgagggctctagtggggaaatcccagttgggtctgacagc
acctcttacagtctgactggtctgaggcctgcagttctctacaatgtctacatctgggct
ttcaaggggaacaaagccagcaggaagatctcaacacaagcagagacagatattgatgcc
cccaaggacctgaaggctacagatgttacaccggagtctgcttctttgacctgggttcct
cctctggccgacattgagggttacatcctcacctacagagatgaggatggcaacatggag
actgttgaaaagcagctgggagccagtgagagcagttttgctgtatccagtctggagatg
gggaagaggtacattgtcaccatcatcgcctacaggggcagcaggaggagcaaggtggtg
gagaccatctttaagacagttggcctcctgtaccccttccccatggactgcgttcagatc
atgaggaatggcaataagcagagcggcatttacatcgtttatatcaacaataaccagtcc
aaacctattgaggtctactgcgacatggacactgatggaggcggctggctgatgctccag
cgtcgtaccactggcaagctggacttcatgaaacgctggagacagtacatagcaggtttt
ggcaacatgacagacgagttctggattggtctggataagatatatgagcttaccaacact
cctactcaatatgagttgcggtttgacttgggcgtgggctcagagagggcatacgctgta
tatgacaacttcaagattgctccagtcaagcagaagttcaaactcactattggcaaatac
agtgggacagcaggtgatgccatgacctaccaccagggccgaccctggactactgtggat
tcagacaatgacatcgccctgggtaactgtgccctgacccaccgtggcgcctggtggtac
aaaaactgtcacctggccaacctgaatggaaaatggggagacagcagacacagtatggga
gtgaattgggaaccatggaagggccacctgacgtccctcgacttcacagagatgaagatc
cgacctttgggagccctgtccagcaggaagagacggtcgttgttggccagagagaagaac
agaaacatgattcttcaaaagaagtaa
DBGET
integrated database retrieval system
