Seriola dumerili (greater amberjack): 111228881
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Entry
111228881 CDS
T05606
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdu03032
]
111228881 (pif1)
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111228881 (pif1)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111228881 (pif1)
DNA replication proteins [BR:
sdu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111228881 (pif1)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
111228881 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
Mg_chelatase
DEAD
AAA_7
AAA_16
RsgA_GTPase
ABC_tran
AAA_5
PhoH
Motif
Other DBs
NCBI-GeneID:
111228881
NCBI-ProteinID:
XP_022610711
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MFAGEDGAQLQCCVAMEQLNASGQATRRQVIRKASVILGRNEFQEIILRVHDGKVPQSYH
LKEFKLFTKFARDGKCTVKLLPENIQVLISNCPPDQLSLFLKTLSIKHQAWRSSKPLSDR
EKLKAGLPRSFEAISPLQQKDIQKVNELRSKAAPKGLTDRTNNTTAARTGQQVKRSRSDS
NFSPVKTNPTKKPILSLPSRKLNKEQAAVLSAVLSGKNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHSFAGVGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEISMVEAQFFDKLESVARSVRRSTEPFGGIQLIVCGDFLQLPPVSKGKEKASFCFQARS
WRKVIQVNMELTEVRRQTDQSFISLLQAVRVGRVTEEVTAKLMESAYHHIERDGILATRL
CTHKDDVELTNESKLQQLPGSVRVFEALDSDLALVKTIDAHSPVSRLIQLKVGAQVMLTK
NLDVARGLVNGARGVVVAFDSGKHGLPRVRFLCGVTEVLKTERWVFKSGGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVVRSDP
DVLLFYKKLRKERLLMQASMDDFVCNKENSW
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccggagaggacggagcccagctgcagtgctgtgtggcgatggagcagctcaac
gcctccggccaggccacccggaggcaggtcatccggaaagcctccgttattctgggccgg
aatgagttccaggagattatcctccgggtccacgacgggaaagtcccgcagagttaccat
ctgaaagaattcaaacttttcaccaagttcgccagagatggtaaatgcaccgtcaaactg
ctccctgaaaacatccaggtgctcatctccaattgcccccctgaccagctgagcctcttc
ctcaaaaccctgagcatcaaacaccaggcctggcggagcagcaagcccctgagcgacaga
gagaagctcaaggccggtcttccccgcagcttcgaggccatcagccccctgcagcaaaag
gacatccagaaggtcaatgagctgagaagtaaagcggctcccaaaggactgacagaccgc
accaacaacacgaccgcggcaagaacaggacagcaagtcaagaggtcaaggagtgacagc
aactttagcccagtgaagacaaacccgactaagaagcccatcctgtctctgccatctcgt
aaactcaataaagaacaggctgctgttctcagtgcggtgctcagcggcaagaacgtcttc
ttcactggaagtgccggaacaggaaagtctttcttactcaagagaatcatgggatcgctt
cctccaaagagcacctttgctacagccagtacaggagtggctgcatgtcacattggagga
acaacattacacagttttgcaggtgttggctcgggctctgccccgctggagcagtgtatt
gagctggctcagaggcccggggtgctgcagcactggaccagctgtcgacacctcatcatc
gatgagatctccatggtggaggcccagttctttgacaagcttgagtccgttgcaaggtcg
gtgaggaggtccactgagccgtttggaggcatccagctgatcgtgtgtggcgacttcctt
cagctgcctccggtttctaaagggaaggagaaggctagcttctgcttccaggcaaggagt
tggcgtaaggtcatccaggtcaacatggagctaacagaagtacgaaggcaaacggaccag
tcgttcatctccctgctgcaggcagtgagggtgggcagggtgacggaggaagttacggct
aagctaatggaaagcgcctaccatcacatcgagagggacggtattctggcaaccaggctg
tgcacacacaaggatgacgtggagctcacaaacgagagcaaactccagcagctgccaggg
tcagtgcgtgtgtttgaggcactcgacagcgacctggccctggtgaagactatagacgct
cacagccccgtcagcaggctgatccaactcaaagtgggagctcaggtcatgctgacaaag
aacctggatgttgctcgaggtctggtgaatggagcacgaggggttgttgtagcttttgat
tctggaaaacatggactcccacgtgtgcgtttcctgtgcggcgttacagaggtgctgaag
acagagcgctgggtgttcaagtccggtggtgggatccatctgagtcgacagcagttgccg
ctcaaacttgcctgggccatctccatccacaagagccagggaatgacactggactgcgtg
gagatctctctggcacgtgtctttgagagcggacaggcctacgtagccttgtctcgagct
cggagcctggagggtctgagggtcatggactttgacccccgtgtggtgcgttcggatcca
gatgttctcctcttctataagaaactgaggaaggagaggctgctcatgcaggcttccatg
gacgattttgtttgcaacaaagaaaactcttggtga
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