Seriola dumerili (greater amberjack): 111228956
Help
Entry
111228956 CDS
T05606
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111228956
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
111228956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111228956
NCBI-ProteinID:
XP_022610801
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MDRNEVSPASAATMKKKAVGGSGFGHISASRSAASKCTRSSSSHNCLDSGSSGAPSGKQP
GVASNVVMDETEDGEEESKFQHPRLRRAGGSGSGGGGGGGRGSIRMKNFTPGGGAASSAS
RRNSNKEPCLTHTEDAPAAPRPTAASRAAETQTPCPGDAALRGETSRASGAEASESPVAA
EVLNATAGDVCNSVAPISSMKCNKNGECRRDSGTGSLRSIISKQEKQTGGSGRAEDGGSA
KRGACNSTTASMDGSITPGGSLSGGHGGDSANPGTTPVSSGVPEKKDSKVSFSNAPSRKA
SSSLHGPTQTQTQQPRNSVTFQKPEDGPPIVPAEDAEPRGSQASFMQRQFSSMLQPGVNK
FSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFK
DETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFIVDFIS
SIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMT
YDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMENDTWSELYSFA
VFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLREEIVNFNCRK
LVASMPLFANAEPNFVTAMLTKLRFEVFQPHDYIIREGTIGKKMYFIQHGVCSVITKGTL
AMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPMMRRAFETVAI
DRLDRIGKKNSILMHKVQHDLNSGVFNNRENEMIQEIVKYDREMVKLVDLQRPRAMSMTP
SIGGIFAPPGQAQTGSAIATLQQAVAMSFCPQMASPLVGPGTLQSPRMVRRFQVMQNLSS
PVSMSPLQSQPPQTLGGAFGSAISSPPVQSPLAASGRTFQYMASAGPSGSQLSLVQHHAP
SPTQTQQRPASHKSTHSLHAGTLSQDTRALSASQPSLPQDGPPQAASAAPSPPPSTRTSN
TSIGPPQPPHPGLPGTSGVGRSAGAQQRVAFASTPPPGGPAGMGAVAAAAGSGPPDSGVP
KKDSIVSLPELDSARSRLSSNL
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaatgaggtgtcaccggcgtctgctgccaccatgaaaaagaaggcggtgggc
ggcagtggattcggccacatcagtgcatcaaggtctgccgcgtccaaatgcacaagaagc
agcagcagccacaattgtctggactccggttcttctggcgcaccgagcggtaagcagccc
ggtgtagccagcaacgtcgtgatggacgagacggaggacggagaagaggagtctaagttt
cagcatccgcggttgcgccgagccggggggagcggcagtggcggaggtggaggaggagga
agaggcagtatcaggatgaagaactttacgccaggagggggagccgcgtcctcggcttcc
aggaggaactccaacaaggagccctgccttacgcacacagaggacgctcctgccgcccca
cggcccactgctgcctccagagctgccgagacccagacaccctgtccgggcgatgctgcc
ctgcgcggcgagaccagcagagcatctggggcggaggcgtcggaatcaccggtcgcggca
gaggttttaaacgcgacagcgggtgatgtttgcaacagcgtcgctccaatttccagcatg
aaatgcaacaaaaacggagaatgcaggagggactcgggtaccgggagcctgcgctcaatc
atctccaagcaggagaagcagacaggagggtcggggagggccgaggacggaggcagcgcc
aagcgaggagcctgtaactcgactaccgccagcatggacggctcgatcacaccaggcggg
tccctgagcggggggcacggaggagacagcgcaaatcccggcactacccccgtgtccagc
ggtgtccccgagaaaaaggactccaaggtgtccttctccaacgcacctagccggaaagcc
tcgtcctcgctgcacggcccgacccagactcagacccagcagcccaggaactctgtcact
ttccagaagccggaggatggaccgccaattgtgcccgccgaggatgcggaacctcggggc
agccaagccagcttcatgcagcggcagtttagtagtatgctgcagcctggagttaacaaa
ttctccttacgcatgtatggtagtcaaaaggcagtggagagagagcaggagagggtaaaa
tcagctgggaattggattatccacccttacagcgatttcaggttctactgggatttcaca
atgttgctgtttatggtgggcaacctgatcatcatccccgtgggcatcaccttcttcaag
gacgagaccaccacgccctggatcatcttcaacgtggtctccgacaccttcttcctcatg
gacctggtgctcaactttcgcactggaatcatcattgaggacaactcagacatcattttg
gaccctaaaaccattaagaagaaatacctaaagacttggttcattgtggacttcatctcc
tccatcccagtggattacatattcctcatagtggagaagggaatcgactcagaggtgtac
aagactgctcgggccctgaggatcgtccgctttaccaagatcctaagtcttttgaggctg
ttgaggctctccagattaatacgctacattcaccaatgggaagagatcttccatatgacc
tatgacctggctagtgcggtgatgcggatctttaacctgattggtatgatgctgctgctg
tgtcactgggacggctgcctacagttcctggttcccatgctgcaggacttcccctcagac
tgctgggtgtccctcaacaagatggagaatgatacctggtcagagctgtactcctttgct
gtattcaaggcaatgagccacatgctgtgcatcggttatggccggcaggccccggaaagt
ctatcagatatctggctcaccatgctgagtatgattgtaggagctacttgctatgctgtt
tttattggccatgcaacagcccttatccagtccctggactcctccagacggcagtatcag
gaaaagtacaaacaagtggagcagtatatgtccttccacaagctgcctgccgacttccgt
cagaaaatccatgattattatgagcacagataccagggcaagatgtttgatgaggagagc
attctgggagaactcagcgagcctctcagagaggaaattgtcaacttcaactgtcgcaag
ctggtggcgtccatgccgctgtttgccaacgcagagccaaacttcgtgacggccatgttg
accaagctgcgttttgaggtgttccagccacacgactacattataagggaggggacaatt
ggaaagaaaatgtacttcatccagcatggagtctgcagcgtcatcaccaagggcacccta
gctatgaaactctctgatggctcttattttggagagatctgtttattgacgaggggtcgg
cgaacagccagcgtacgagcagagacttactgtcgactctattctctctctgttgaccac
ttcaatgaggtgctggaagagtatcccatgatgagacgagcctttgagactgttgccatt
gaccgtctagaccgcataggtaaaaagaactccatcctgatgcacaaggttcagcatgat
ctcaactctggtgtctttaacaaccgggagaatgagatgatccaggagattgtcaagtac
gaccgtgagatggtgaaactggtggacctgcagcggccgcgggccatgtctatgacccct
tccatcggcggcatctttgctccccctggtcaggcgcagacgggctctgctatcgccacc
ctccagcaggctgtggccatgagcttctgccctcagatggcaagtccattggtgggtccc
gggactctgcagtctcctcgtatggtgcgaaggttccaggtgatgcagaacctgtccagc
ccagtctccatgtctcctcttcagtctcaaccacctcagacgctcggaggggcgtttgga
tctgcaatctccagccctcctgtccaaagcccgctcgcagcttcaggacggactttccag
tacatggcgagcgcaggaccctctgggtcccagttgtccctagtacagcaccatgcaccc
agccccacacagacccagcagaggcctgcctcacacaagagcacccactcccttcatgca
ggcaccttgagccaggatacccgggccctgtctgcctcccagccttcactcccccaggac
ggaccaccacaagctgcctctgcagcccccagccctccgccctccacccgcacctccaac
acctccatcggcccccctcagccccctcacccgggcctgcctgggacctcaggggtgggg
agatcagcaggagctcaacagagggtggcctttgcctccacaccgcctcccggtggacct
gctggaatgggggcagtagcagcagctgctggatcaggacctccagactctggagttccc
aagaaagattcaattgtcagccttccagagctagactctgccagatcccggctgtcttcc
aacttgtga
DBGET
integrated database retrieval system
