Seriola dumerili (greater amberjack): 111229245
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Entry
111229245 CDS
T05606
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu02010
ABC transporters
sdu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111229245
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111229245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111229245
Transporters [BR:
sdu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111229245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
111229245
NCBI-ProteinID:
XP_022611207
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFNDAKKILLYTQNDK
SYEGYRGLLRALRKLQKNTAGFKLKDFLQDNETLSHFLHHNASLPRHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADHNVSRMTQEIICKSSSDWLDKAQSHFLSNLDF
LKPIRKDVRSDPKVVQEVSAATDNLLESLGALAVEVASMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSEPLSAYDNSSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMRPKVWNFMENSEEMDLVRTLLQNNASAAFLNTQLSGTEWHVSDVFEFLSKASEDPR
PAGSTYTWRDVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAGI
VFPDIARSNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEHGIIRAITGTKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDP
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KVVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYIEAVFPGQYGIPRPWYFPFTKTYWCGEKENKNISTPLSKKGNAEAVCIEEEPGH
IDPGVYIENLVKVYSHGNKLAVDGLSLRFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQ
IVNDVGLPHKRQSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDY
DLTLQSCRNSASTVCYSKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVP
EARLVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDSVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGT
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALDPSMYGEQFTFISNDIPDDPHTNKLLGALTEKPGFGTRCMEGEPIPDTSCTA
VEDEWSIPQVSQSVKDMFEKGNWTMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQMKI
SDKDTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARNSQLLSNRDEI
DDAIVELRRRFRLERGTAADRFFRSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNN
GILRASLPTGEDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAIEGVVFFCITVLIQYRFCIKARSSTSHLKPIGEEDEDVARERQRILSGGGQSDI
LELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAY
LAGKSVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEALSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDVHLSKRDAVVVDFSQLNSFLTDNKTRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgggtttactgctttggaagaacttcacctaccgacggaga
cagactatccagctgctgattgagatcatctggcccctgttcatcttcttcatcctgatc
tcggtccgaatacattatccgccctacgagcaacatgaatgccatttcccgaacaaggcc
atgccctcagcgggtactctcccctgggtacaaggcatcatctgtaacgccaacaacccc
tgcttccgcaatcctacccctggagagagtcctggggtggtgggaaacttcaatgattct
ataatctcacgtttgttcaatgatgccaagaagatcctgctgtacactcagaacgataag
agctatgagggctacaggggactactgagggccctcagaaaactgcagaagaacactgcc
ggtttcaagctgaaggactttttgcaagacaatgagactctctcccacttcctgcatcac
aatgcctcacttcctcgtcacgcactgaagcagatagtggaggctgacgtcaatcttgag
aaggtgctgactaaaggctttggcttccatctcagagacctctgtaacaccacgccgctg
gaggagtttgtccacattgctgaccacaatgtgtcccgtatgactcaagaaattatctgc
aagtcctccagtgactggcttgacaaggcccagagccacttcctgtccaacttggacttc
ctcaaacccattcggaaggatgtgaggtcagaccccaaagtcgttcaggaggtttcagct
gcaaccgacaatcttctggagagcctgggagctctggccgtggaggtggccagtatgaag
agttggaaggatatgcgaaaggagatcctgtatctaactgcaaatgccacaggctctcca
aaccagatgtaccaggccgtttcacgtatcgtctgcggacaccctgaaggaggtggcctc
aaaattaagtctcttaactggtatgaagacaacaactacaaggccctgtttggaaaccat
ggcaacgacagtgacagtgaacccctctctgcttacgacaactcctcaaccccttattgt
aacaacatgatgcggagcctggagtccagccccatttccaggatgatctggagagctctg
aagccactgctcatggggaagatcctgtacaccccagatactcctgcaacgcagaggatc
atccacgaggttaataagaccttccaggagctcggggttctgagggaccttggagggatg
tgggaggagatgaggcccaaagtttggaacttcatggagaatagcgaggaaatggacctg
gttaggactctgctccagaataacgccagtgctgcattcttaaacacccagctcagtggg
actgagtggcacgtgtcagatgtgtttgaattcctgtccaaggcctcagaggacccaaga
cccgcaggatccacctacacctggagagatgtcttcaacgaaaccgaccaggccatacag
accatctcacgcttcatggagtgcgtgaacctggacaagctggagccggtagctaatgag
gagcgattggtcaacaagtccatgggtctcctggacaaccagaaattttgggcaggaatc
gtgtttcctgacatcgcccgtagcaacagcactgacctgcctcccaatgtcaactataag
atccgcatggacattgataacgtggagaggacgaacaagattaaagatgggtattgggat
cctggtcccagagctgaccccttcgaggaccttcggtacatttggggtggattttcctac
ctgcaggacgtcatcgagcatggaatcatcagagccatcactggcaccaaggagaagacg
ggcatctacattcagcagatgccttacccctgttacgttgatgacatcttccttcgggtg
atgagtcgttcgatgcctctcttcatgaccttggcatggatgtactcagtggccatcatc
atcaagggcgttgtgtacgagaaggaggcacggctcaaggagaccatgaggatcatggga
ctgaacaacggcaccctgtggctcagctggttcatcagcagtttaatcccactgctgatc
agcgcgggcttgttggtgatgttattgaagatgggaaacctgctcccttacagcgacccg
ggtgttgtgtttctattccttggatcattcggcgtagtaaccatcatgcagtgtttcctc
atcagcaccctgttctcgcgtgctaacttggcagctgcctgcggtgggatcatctacttc
accctctacctaccctacgtgctgtgtgtcgcctggcaagactacgttggctttggagca
aaagttgttgtgagtctgctgtctcctgttgcgtttgggtttggctgtgagtactttgcc
ctgtttgaggagcaaggtgtgggtatccagtggtcgaacctgctggccagccctctggag
gaagacagctacaacctgaccacctctatctgcctcatgctgtttgacgccgttctgtat
ggaataatgacctggtacatcgaagctgtgtttcctggtcagtatgggatccccaggcct
tggtatttccctttcactaagacgtactggtgtggggagaaagagaacaagaacatctcc
acccctctgtcaaagaagggcaatgctgaagctgtgtgcattgaggaggaaccgggccac
atcgacccaggtgtctacattgagaatctagtgaaggtctacagccatggaaacaagctc
gctgtagacggactgtccctgaggttctatgaaggacagatcacctccttcctcggacac
aatggagctggcaagaccacaactatgtcaatcctgacggggttgttcccacccacctct
ggtacagcctacatcctcggcaaggacatccgcactgaactgagcaccatccgacagaat
ctgggcgtctgtccccagcacaacgtacttttcagcatgctgacggttgaggaacacatc
tggttctacgcccgtctgaaggggctgccggaggagaaggtgaaggctgagatggagcag
attgtcaacgacgttggactgcctcacaagcgacagtctcgcaccagcaccctgtccggt
gggatgcagaggaagttgtcggtggccctggcttttgttgggggctcaaaggttgtgatc
ctggatgaacctactgctggcgttgacccttatgcacgcaggggaatctgggacctgctg
cttaaatacagacagggccgcaccatcatcctgtccactcatcacatggatgaggctgac
atcctgggtgacagaatcgccatcatttcccacggcaagctgtgctgtgtaggctcctcg
ctcttcctgaagactcacctggggacgggctactacctgaccctggtcaagagagattac
gacctgacgcttcagtcctgcaggaattctgccagcaccgtctgctacagcaagaaaaca
gagaaggaggacagcgtatcagagagcagttcagatgctggtttgggcagcgaaccggaa
agtgaaaccaccactattgatgtctccctcatctccaacgtgatattcaagcatgtccca
gaggctcgcctggtggaggatctcggccatgagctcacctatgtcttgccctaccagtcc
gctaaagatggagcttttgtggagcttttccacgagcttgacgacagactcaccgacctg
ggaatatccagctatggaatatctgataccaccctggaagagattttcctcaaagtggcc
gaggacagtggagtcgactctgttgagctttcagatggagtcgtaccaaccaggactcgt
cgtcgtcatgcctttggagaccaccagagctgcctgaaaccgttcactgaggatgacttc
gatttcaacgactctgaaggtgacccagaatcccgtgagaccgactggctcagcggaaca
gatggcaaaggttcgtaccaggtcaaaggctggagtctgaagagacagcagtttgttgca
ctactctggaaacgatttctctacgctcggcgctccaggaaaggcttctttgctcagatc
gttctccctgcagtgtttgtgtgtattgccctggtgttcagcctgattgttcctcccttt
ggaaagtaccccagtctggctctggatcccagcatgtatggagagcagttcaccttcatc
agtaatgacatacctgacgatcctcacaccaataaactactgggagctctgacagaaaaa
ccaggatttggaacacgctgcatggaaggagagcccataccggacacgtcctgcactgca
gtagaggacgagtggtcgatcccacaagtttctcaaagtgtgaaggacatgtttgaaaaa
ggcaactggaccatggagaatccgtctcccctgtgtgagtgcagctgcgaagggcgcaag
aggatgctgccggagtgtccagctggtgctgggggacttccaccaccgcagatgaagatc
agtgacaaagacactcttcagaatttgactggcagaaacatctcagactatctggttaaa
acctacgcgcagattattggaaagagcctgaagaacaagatttgggtcaacgagttcaga
tacggtggattctcactgggggccaggaattctcagcttctgtccaacagagatgaaatt
gacgatgcaatcgtggagctaaggagacgcttccgcctggagaggggaactgcagcagat
cgtttctttcgcagtctctccagttttatccaaggactggacaccaagaataacgtcaag
atctggtttaacaacaagggctggcacagcatcggctctttcctcaatgtgatgaacaac
ggcatcctgcgggcaagtctgccaacaggggaagaccccacaaagtttggcatcactgcc
tacaatcatccgctcaacctcaccaaggagcagctgtcacaggtcgcattgatgacgaca
tcagtggacgtgctggtgtccatctgcgtgatcttcgccatgtcctttgtcccggccagt
tttgtggttttcctcatccaggagagagtgaacaaggcgaaacacatgcagttcatcagt
ggggtgcagcctttcctctactggctggccaactttgtctgggatatgtgcaactacatc
gtcccggccacattggttatcattatctttgtgtgtttccaacaagacgcctacgtctcc
tccaccaatctgcctgtgctggctctgctgctgctgctctacggatggtcgatcacccct
ctgatgtacccagcctcatttttctttaagatccccagcacggcctatgtggttctgacc
agcgtaaacatattgatcggaatcaatggcagcgtctctacatttgtactggagctgttt
gggagcaatgagatcggtggtatcaacgacatactgaagaacgtgttcctcatcttcccg
cacttctgtctgggcagaggactgattgacatggtgaagaatcaggcaatggctgatgct
ttggaaagattcggtgaaaaccgattccgttcccctctggcctgggacatggtgggaaaa
aacctgtttgcaatggccatagagggcgttgtcttcttctgcatcactgtcctcattcag
taccgcttctgcattaaggccaggtcttccaccagtcatctgaagcctattggagaagaa
gatgaggatgtggccagagagcgacagaggatcctgagtggaggaggacagtcagacatc
cttgagctcaggcagcttaccaagatttacaagcgcaaacagaagccagcagtggaccgg
ctgtgtgttggcatcccccccggagagtgcttcggtttgctgggagtgaatggagcaggg
aaaaccagcacctttaaaatgctgacaggagactctgtggtcaccagtggagaggcctac
ctggctggtaaaagtgtaactacagagatcgatgaagtgcatcagaacatgggctactgt
cctcagtttgacgctatcaatgacctgctgaccggcagagagcatctcgagttctacgcc
atcctgagaggagtgcctgagaaggaagtctgcgaggtggcagagtggggcatccggaag
ctggggttggtcaaatatgtggacaagtcggctggcagctacagtggaggaaacatgagg
aaactgtctactgccatcgctctcataggaggaccacctgttgtgtttctggatgaacca
acgacgggcatggaccctaaagcacgtcgggccttatggaacgccatcctcagcatcatc
aaagagggacgatctgtagtcctgacctctcacagtatggaggagtgtgaagcactttgc
accaggatggccatcatggtcaatggcaggttccgctgtcttggcagcgtacagcacctc
aaaaacaggtttggtgatggctacaccatcatcttgcgggtggcggggccagacccagac
cttcggccagtgatggagttcattgagcgggagctgccaggcagcacactgaaggagaaa
caccgcaacatgctgcagtaccagctgccctcatccctcacctccctcgcccgcatcttc
tccctgctctccaagaacaaggaggcgctcagcatagaggactactcagtctctcagacc
actctagaccaagtgtttgtaaatttcgccaaggaccaaagtgacgaggaccatttgaaa
gacgtccatctgagcaagcgagatgctgtggtagtggacttttcccagctaaactccttc
ctcacggacaacaagacaagggagagttgcgtctga
DBGET
integrated database retrieval system
