Seriola dumerili (greater amberjack): 111229268
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Entry
111229268 CDS
T05606
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04137
Mitophagy - animal
sdu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111229268
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111229268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111229268
03009 Ribosome biogenesis [BR:
sdu03009
]
111229268
04131 Membrane trafficking [BR:
sdu04131
]
111229268
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdu04147
]
111229268
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111229268
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111229268
Membrane trafficking [BR:
sdu04131
]
SNARE
SNARE associated proteins
Others
111229268
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111229268
Exosome [BR:
sdu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111229268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_22
TIP49
Vps4_C
RNA_helicase
AAA_14
AAA_28
NPHP3_N
Parvo_NS1
ATPase_2
DUF815
nSTAND3
Mg_chelatase
AAA_7
AAA_18
IstB_IS21
ABC_tran
AAA_17
ATPase
NACHT
TsaE
AAA_24
ResIII
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
111229268
NCBI-ProteinID:
XP_022611245
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MPGSGGADPKGEDFSTAILKQKHRPNRLIVDEVLSEDSSIVSLSQNKTEELQLFRGDTVV
LRGRKQRQTVCIVLTDDTCGDERIRLNRVTRSNLRVRLGDVISIHACPDIKYGKKIHVLP
IDDTIEGLTGSLFEVFLKPYFLEAYRPVHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLADGVDLERIATETHGHVGADLAALCSEA
ALQAIRKKMTLIDLEDETIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEVPQVSWED
IGGLDEVKKELQELVQYPVEYPEKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGSAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRTSILN
ANLRKSPVARDVDLEYLSDITEGFSGADLTEICQRACKLAIREAIEAEIKAERQRQNRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
ARSGGQGSGPGSGRPNLYREEGNDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaggaggagcagacccaaagggagaagatttctccactgccatcctgaag
cagaaacacagaccaaacagactcattgtggatgaagttctcagtgaggacagcagcatt
gtcagcttgtcacagaataagacagaggagctgcagctcttcaggggggacacagtggtg
ttgagagggcggaaacaacgtcagacggtgtgtatcgtcctgactgatgacacctgtgga
gatgaacggatccggttgaatcgtgtgacgcgcagcaacctgcgtgtccggcttggtgat
gtcatcagtatccatgcctgccctgatatcaagtatggcaaaaagatccatgttctccca
atagatgataccattgagggcctgacagggagcctctttgaggttttcctcaaaccgtac
tttctggaggcttaccggcccgtacacaaaggtgacatcttcctggtgagggggagcatg
cgggcggtggagttcaaggtggtggagacagaccccagcccccactgcatcgttgcccca
gacactgtcatatactgtgagggagaaccaatcaaaagagaggacgaggaggagagcctc
aatgacatcggctacgacgacattggaggctgtcggaagcagctggcacaaatcaaagag
atggtggaacttcctctcaggcacccgggtcttttcaaggctataggggttaagcctccc
agaggcatcctgctgtatggtcctgcaggcacagggaagaccctggtggcccgagctgta
gccaacgaaactggtgccttcttcttcctcatcaatggtcctgagatcatgagtaagctg
gcgggagagtcagagagtaacctaagaaaggcgtttgaggaggcagagaaaaatgctcca
gccatcatctttattgatgagctggatgccatcgctcccaagagagagaagacccacggt
gaagtggagaggcgtatagtgtcccagctcctgaccctgatggatggcctaaagcaaaga
gctcatgtggttgtcatggcagcaacaaaccgacctaacagcgtggaccccgctttgaga
cgttttggcaggttcgaccgagagattgacattggaatcccagattcgactggcagactg
gagatcctgcagatccacaccaaaaacatgaagctggctgacggcgtcgacctggagagg
atcgccacagagacccacggccatgtaggcgctgacctggctgctctttgctcagaagct
gctctgcaagccatccgcaagaagatgaccctcatagacctggaggacgaaactattgat
gctgacctgctcaactcattggctgtcaccatggatgacttccaatgggcgctgagtcag
agcaacccatcagctctgagagagaccgttgcagaggtgcctcaggtcagctgggaggac
atcggaggactggacgaggtcaagaaagaactgcaagagcttgttcagtaccccgtcgag
tatccggaaaagttcctgaagtttgggatgaccccgtctcgtggagtgttgttctacggc
cctccaggctgtgggaaaacccttctggctaaggccattgccaatgagtgccaggcaaac
tttgtctccatcaaaggacctgagatgctcaccatgtggtttggagaatcagaggccaat
gtcagagatgtctttgataaggccagacaggcagccccctgcatcttgtttttcgatgag
ttagactccattgccaaatccagaggaggcagcgctggtgatgcaggtggtgcagccgac
agagtcatcaaccagatactcacagagatggatggcatgtccgacaaaaagaacgttttc
atcattggcgccacaaacagacctgacatcatagactcagccatcctgcggccgggccgt
ttggaccagctcatctacatcccgctcccggacaaaccatctcgcacctccatcctaaac
gccaacctacggaaatctcctgttgcacgagatgtggatctggagtacctgtctgacatc
acagagggtttctctggagctgacctgacagagatctgccagcgggcttgtaagctcgcc
atccgtgaggccatcgaggctgagatcaaggctgagcgtcagaggcagaacagaccaggc
atccccatggatgaggactttgatccagtccctgagatcagaaaggaccactttgaggag
gcaatgcgatttgcccgtcgctctgtcagtgacaatgacatccgcaaatatgagatgttt
gctcaaactctgcagcagagccgaggtttcggaaacttcaggttcccttctgctactggg
gcacggtctggaggtcaggggtctggccccgggtcaggaaggccaaatctgtacagagaa
gaaggcaatgatgacctctatcagtga
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integrated database retrieval system
