Seriola dumerili (greater amberjack): 111229270
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Entry
111229270 CDS
T05606
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111229270 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111229270 (thoc5)
03041 Spliceosome [BR:
sdu03041
]
111229270 (thoc5)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111229270 (thoc5)
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111229270 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
111229270
NCBI-ProteinID:
XP_022611251
UniProt:
A0A3B4ULI4
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSSEALKKRKSKVLRSEGGTPEMKRGRGEGDPQDVRVYSEEVELDGRDPEQDFLQYKESC
ESLATLMSEIQDLKANGAKDGCAEVEQKRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQGAPQEISRPHLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLTLSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLYFYYLMNLNIMTVKTKVSTTTDLSTAISAGDLLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIVSFADYVEELGHPYMWVQSLGGLHFPSDASEGVRVGSSLSASHMESTMKLL
RGRVQSRLALHKQFASLEHSIIPVSSECQHFFPAKIISRLARWTTISDQEYMDLQYTRHV
TEAGLAKETDLYFMAVVERGTARLQAAVVMSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaagctctgaagaagcgaaagtcgaaggttctccgcagtgaaggaggaacc
ccagagatgaagcgaggtcgcggagagggagacccgcaggatgtacgcgtgtacagtgag
gaggtggagctggatggcagggaccctgagcaggactttctgcagtacaaagagtcatgt
gagagtttggctactctcatgagtgagatccaggaccttaaagccaatggagccaaggac
gggtgtgccgaggtcgagcagaaacgtatgcagagctgcatccacttcatgaatctgaag
aaactcaatcgtctggctcatatgcgactaaagagaggcagagaccagacacacgaggca
aagcagaaagtggatgtgttgcaccttcagttgcagaacctgctgtatgaagtgatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaggaaatagacttg
gtgtctgaggaagagttttaccagggggccccacaggagatttccaggccccacctcaca
aaaaatgacccccaccaactcacactggcccgactggactgggagctagaacaaagaaag
aggttggcagagaaatacaaggagtcacaggccacaaaggagaagatccagaagagcatc
gaggtgaagaaggaacacctgagaagcttacagcctggactgaatgccatcatgcaggca
tctctcccagtgcaggagtacctgtccatgccttttgaacagactcagaaacagactgag
attgctcgccatctccctccacctctgtatgtcctgtttgttcaagccaatgcctacggc
caggcctgtgacaaaaacctgactctgtctatcagtggtgatgtggatgaagccaaggcc
ttgtccaaaccaccagaagattcccaggatgatgagagtgattcagatgcagaggaggag
caagagaaaacgaagaggagaaggccaactacaggcggccagctggatgacaagagacgg
gagatgctgaaaaggcaccctctgtctctctgcttagacctcaagtgtaaagatggcagc
atcctccatctctacttctactacctgatgaatctgaacataatgacagtcaagaccaag
gtctccaccaccacagacctaagcacagccatcagcgcgggggacctgctgaaatcagac
actctactcagctgtctctacaccagcgaccagggacgggaaacacccaatccagctaat
cgttaccagtttgataaagtcgggattgtttcctttgctgattatgtggaggagctgggc
catccctacatgtgggttcagagtctgggaggactacattttcccagcgatgcttcagag
ggtgtgcgtgtgggcagttctttgagtgccagccacatggagagcaccatgaagctgctg
aggggacgagtccagtcccgcttggctttgcacaagcagtttgcctctttagagcacagt
atcatcccggtctccagtgagtgtcagcacttctttcctgccaagatcatctcccgctta
gctcgctggacaaccatcagtgaccaggagtacatggatctgcaatatacacgtcatgtg
actgaggctgggctggcaaaggagactgatctgtacttcatggcagtggttgaaagagga
acagctcgtctccaggccgcagtggtgatgagcccccgttacccagagatctctcctctt
ttctccctctccctcagctggaaaggagagcgcagtggacgcaccgatgacaaccttcga
gccatggagagtgaggtcaatgtgttcaaaaatgaactacagggaccacgtccaggacac
cagctcctgaccaatcagatttcacgcttgtgtgtctgcctggatgtgtatttggagact
gaaggacaagatgacagtgtggagggaccacgagagttcccccgtgaaaagatgtgcttg
cgcactgtcaggggtccaaatcgtctgaagccattcaagtacaaccatcctcagggcttc
ttcagtcatcgctaa
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integrated database retrieval system
