Seriola dumerili (greater amberjack): 111229512
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Entry
111229512 CDS
T05606
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04150
mTOR signaling pathway
sdu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111229512 (lrp6)
04150 mTOR signaling pathway
111229512 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111229512 (lrp6)
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111229512 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
111229512
NCBI-ProteinID:
XP_022611572
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MGVVLRSLLLCSFCFLIRGVPLLLYANRRDLRLVDAAHEKANATVVVGGLEDAAAVDYVY
SQGLIYWSDVSEEAIKRTVFNQSGASTVQTVVPGLASPDGLACDWLGRKLYWTDSETNRI
EVAELDGALRKVLFWQELDQPRAIALDPERGYMYWTDWGEVPKIERAGMDGTNRSMIIDK
DIYWPNGLTLDYSQQKLYWADAKHNFIHRSNLDGSSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCRKQTGGEQRVVHSDIFSPMDIHVFSSKRQPNLNSPCSVRNGGCSHLCLL
SPVKPFYQCACPTGVQLLEDGKTCRDGATQMLLLARRTDLRRISLDTPDFTDIILQVDDI
RHAIAIDYDPVEGYIYWTDDEVKAIRRSLPDGSDAQFVVTSQVNHPDGIAVDWIARNLYW
TDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDGM
ERVVMVNTSLGWPNGLALDYDERKIYWGDAKTDMIEVMNMDGSGRRVLVEDKLPHIFGFT
LLGDYIYWTDWQRRSIERVHKRTAEREFIIDQLPDLMGLKATYVHQSFGTNPCADSNGGC
SHLCLYKPQGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPLT
GVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL
YWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAMD
GTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQEREVIADDLPHPFGLT
QYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTNGH
CSHLCLAVPVSSFVCGCPAHFSLNFDNKTCSAPTSFLLFSQKTAINRMVIDEQQSPDIIL
PIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSMTVVSSSVGGASQGLQLYDL
SIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLLER
SPKIERAALDGTEREVLFFSGLGKPVALAIDNEVGKLFWVDSDLRRIESSDLSGANRIVI
ADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHELDM
REYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCTSG
EVDCIPQAWRCDGYAECDDKSDEEDCPVCSESEFQCDSRQCIDLSLRCNGEFNCQDRSDE
NKCEVRCPLDQFTCSNGQCIGKHKKCDNNVDCTDSSDENGCYATEEPPPPPNNTISSIVG
VVMALFVVGAVYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSSSLPGM
SRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQYT
MEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSSTAASAAA
AAKGYTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTD
SS
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgtgctgcggagtctgttgttgtgtagtttttgttttctcatacgaggcgtg
ccgctgctgctgtacgcgaaccggcgggaccttcggctcgtggatgcggcgcacgaaaag
gccaacgccacggtcgtggtgggagggctggaggacgccgccgccgtggactacgtctac
tcccagggcctcatctactggagcgacgtgagcgaggaggccatcaaacgcaccgtcttc
aaccagtccggggccagcacggtccagacggtggtcccgggtctggcctccccggacgga
ctggcctgcgattggttagggaggaaactttactggacggactcagaaaccaatcggatc
gaggtggcggagctggacggcgctctgaggaaggttctgttctggcaggagctggaccag
cccagagccatcgccctggatccagaacgagggtacatgtactggaccgactggggcgag
gtcccgaagatcgagcgcgcggggatggacgggaccaatcgatcgatgatcattgataag
gacatctactggcccaacgggctgacgctggactacagccagcagaaactgtactgggcc
gacgccaagcacaacttcatccaccgctccaacctggacgggtcctccagggaggtggtg
gtgaagggagagctgcctcaccccttcgccctcaccctgtatgaggacacgctgttctgg
accgactggaacacccactccatccactcctgcaggaaacagaccggcggcgagcagaga
gtcgtccactctgacatcttctccccgatggacatccacgtcttcagctccaagagacaa
cccaacttgaacagtccgtgttctgtgaggaacggaggatgttcccacctctgcctcctc
tctccggtgaagcccttctatcagtgtgcctgtcccaccggagtccagctgctggaggac
gggaagacctgcagagacggtgcgactcagatgcttcttctggctcggagaacggacctg
cggcgaatctctctggacacgcccgacttcaccgacatcatcctgcaggtggacgacatc
cgccacgccatcgccatcgactacgacccggtggagggatacatctactggacggacgac
gaggtgaaggccatccgccgctccctccccgacggcagtgatgcccagttcgtggtcacg
tctcaggtcaaccaccccgacggcatcgccgtcgactggatcgcccgaaatctgtactgg
accgacaccgggacggaccgcatcgaggtgacccggctcaacgggaccatgcgcaagatc
ctgatctctgaagacctggacgagcccagagccatcgtgctggaccctgtggccgggtac
atgtactggaccgactggggggaggtgccaaagatcgagcgagccgacctggacgggatg
gagcgggtggtgatggtgaacacgtccctgggctggcccaacggcctcgccctcgactac
gacgagcgcaaaatctactggggagacgccaagacggacatgatcgaggtgatgaacatg
gacgggtcagggagacgggtgctggtggaggacaaacttcctcacatcttcggcttcact
ctgctcggcgactacatctactggacggactggcagcgccgcagcatcgagcgcgtccac
aaacgcaccgccgagcgcgagttcatcatcgaccagctgccggacctcatgggactcaag
gccacatacgtgcaccagtccttcggtacgaacccgtgtgcggacagtaacggcggctgc
agtcacctctgcctctacaagcctcagggcgtccagtgcggctgtcccatcggcctggag
ctcatcgccgacatgaggacctgcatcgtccccgaggccttcctgctcttctcccgccac
accgacatccgccgcatctccctggagaccaacaacaacaacgtggccatcccgctcacc
ggcgtcaaggaggcgtcggcgctcgacttcgacgtcacagacaaccgcatctactggacc
gacatcactctgaagaccatcagccgggccttcatgaacggcagcgctctggagcacgtg
gtggagttcggtctggactaccctgaggggatggcggtggactggctggggaagaacctg
tactgggccgacaccggcaccaaccgcatcgaagtggccaaactggacgggcagcaccgg
caggtcctggtctggaaggacctggacagtcctcgagctctggctctggatcctgctgaa
gggtacatgtactggaccgagtggggcgggaagccgaagatcgaccgggcggcgatggac
gggacggggcgcatcacgctggtggccgacgtgggccgggccaacggactcaccatcgac
tacgcagagcggcgcctgtactggaccgacctggacaccacgctgatcgagtcctccaac
atgctcggtcaggagcgtgaggtcatagccgacgacctccctcacccgttcggcctcacc
cagtaccaggactacatctactggaccgactggagccagcgcagcatcgagcgcgccaac
aagaccagtggtcagaaccgcaccgtcatccagggccacctggactacgtcatggacatc
ctggtgtttcactcgtccagacagggcggctggaacgcctgcgcctccaccaacggacac
tgctcccacctctgcctcgccgtgcccgtcagcagcttcgtctgcggctgccccgcccac
ttctccctcaacttcgacaacaagacgtgcagcgctcccacctccttcctgctgttcagt
cagaaaaccgccatcaaccggatggtgatcgacgagcagcagagtcccgacatcatcctg
cccatccacagcctgaggaacgtccgcgccatcgactacgaccctctggacaaacagctg
tactggatcgactccaagcagaacgtgatccggcgagcgcaggaggacgggaaccagagt
atgactgtggtgtcgagctctgtgggcggagccagccagggcctgcagctgtacgacctg
agcatcgacatctacagccgcttcatctactggaccagcgaggtcaccaacgtcatcaac
gtcacccgcacggacggcagcagggtgggtgtggtgctgcggggggagcacgacaagccc
cgggccatcgtcgtcaacccagagagagggtacatgtacttcaccaacctgctggagcgc
tccccgaagatcgagcgggcggcactggacgggacagagcgcgaggttctgttcttcagc
ggtctggggaaacccgtcgctctggccatcgacaacgaggtggggaagttgttctgggtc
gactcagacctgcgccgcatcgagagcagcgacctctccggagccaatcggatcgtgatc
gccgactccaacatcctgcagccggtcgggctgacggtgttcgggaaccacctgtactgg
atcgacaagcagcagcagatgatcgagcgcatcgacaagacgacgcgagagggacgcacc
aagatccaggcgcgcatcgcctacctgagcgacatccacgccgtccacgagctggacatg
agggagtacagtaaacacccgtgtacctgggacaacggcggctgctcacacatctgcatc
gtgaagggcgacgggacgactcgctgctcgtgtcccgtccacctggtgctgctgcaggac
gagctctcctgtggagagccccccacctgctccccggagcagttctcctgcacgtccggc
gaggtggactgcatccctcaggcgtggcgctgcgacggttacgccgagtgcgacgacaag
agcgacgaggaggactgtcccgtctgctccgagtccgagttccagtgcgacagccgccag
tgcatcgacctgagcctccgctgcaacggagagttcaactgtcaggaccgctccgacgag
aacaagtgtgaagtgcggtgtcctctggaccagttcacctgctctaacggacagtgcatc
gggaaacacaagaagtgcgacaacaacgtggactgtacggacagctccgacgagaacggc
tgctacgcgaccgaggagccgcctcctccacccaacaacaccatcagctccatcgtgggc
gtggtcatggcgctgtttgttgtgggcgccgtgtacttcgtgtgtcagcgcgtcctctgt
ccgcagatgaaggacgacggcgagacggtcaccaacgacttcgtggttcacgggccgtcg
tcggtgccgctgggatacgtgccgcacccgagctcgctgtccagctcgctgcccggtatg
tccagagggaagtccgtgattggctcgctcagcatcatgggtgggagcagcggacctccg
tacgaccgagcccacgtcaccggagcgtcgtccagcagctcgtccagcaccaagggaacc
tacttccccccgatcctgaatcctcctccgtctccggccaccgttcgctctcagtacacc
atggagttcggttactcgtccaacagtccctccacacacaggtcctacagttaccggccc
tacacctaccgccactttgccccgcccaccaccccctgcagcactgatgtgtgcgacagc
gactacacacctggacgccgggcgccgctcaagtccagcaccgctgcctctgccgccgcc
gccgccaagggctacaccagcgacctcaactacgactcggagcctttcccgccgccgccg
acgccccgcagccagtacctgtcggcggaggagaactgtgagagctgcccaccgtcgcct
tacaccgagcgcagctactcccaccacctctacccgccgccgccgtcgccctgcacggac
tcctcgtga
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