Seriola dumerili (greater amberjack): 111229550
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Entry
111229550 CDS
T05606
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111229550 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111229550 (myo5c)
04131 Membrane trafficking [BR:
sdu04131
]
111229550 (myo5c)
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111229550 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111229550 (myo5c)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111229550 (myo5c)
mRNA cycle factors
P-body specific factors
111229550 (myo5c)
Membrane trafficking [BR:
sdu04131
]
Others
Actin-binding proteins
Myosins
111229550 (myo5c)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
111229550 (myo5c)
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
111229550 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_22
Myosin_N
nSTAND3
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
111229550
NCBI-ProteinID:
XP_022611627
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MALLELYTEYNRVWIPDPEHVWKSAEIMRDFHFGDNVLELLLEDGTEHYYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQLCSCAHLPEFKNLRLLSAENFQYTCMGGDITIEGVD
DKKDMEETRRTFSLLGLKEDFQADVFRVLAAILHLGNVEVRNSGEDKSSVSPSDPHLAII
CELLGVSAEGLVRWLCHRRIVLVAETVMKPMPKERAVNARDALAKQIYAHLFDCIINRIN
TALKVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGSDKSWLQKLYNYLDSSPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDIMRVSKLPFLANFFQEEEQNPVT
SKGVKVRPARPGVKPANKQLRTSVGDKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEADLADKKQTCKNV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSQRRKYLRVR
EAAIILQQYIRGKRTIRKTVSAAMLKQGWAALVIQRYWRGYRMRQIYQVVRLASVTIQAF
TRGWVARKRYKKMMEEHKAVVLQKYARAWLARRRFQTIRRLVLNVQLSFRVQQLRKKIEE
QSKENRGLVERLTSLANSHSQTVDRLQGLEAQLEKSTSQKATLEAREKKVKEDATLTIAQ
IQKEREVLTLEKQNLEKKFEASTKEAKESFDQIKRNLLDEKENEARLRKIAENSTEIQRQ
DHEKEVQALKEEIKRLKEERVSLHRKIEEGGQVNSDLQEQVIQLSKHVKAIPELRRDLNS
LQNQRNNMDRKMKQQSEQARAKMNEITRQLLGGVVEEEVLLGLTPGDSEKIYDVEDFVAA
FEGLHKATRILENHQREQKEQYETQLEGLQLKVDHLKNENSKLQNLFQEKSSVNEDIRQE
VSRLSSENSVIPELKLQVSELQRQKQELELHVEEQNQELAEKTEEITNILQKKIEEESSQ
RRHFEEKAEELEEVKRELQGQVEDLEEENDHLKRQHLMQNEAKSKMRQETSRLTAENMDF
EEQLDQKDRLIKKLQNHIKSLETSQKAKQTSAPAIPKDYLGMLEYKREDEPRLVQNIILE
LKPKGVVVNMIPGLPAYILFMCIRHADYLNDEAKLKSLMNAIIGAVKKVIMSHHKDFELL
SFWLSNMYQLLNCLKQYSGEEEFMKQNTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQFI
MIMEKALTPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYDDLETYTISSIIQQLSVFHS
TMTQHGMEQGLIKQAVKQLFFLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIDTLRPLSQAAWLLQVNKSTDDDAKEITETCTELNPVQIVKILNSYTPIDDFE
KRVTSSFVRKVQSSLQDREGSTQLMLDTDYHFQVTFPFCPSSQALELLQVPSSLHLGFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactgtacaccgagtacaacagggtgtggattccagatccagaacat
gtgtggaaatcagcagagattatgagagattttcattttggggataatgttctcgaattg
cttcttgaagacggcacagagcactactaccctgttgacccatcaaaaccacaactcccc
cctcttcgcaacccagacatcttggttggggagaatgacctcactgctctcagctacctc
catgaacccgctgttctgcacaatctcaaagtgagatttgtggagtccagaatcatctat
acctactgtggtattatactggtggctgtaaatccctacaaacagctcccgatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacaagaaccagtctattatc
gtcagtggtgaatctggagctggtaaaacagtgtctgctcgatatgctatgaggtacttt
gctgttgtaagcaaatctggcagcaagactcgagttgaagacaaagtcctggcatccaat
ccaataacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgattt
gggaaatacacggaaatcagctttgacaggaggtaccggatcatcggagcaaacatgagg
acctacctcttagagaaatccagggtagtttttcaggcagacaacgagcggaactatcac
attttctaccagctgtgttcctgtgctcacctgccagagttcaagaacctaagactgttg
agtgcagaaaacttccagtatacctgcatgggtggggacatcactattgaaggtgtagat
gacaagaaagacatggaagagactcgccggaccttctcgctgctggggttgaaggaggat
tttcaggcggatgtgttcagagttttggcagccattctgcatttggggaacgtggaggtc
agaaactcaggagaggacaaatcatcagttagtcccagtgatccgcacctggcgatcatc
tgtgagctgctgggtgtgagcgcagaggggttggtgcgttggctgtgccatcggaggatc
gttctggtggctgagacggtgatgaagccgatgcccaaggagcgggcagtaaatgccaga
gatgccctagccaagcagatctatgcccatctctttgactgtatcattaacaggataaat
acggcactaaaggtcccaggaaagcaacatgctttcataggtgtcctggacatttatggc
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactatgcaaatgaaaag
cttcagcagcagtttaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccatggacgctcatagatttctatgacaaccagccagttattgacctgattgaa
gcaaagatgggcatccttgacttgctggatgaagaatgcttgtttcctcagggctctgac
aaaagctggctgcaaaagctgtacaactacctcgactccagtcctctgtttgagaagccc
aggttatcaaatgaggcttttgtgatacaacactttgcagacaaggtggagtatcagtgc
agaggttttcttgaaaagaacagagacactctctatgaagaactagtggacattatgaga
gtcagtaagcttccttttctggccaactttttccaagaggaggagcaaaaccctgtgacc
agtaaaggcgtcaaagtgaggccggccaggcctggggtgaaaccagccaataaacagctg
agaacctctgtgggagataagtttcgcagttccctctccttactgatggaaacactgaat
gcaaccaccccacactatgtgcgctgcattaagccgaacgatgaaaaactcccatttgaa
tatgactccaggagggtggtgcagcagctgcgagcctgcggagtccttgaaactattcgt
atcagtgcacagagctatccgtccaggtggacatacattgagttttacagcagatacagt
atcctaatgtcacatcaggaggcggacctcgctgacaagaaacagacctgcaagaatgtg
ctgcagaggttgattcaggaccccaaccagtacaagtttggtcggacaaagatcttcttt
cgagccggtcaggtagcttatctagagaagctgcgtctggaccgacttcgaggagcctgc
gtaaccatccagaaacacgtccgcgggtggagccagaggaggaagtacctgcgcgttaga
gaggcagccatcatcctccaacagtacatccgtggaaagaggacaatccgtaaaacagtg
agcgctgcaatgctgaagcagggctgggcagcactggtgatccagagatactggagaggt
taccgcatgagacagatctaccaggttgtccgtctggcgtctgtcaccatccaggccttc
acacgtggttgggtagcccgcaaacgctacaagaagatgatggaagagcacaaagccgta
gttctccagaagtatgccagagcatggctggctcgacggcgatttcaaaccattcgtcgg
ctggtgcttaatgtccagctttcgttcagagtgcagcagctcagaaagaagattgaagag
cagagcaaagagaaccgtgggttggtagaaagactgaccagcttggccaacagccactcg
caaactgtggacagacttcagggtctagaggcacagctggaaaaatcaaccagccagaag
gcaactttggaagcaagagagaagaaagtgaaagaagatgctactctgactattgcacag
attcaaaaggagagagaagtactaacccttgaaaagcagaacttggagaaaaagtttgaa
gcttccaccaaagaggccaaagagagttttgatcaaataaaaaggaatcttctggatgaa
aaagaaaatgaagcaaggcttagaaaaattgcagagaacagcactgagatccagagacaa
gaccatgagaaggaggtgcaggctctgaaagaggagattaagagactgaaagaggagaga
gtcagtctgcacagaaagatagaggaggggggccaggtgaactctgacctgcaggaacaa
gtcatccagctctccaagcacgtcaaggccattcctgagctccgcagagacctgaacagc
ctgcagaatcagaggaataacatggaccgaaagatgaagcaacagtcggaacaagcaaga
gctaaaatgaacgagattacaagacaacttcttggtggtgttgttgaagaggaggttctt
ttagggctaactccaggtgattctgagaagatttatgacgttgaagattttgtggcagcc
tttgaaggcctgcacaaagctaccagaatactggaaaaccaccagagggagcagaaagaa
cagtatgagacccaactggagggcttgcaattgaaagtggaccaccttaaaaatgagaac
agcaagctccaaaacctgttccaggaaaaaagtagtgtcaacgaggatattcgccaagaa
gtgtccaggctcagcagtgagaattcagttataccagagctgaaacttcaggtttcagag
ttgcaaagacaaaaacaagagctggagctccacgtagaggagcagaaccaagagctagca
gaaaaaacagaggagatcaccaacattcttcaaaagaaaattgaagaggagagctcacaa
cgcaggcactttgaggagaaagctgaagagctggaggaggtgaagagggagcttcaaggc
caagtagaggatctggaagaggagaatgatcacttgaagagacagcatttgatgcagaac
gaagccaagagcaaaatgagacaggagacgtcacggttaactgctgagaacatggacttt
gaagagcagctcgaccagaaagacagattaataaagaaactccagaatcatataaagagc
cttgagacatcacagaaagccaagcaaacgtctgcgcctgctattcctaaagactacctc
ggcatgttggagtacaagagagaggacgaacccaggcttgttcaaaacatcattctggaa
ctgaagcccaagggtgtggtggtcaacatgatcccgggtctgccagcgtacatcctcttc
atgtgtatccgccacgctgactacctgaacgatgaagccaaactcaagtctcttatgaat
gcaatcattggtgctgtcaaaaaagtcatcatgagtcaccacaaagactttgagttgctt
tccttctggctctcaaacatgtatcagctgctcaactgtctgaagcagtacagcggggag
gaggagttcatgaaacaaaatactccccgccagaaaaagaactgcttgcagaattttgat
ttgtcagaacacagacagatcctcagcgacctggccatccacatctaccatcagtttatc
atgatcatggaaaaggccctgactcctgcgatcgtacccggtatgttggagcacgagagt
ttgcaggggatttctagcatgaagccgacgggcttcaggaagcgttccaacagcatctat
gatgacttagagacctacaccatttcctccattattcagcagctcagtgtctttcactcc
accatgacccagcatggcatggagcagggcctcatcaaacaggctgtcaaacaactgttc
ttcctggtgggtgcgactaccctcaacaacatcatgctccgcaaagatatgtgctcctgc
aggaagggaatgcaaatcaggtgtaacatcagttacctggaggagtggctgaaggagaag
gaactacaaagctctaatgctatcgatactctgaggccgttgtctcaggctgcttggctg
ctgcaagtcaacaaatccacagatgatgacgccaaggagatcactgaaacatgcactgaa
ctcaaccccgttcagattgtcaagattttgaattcatacacacccattgatgattttgag
aaaagggtgacgtcatcatttgtccgcaaagttcagtcatcactacaagatcgtgaaggg
tccacgcagctgatgctggacacagattatcatttccaggtcacgtttcctttctgcccg
tcctcacaggctctggagctgctgcaggtcccgagcagtcttcatctgggctttctgacc
aggatctga
DBGET
integrated database retrieval system
