Seriola dumerili (greater amberjack): 111229558
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Entry
111229558 CDS
T05606
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03022
Basal transcription factors
sdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111229558 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
111229558 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111229558 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111229558 (gtf2h1)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111229558 (gtf2h1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111229558 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
111229558
NCBI-ProteinID:
XP_022611636
UniProt:
A0A3B4V9G2
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
SKVQLQLVLHTGESTTFHFSNESTALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGVNTTDPALYNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYNENVPHNLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSMVVQGVKNPLVDLLSLEDKSLDEGYGVCTTLPSTSNANRTVKES
SNYAIIKRFNHHSAMVLAAGSRKGETPTDQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYEDLQRENRPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIQHEMANYKPNL
TQVLSSTAATSAIAALSTGGILMQAGAQQAINQMVPTEVQGELKHLYVAAGELLRHFWSC
FPVNTPFLEEKVMKMKSNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEEMLQTAYNKFHV
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactatccgaggaggtgctgctggtggtgaaaaaggttcgtcagaggaagcag
gatggcacactttatctgatggctgaacgtatagcctggggtccagagggcaaggaccgc
ttcacagtcagtcacctatatgcagatattcgctgtcagaagatcagcccagatggtaaa
tccaaagttcagctccagctggttcttcacaccggcgagagcaccacattccacttttcc
aatgagagcactgcactcaaagaccgagatgctgctaaggaactgcttcagcagctactg
cccaagttcaagaagaaagccaacaaggaactagaggagaaaaacagaatgcttcaagaa
gatccagtgcttttccagttatataaagatctcgttgtgagccaggtgatcagtgctgag
gaattctgggccaacaggttagggggtgtaaacaccaccgaccccgcactatacaacaac
aaacaggaagtcggcatatctggagcctttctggcagacattagacctcagacagatggt
tgcaatggcttgaggtataatctgacagctgacattattgaatccatcttcagaacatac
cccgcagtgaagcagaagtataatgaaaatgtacctcataacctgacggagaaggagttc
tggacgcgctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatatcttctcagaatgtgccaagcaagatgaaaaggggttaaaatcgatggtggttcaa
ggagtgaagaatcctttggttgacctcctgtcgttagaggataaatcattggatgagggt
tatggagtttgcactacactaccctcaacttccaatgcaaacaggacagtgaaggagagc
agcaactatgccattataaagcggttcaaccatcacagtgccatggtgctggcagcaggc
tcacgcaagggggaaacaccaacagaccaagccagtgaaacaagcagcacagatggaaac
tctagggattctgacttctttcaacctcctgtgaagaaggtgaaattgcaagaagccata
gaatatgaggatctgcaaagggaaaacagaccaaaaacagtcgcattgaacctcaagaag
tctgacaggtatgctcatggtcctgtgccacttcagtcccaacagtatacgacgagccag
gatatcatcaactctgtcaactacattcagcatgagatggccaattacaaacccaacctc
actcaggtgttgtccagcacagcagctacttctgccattgcagcgctctctacaggcggt
atcctcatgcaggcaggagcacagcaagccataaatcagatggtacccactgaggttcaa
ggagagttgaagcatctttatgtagctgctggagagttattgagacacttctggtcctgt
tttcctgtaaatacaccatttctggaggagaaggtgatgaaaatgaagtcaaacctggag
agatttcagatgaccaagcttcgtccttttcaggaaaagatccagcgccagtacttaagt
acaaatctcacagggcacttggaggagatgttgcagacagcctataacaagttccacgtc
tggcaaacccgtagaatgatgaggaaaacctga
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