Seriola dumerili (greater amberjack): 111229597
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Entry
111229597 CDS
T05606
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111229597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111229597
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sdu00537
]
111229597
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
Contactins
111229597
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sdu00537
]
Others
111229597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_4
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
111229597
NCBI-ProteinID:
XP_022611710
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MLHLTLLLHLLVLSLSPADASFHGEVPDFYRDEATGYGPVFEEQPVDTIYPEESPEAKIT
LNCRARANPPAKYKWKLNKMRIDLNEEGSHYSLVGGNLVISNPIKTTHEGNYSCMASNTY
GTVISRVGSVQFGYLDLFSSEERETVKVKEGQGAVLLCAPPPHHPAELSFRWILNEFPTF
IPLDKRRFVSQSNGNLYISKVDSSDTGNYSCIASSPSISKSVFSNYIPLVPQAERPIRKY
PADLNVKFPDTTALVGQNITLECFALGNPVPEIHWKKLDGPMPPNHEMAGAHLHLYNVQF
EDGGTYRCEAVNSRGKDYHTARVSVEAFPEWVEHIISTEKDLGSEYTMSCVASGKPKPRI
HWLKNGEPLDRNEMRFSSLTFDDSGMYQCKAENHHGVIYANAELRVFACAPTFEHNPVKR
VLAAKNGRVVIECRPKAAPKPTFSWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYT
CFAENDRGKANSVGSLLVTESTKITLAPSNADVKVGENAWMQCAASHDPSLDITFIWSLD
GRVIDLHKDGQHYERTPNGSSNGELLIKNVQLKHAGRYSCTAQTPVDNITASAHLVVRGP
PGAPGGVRLINKTDKSVTLQWSRGADNHNPISKYTVQYRDSFSKDVWKNATTSPADVEGN
AETATVVDLFPWTEYEFRVIATNTLGTGEPSSPSPKDKTLEAIPVVAPLDVGGGGGTSRE
LTITWTPVQPQYYYGPNFGYIVAFKPQDEYQWRRVIVADPQANRYVHKESSIPPSTEFQV
KVKAFNSEGEGPYSLTAIIYSAQDAPSEAPVSVDGRALSATEAIVWWLPLLQSNIDGYQV
KYWRNQEDSEGGAQRVVVPGKENHTRLEGMRPDSHYLIEVRGYNSAGYGPPSEHLRIHTK
KPPPSRPPKIIGKKLKGQSVNIAWEHVEPLANEASIDGYKVLYRQQGHSTGTLYTTSRRY
IDLPLPTDGNYVVEVRAHSEGGDGAVARIHITGGSVMAAQSLSVLSLLLVALLCLNL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacctcaccctgctcctccatctcctggtcctctcactctcccctgcagatgca
tcatttcacggggaggtgcctgacttttacagagacgaagccacaggttacgggccggtg
tttgaggagcagccggtggataccatctaccccgaggagtcgccggaggccaaaatcacc
ctgaactgccgggctcgagccaatccacctgccaaatacaagtggaagctaaacaagatg
agaattgatctgaatgaagagggaagccactacagtttagtcggaggcaacttggtcatc
agcaaccccatcaaaaccacacatgaaggaaattactcctgtatggcttccaatacgtac
ggcacagtcatcagccgagtgggctccgtccagtttggatatctcgatcttttctcgtca
gaggagagggagacggtgaaagtcaaagaaggacagggggcagtgctgctctgcgctccc
ccaccacatcatccagccgagctgtcattccgatggatcctcaatgaatttcccaccttc
atcccactggacaagaggcgctttgtctcccagtcaaatggtaacctttatatctccaag
gtggactcctcagacacaggcaactactcctgcattgcgtccagcccgtccatttccaag
agcgttttctccaactacatccccctagtgcctcaggctgaacgtcccatcagaaaatac
ccagctgacctcaatgtcaagttcccagacaccactgctctggtggggcagaacatcacc
ttggaatgtttcgctttggggaaccccgtccctgagatccactggaagaagttagacgga
ccgatgccacccaatcacgagatggcaggggctcacctgcatctgtacaatgtgcagttt
gaagacgggggcacctatcggtgtgaggcagtgaactcgagaggaaaggactaccacact
gcacgtgtgtctgtagaagcttttcctgagtgggtggagcacatcatcagcacagagaaa
gacctcggtagcgagtacactatgtcctgtgtagccagtggcaaacctaaaccacgcatc
cactggctgaaaaatggagaaccgcttgacaggaatgagatgaggttcagcagcttgacg
tttgatgattcagggatgtatcagtgcaaagcagagaatcaccatggagtcatctatgcc
aatgcagagttgcgtgtgtttgcctgcgctcccacgtttgaacacaacccagtgaagaga
gtcctggcagctaaaaatggccgggtggtgatcgaatgtcgacccaaagcagccccgaag
ccaaccttctcctggagcaaagacacagagctgctctccaactctaccagggtgttcatc
tgggaggatgggagcctggagatcctcaacgtgacgcgagcagatgaaggcaggtatacc
tgcttcgcagagaatgaccggggcaaggccaacagcgtcggctctctgttggttacagag
tccacaaagatcaccttggcaccatccaacgctgacgttaaagtgggtgaaaatgcctgg
atgcagtgtgctgcgtcacatgacccctctttggacatcactttcatctggtccctggat
ggcagagtcattgacctacacaaggatggccaacattatgaacgtaccccgaatgggagc
tcaaatggagagctactgattaaaaacgtccagctgaagcatgccgggcgctacagctgc
accgcacagacccccgttgacaacatcacggcctctgcccacctggtcgtcaggggtccc
cccggtgccccaggtggggtgcgactgataaacaaaactgacaagagtgtgacgttgcag
tggagccgtggagcagacaaccacaaccccatctccaaatatactgtccagtacagggac
tccttctcaaaggatgtctggaagaatgccactacgtctcctgcagatgtagagggcaat
gctgagacagccacagtggtggatttgttcccctggacagaatatgagttcagggtgatt
gccaccaacactcttgggacaggagagccaagcagcccgtcacctaaagacaaaaccctg
gaagcaattcctgtggtggcgcccctggacgtcggtgggggcggagggaccagcagagaa
ctgaccatcacatggacgcctgtacagccacagtattactatgggccaaattttggctac
attgtggccttcaaacctcaagacgaataccagtggaggagggtgatcgtagccgaccca
caggccaaccgctatgtccacaaagagtcgtccatccctccttcgacggagtttcaagtc
aaagtcaaagcattcaatagcgaaggagagggaccctacagcctaacggccatcatttac
tctgcacaggatgctccatctgaagctcccgtaagtgttgacggcagagctctctctgcc
acagaagccatcgtgtggtggttgcccctcttacagagcaatattgatggataccaggtg
aagtactggaggaatcaggaagacagtgagggtggggctcagagggtggtggtgcctggc
aaggagaaccacacaaggctggagggtatgaggcccgactctcattaccttattgaggtt
cggggctacaactctgcaggatacgggccacccagcgaacacctccggatccacaccaag
aaacctcctccaagtcgaccccctaaaataataggtaaaaagttaaagggccagtcagtg
aatattgcctgggagcacgtggaaccgctggctaacgaggcatcgatagatggttacaaa
gtgctgtacaggcagcagggccactccacaggaactctgtacacaacaagtaggcggtac
atagaccttcccctgcccacagatgggaactatgttgtggaggtccgggcgcactcagaa
ggaggagatggggctgtggcacgaatccacatcacaggtggaagtgtgatggctgcccag
tctctcagtgtactctccctgctcctggtggctctcctctgcctgaacctctga
DBGET
integrated database retrieval system